Basic Information

Insect: Tetragonisca angustula
Gene Symbol: -
Assembly: GCA_036937485.2
Location: JAWNGG010000375.1:71292-74990[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.16 16 6.6 2.3 1 23 189 211 189 211 0.94

2 18 0.00039 0.038 14.9 1.4 2 23 246 267 245 267 0.98

3 18 8e-06 0.00077 20.2 2.4 1 23 426 448 426 448 0.96

4 18 0.11 10 7.2 0.3 2 23 452 473 451 473 0.95

5 18 0.083 8.1 7.6 5.2 1 23 546 569 546 569 0.94

6 18 0.00044 0.042 14.7 0.7 1 21 575 595 575 599 0.92

7 18 0.0012 0.11 13.4 3.2 2 23 678 699 677 699 0.95

8 18 0.00023 0.022 15.6 4.2 1 23 756 778 756 778 0.96

9 18 0.00029 0.028 15.3 0.7 1 20 783 802 783 804 0.94

10 18 0.049 4.8 8.3 0.6 2 23 815 836 815 836 0.97

11 18 3e-05 0.0029 18.4 0.6 2 23 875 896 874 896 0.97

12 18 2.7e-05 0.0026 18.5 1.6 1 23 901 923 901 923 0.95

13 18 0.00015 0.015 16.2 2.9 1 23 929 951 929 951 0.98

14 18 4.8e-06 0.00046 20.9 0.4 1 23 967 989 967 989 0.95

15 18 3.9e-07 3.8e-05 24.3 0.6 1 23 995 1017 995 1017 0.99

16 18 4.2e-05 0.0041 17.9 0.2 1 23 1023 1045 1023 1045 0.97

17 18 0.00016 0.015 16.2 4.1 1 23 1051 1073 1051 1073 0.96

18 18 0.01 0.98 10.4 0.3 1 20 1079 1098 1079 1100 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.16	16	6.6	2.3	1	23	189	211	189	211	0.94
2	18	0.00039	0.038	14.9	1.4	2	23	246	267	245	267	0.98
3	18	8e-06	0.00077	20.2	2.4	1	23	426	448	426	448	0.96
4	18	0.11	10	7.2	0.3	2	23	452	473	451	473	0.95
5	18	0.083	8.1	7.6	5.2	1	23	546	569	546	569	0.94
6	18	0.00044	0.042	14.7	0.7	1	21	575	595	575	599	0.92
7	18	0.0012	0.11	13.4	3.2	2	23	678	699	677	699	0.95
8	18	0.00023	0.022	15.6	4.2	1	23	756	778	756	778	0.96
9	18	0.00029	0.028	15.3	0.7	1	20	783	802	783	804	0.94
10	18	0.049	4.8	8.3	0.6	2	23	815	836	815	836	0.97
11	18	3e-05	0.0029	18.4	0.6	2	23	875	896	874	896	0.97
12	18	2.7e-05	0.0026	18.5	1.6	1	23	901	923	901	923	0.95
13	18	0.00015	0.015	16.2	2.9	1	23	929	951	929	951	0.98
14	18	4.8e-06	0.00046	20.9	0.4	1	23	967	989	967	989	0.95
15	18	3.9e-07	3.8e-05	24.3	0.6	1	23	995	1017	995	1017	0.99
16	18	4.2e-05	0.0041	17.9	0.2	1	23	1023	1045	1023	1045	0.97
17	18	0.00016	0.015	16.2	4.1	1	23	1051	1073	1051	1073	0.96
18	18	0.01	0.98	10.4	0.3	1	20	1079	1098	1079	1100	0.89

