Tcly014539.1
Basic Information
- Insect
- Tetragonula clypearis
- Gene Symbol
- TFIP11
- Assembly
- GCA_010645135.1
- Location
- WIUT01022113.1:1-2538[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-102 8.2e-98 328.2 16.6 1 275 394 661 394 661 0.99 2 2 0.072 1.1e+03 -0.3 0.1 244 261 675 692 667 696 0.83
Sequence Information
- Coding Sequence
- ATGTCGGAAGACGAAGTGGAGAGCTTTGAGATCACAGATTACGACcttgaaaatgaattcaatattaatcGTCCCAGACGTAAATTGTCTAAAAAGCAGCAAATGCTTGGCATTTGGGCTGATGATAGCGACGAGGATGAATTGTCTGCCAGGCCGTCGTTCAAAACTTTTGACAAAGGACCAAAGAATTATACAACACCGGTGAATTTTGTAGCGGGAGGCATCCAACAAGCTGGAAAaccaaaagaagaaacagggGACAAAGACGACGATGAAAGCGATAACGAAAGCACAAATAAATCACAAAAGGAATTTCCAAATAGTTCGAGCTCCGAAGATGAAAGGCCAAGTTCCTTACAGCAACGCAcatcattttcattgaatacCGACGGAGACATTGCAGGTTTACGTAAAAAGAAGCATAAAGTAAACCCTTTGTTAATGCAAAGTGGAATGGGAAGTTGGGAAGTTTATACGAAAGGAATTGGAGCTAAGTTGTTGCTACAGATGGGCTTTGAACCTGGAAAAGGATTGGGTAAACAATTGCAAGGTATAAGTGCACCAGTAGAAGCACACCTGAGAAAAGGTAGAGGGGCAATCGGTGCTTATGGTCCGGAGAAAGCTCCTAAGGTtcctgaaaagaaaaaggatgaAGAAACGGAAGAtggaaaagaatcgaaagcCAAGTTATCGCAATGGAGGAAAGGAGATGCAAGcgttgcaaagaaaaaagtaaattatatatatcggAGCGTCGACCAAGTTTTGGAAGATGGGAAACTAAAACCcaataagaaagtaagaatatcaaatgaaatgaGTAGGGTGAAAGTCATAGATATGACTGGACCTGAGCAAAGAATTCTTAGTGGATATCACGCGATAGCTGGTGGCCAACAACGACCCGACGAGAACGTTGTAGTTACCGATAAAAAATCtagaattaattttgcacTGCCAGAACTTCAgcacaatttaaatatacttgtgGATATGTGTGAGCAGgatattatacaaaatgacAGAAGGACACGGCATCTAAGTGACAGGGTAGTTGCGTTAGAAgcagaaaagaagaacttATCTAAAGTCATAGATCAACATGGTCAGTTGATTGACACGTTAGAAAATGTTCTCGCAATTGTTGATAGATTGATGGACGAAACAAATCAATTAACGTTACAAGAAACCGCGGATGCTTTCAAAGATTTGcaagataaatattacgaGGAGTATAAAATGTACGAACTTGGCGAGTTAGCTAGCAGTTTTGTTGGCCCGAAGATAAAGGATTGTTTAGCTAATTGGAATCCATTGATACAGCCGAAACAATGTATCAAACTATTTCATcagtggaaaaatattttagtgaCTGGTACTACCACTCTCCAGACAAGAACTATGCATCCGTACGATCATCTTGTCTGGAATTCGTGGATGCCATCAATCAGAGGTGCTATACAacaATGGATGTGTAGACAACCAGAACCACTAATTGAGTTACTAGAACATTGGATGCCATTGCTTCCGAAATggatattagaaaatattttagatatgcTAATTCTCCCTAAATTAACCTTGGAAGTAGAAGAATGGAATCCTCTTACTGATACAGTGCCTATACATACATGGATTCATCCTTGGATACCACTTTTAAgAGTTCGTTTGGATACTTTGATATATCCAATAATACGACGTAAATTAGGATCCGCATTGGGCGGTTGGCATCCATCTGATAGATCTGCTAGGTTAATGTTACAACCATGGTCTACAGTTTTCGCCAAAGGAGATATGGAAGCTTTCCTAGTAAAGAATATCATACCGAAATTACAAATAGCACTTTCCGAATTCGTTATAAATCCACATCAGCAACACTTAGATCAATGGAACTGGGTGTACGAATGGAAGGAATTAATTCCTTCTCACATAATGGCAGGATTGTTggataaattctttttccctAAATGGTTACAAGTTTTAGCTTTGTGGTTAAATCATTCTCCCAATTATGATCAAGTTACGAATTGGTACATGGGATGGAAAAGTATGTtgagtgaaaaaatattggcCGAACCGTTGGTGAAAG
- Protein Sequence
- MSEDEVESFEITDYDLENEFNINRPRRKLSKKQQMLGIWADDSDEDELSARPSFKTFDKGPKNYTTPVNFVAGGIQQAGKPKEETGDKDDDESDNESTNKSQKEFPNSSSSEDERPSSLQQRTSFSLNTDGDIAGLRKKKHKVNPLLMQSGMGSWEVYTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAHLRKGRGAIGAYGPEKAPKVPEKKKDEETEDGKESKAKLSQWRKGDASVAKKKVNYIYRSVDQVLEDGKLKPNKKVRISNEMSRVKVIDMTGPEQRILSGYHAIAGGQQRPDENVVVTDKKSRINFALPELQHNLNILVDMCEQDIIQNDRRTRHLSDRVVALEAEKKNLSKVIDQHGQLIDTLENVLAIVDRLMDETNQLTLQETADAFKDLQDKYYEEYKMYELGELASSFVGPKIKDCLANWNPLIQPKQCIKLFHQWKNILVTGTTTLQTRTMHPYDHLVWNSWMPSIRGAIQQWMCRQPEPLIELLEHWMPLLPKWILENILDMLILPKLTLEVEEWNPLTDTVPIHTWIHPWIPLLRVRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWSTVFAKGDMEAFLVKNIIPKLQIALSEFVINPHQQHLDQWNWVYEWKELIPSHIMAGLLDKFFFPKWLQVLALWLNHSPNYDQVTNWYMGWKSMLSEKILAEPLVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00223870;
- 90% Identity
- iTF_00873794;
- 80% Identity
- -