Sequence Information

Coding Sequence: ATGGAGGAGGTAATCGATCAAACTATTGCTACAGAGCAAACATCGGAAGAGTGTCTGAGTCATGAGGAAGAAGACATTAAAGTTATCATACCCATTAACGAAGGAATGTTAAAACACGAAAACCAGGATAACGAGTgtcttgaaaatattacaacggTGGAGcatgattatatattacagcAGGAATGCGTACTATCTAATGCAAATGAACAGGAGCAGGAACAACAACagcatcatcatcattatcaaCATCAACTTACCTCCGGAGAATCGTTTCAACGCGAAGACTACACGGAGTATGTAAATCTTTTGGTAAAAGCAGCGGATGCAACTATAAAACAGGACGAAGCGAAAgatgaagaagagaaattgGATATTACGAACACGGATGTTCAGCCAGAAGCAGATTCTGAGTatcaaaatgaaacgagaagaagTAAACGTAAATTAGTTCGACGAATCTGTGAGACGAAACGGGATTCTGACGaagaaaattactttgaaaatttgaaccTAAGCTCAAGATTGAAGAAAGACCAATCTTCCGATCAatcagagaaaatttttctctgttaTCTGTGCGACAAGGAGTTCTTGTCAAAGAATGTTTTGAAGGAACATATGCATTCGCACGAAGAAGTTCGAAAGGTATTGTCTCTGAAAAGAACACCAGATACGCCACAAAAAGACAGTTACAATGTTGCGAAATCACCTCCGTCGGGTAAAAGATCGAACAAATGCCCATATTGTGGtaaacagtatatatatataacctcGTTTAGTAAACACTTGAAgaaacacgagagagagaaagaggagggaaAAGAAGATTCGATGCCCCTGGAAATATCATTCCACGAGGATGAACATAGTTTAGATCTTGATGATTATAAAGACGCACGTCGAAATTTGAATACCGAGTATCGGAAGAAAGTCAAACAAAAAGAGATGGGCCAAGAGGACCATGGAGAGGAAGAACAAGGGAACAGGGTAAAAGGTTGCaatgatggtggtggtggtggtggtggtggtggtgacgatgacgatgacgatgacgatgacgatgacgatgatgatGGCAATGGCGATGGCGATGGCGATGGCGATGGCGGCGGAGGCggaggaagagaaggaaacaacaataacaacaataatgaTGATAATGTTAACGATGACACCGATGATAACGAATACGATGTCTGTGAGAACGGCAAACGACTGGGCAATTCGAATAGAAAGGAGGAACAGGAAAGCCGCACTGTTCGTACAGAAACATTTGCGTGCGATAAGTgtacaaagaaattttctacgaaacgTAACTTGCGAAAGCACGCCATTTCGCATACTTTTCTCAATTGTAGCATATGCGAAGACGAATTCGATTCACTggagaaattaagaaatcatCGTGCGAAACATGTGGTTGAAGGTGTATTAACTGAGCAGGAGCTCGAGATGGATAAAGAATATGCGATCAAGAAGGAAACTCTTGGCTATGAGATAGAGAATAAAGAAAGCGCAGAAAATGATGATGGGATAAAAGACGAACCAATGGCAGGGTTGTTAGAGATAGAGAATAATTCATCAAAGAAAAACGATAGAAATACAGAGATTCATCGCCATTTGGGGATCAATCACAGCTGTAAGATGTGTTGTCAACAATTCGCAACGAAGGAAATGTTGCAGAAGCATATGGAACAACAACACGAACGTGTGAAAACTTACAAGTGTACGCAATGTAACAAGACATTCGGTAATGAACTTACTTTACGTAATCATCTTATAGCCACTAATCATAAAACTTTCCTTCATGGGCAAGAATATGATCCTAATAAACGGATTAAAAGAGTCGCTGCGAGAGCCGCgcaaaaaattatcgataagaTTAAAACAGAAGATGGTTTGGAAGACTATgacgaggaagaggagaaTAACGATAGAATTAATCGTGTTAATTCTACGGATGGTAATTACACTCGGAATAAGCGAGAAATTTCTTCACAGAGAAGGCATAATTATAAGAAAGAATTGGAATGTGCGAGTTGCAATAAAAGATGCAGTTCAAAGCAATCGTTAACGAAACATATGGAGCAACATGTAAAAGATGAACAACAACGAGTAATCAAGTcggagaaacaaaaacaatCGGCGGAGAAGAAAGAATGGCAAAAAGACTATACCAACGAGAAGATCTATCAGAAAGAGAATAGAGATGACGATTACGATTCGGATTTCGAGAGTGGTTTAGATTGGCCGATGGATAACCACGAGTGCGCAAAGTGCAAAAAACGATACAGCACGAAAAAGTCGTTGTTACGTCATCAATTGTTGCACGAAGAGCCAAATTTCGAGTGTGATATTTGCAATGTCAAGTTCTACCGCAAAGACAAATTGAAAGCTCATTATGATAAGTGTTCAGAGAAGAATCCCGATCAAGTGAGAAAGTGCAACATCTGCGGAGATACGTTTGAGAACAATGAGATTCTACGAGAACACAGATCAAAACATGTTACCGAGGGTATCCTTACGGAGGAAGACTTGAGAGATATCGAGCCGCGACCTGAGGAAAAGAAGCCGGGCGAAAAAATTGGTAGAAAGAGAAGAACTGATATCGTGGGTTTGGAGTGTACGGAATGTAACAAGCAATACACATCGAGAAAAGGGCTTTTACGACATATTCAAGTtcacgaaggaaaaaaataccTGTGCGACATATGcccaaaaaaattttatagaaggGAACATTTAAAGATACATGTAGCCAAACATAATATGATCAAACCATACAAATGTACACGATGCACAAAGCGTTTCATTAAAGAGGAACAGCTAACGAATCATTTGTCAAAACATGATCGAACTTtcaagaaaaacaaagaaacggACAGCTCGAAAAGATTTCTTTGCGAAATCTGTTCAAAGAGTTTCACACAATCGACGACTCTGATCGCACATCTTAGGGCGCATAATGGCATAAAACCATACGTTTGCGAGGTTTGTTCGCGACCGTTCACGACCAACGCTTACTTGAAAATGCACATGAGAACGCATACGCAAGAACGGCCGTATATTTGTCAATATTGTTCGCGAGCATTTGCTAGAGCTGATACGCTCGCAAATCATTTGACTTCCCACACAGGTGAGGCCAAGTATCATTGTAAATACTGTCCAAAAAATTTCCGTCGTTTGAAATCGCTGAAGGAGCACGTTTTCATTCACACTGGTCAAAGACCCTATGCCTGCCCAACCTGTGATCGGCGGTTTAACAACAATGGAAGTCGATACGCTCATAGTAAAAGGTGTAAACAAACTTTTGTGCAAAATCAGAATCGCGCTCAAGCATTGTCGGCGCAAGTACAAACTCAACAAACTCCACATACTCAGCAAACAAGAGTGCTGCAACAAACCACTCTTGAACAAGGGCAAATAGTAAAACCacagaatattaaaactattacCATCACTAAACAACCTGAATCAGTCACCACTCAACAAACGGTTATGCAACTTCAGGAGATATTGATGCCTTTGATCCTTCCTCTTACGGTCACTCTTACTGACGTCGGTGAAGAAGTAATATTACCAGAGGGAACCAAAATATTTACTACGTCATAA
Protein Sequence: MEEVIDQTIATEQTSEECLSHEEEDIKVIIPINEGMLKHENQDNECLENITTVEHDYILQQECVLSNANEQEQEQQQHHHHYQHQLTSGESFQREDYTEYVNLLVKAADATIKQDEAKDEEEKLDITNTDVQPEADSEYQNETRRSKRKLVRRICETKRDSDEENYFENLNLSSRLKKDQSSDQSEKIFLCYLCDKEFLSKNVLKEHMHSHEEVRKVLSLKRTPDTPQKDSYNVAKSPPSGKRSNKCPYCGKQYIYITSFSKHLKKHEREKEEGKEDSMPLEISFHEDEHSLDLDDYKDARRNLNTEYRKKVKQKEMGQEDHGEEEQGNRVKGCNDGGGGGGGGGDDDDDDDDDDDDDDGNGDGDGDGDGGGGGGREGNNNNNNNDDNVNDDTDDNEYDVCENGKRLGNSNRKEEQESRTVRTETFACDKCTKKFSTKRNLRKHAISHTFLNCSICEDEFDSLEKLRNHRAKHVVEGVLTEQELEMDKEYAIKKETLGYEIENKESAENDDGIKDEPMAGLLEIENNSSKKNDRNTEIHRHLGINHSCKMCCQQFATKEMLQKHMEQQHERVKTYKCTQCNKTFGNELTLRNHLIATNHKTFLHGQEYDPNKRIKRVAARAAQKIIDKIKTEDGLEDYDEEEENNDRINRVNSTDGNYTRNKREISSQRRHNYKKELECASCNKRCSSKQSLTKHMEQHVKDEQQRVIKSEKQKQSAEKKEWQKDYTNEKIYQKENRDDDYDSDFESGLDWPMDNHECAKCKKRYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDTFENNEILREHRSKHVTEGILTEEDLRDIEPRPEEKKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEEQLTNHLSKHDRTFKKNKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQTFVQNQNRAQALSAQVQTQQTPHTQQTRVLQQTTLEQGQIVKPQNIKTITITKQPESVTTQQTVMQLQEILMPLILPLTVTLTDVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00215850;
90% Identity: iTF_00983724;
80% Identity: -