Basic Information

Insect: Tetragonisca angustula
Gene Symbol: Hr39
Assembly: GCA_036937485.2
Location: JAWNGG010000060.1:1001141-1005370[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.24 1.5e+03 -1.3 5.1 107 167 25 87 14 98 0.66

2 4 4 2.5e+04 -13.5 17.9 63 129 408 494 280 536 0.56

3 4 3.3e-08 0.00021 21.3 0.0 1 24 603 626 603 645 0.84

4 4 1.2e-71 7.5e-68 230.3 0.1 89 408 662 980 646 980 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.24	1.5e+03	-1.3	5.1	107	167	25	87	14	98	0.66
2	4	4	2.5e+04	-13.5	17.9	63	129	408	494	280	536	0.56
3	4	3.3e-08	0.00021	21.3	0.0	1	24	603	626	603	645	0.84
4	4	1.2e-71	7.5e-68	230.3	0.1	89	408	662	980	646	980	0.81

Sequence Information

Coding Sequence: ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCAGGTCCAGGCCCAGGACCTGGTCCTGGTCCTGGCTGGTGGCCAGCCTCGCAATCCTGGAAGACGAATTCCTGCACCGCCGCCTCCTCATCCACTAGTTCAACCGTTCCAGACAGCCCCGCCTCCGTCTCTGCTTCCTGCACCACCACTACCTCCTCCCTGGCGACCACCACATCGGCCACTTCCTCGACTAGCTGCTGTTCCTCGACCCCTGGCAGTGGACCATCTGCAACGATCACTGCAGTCCGCTCTTCCGAAACAGGAAAGAATGTCTCTGTCACGACGATTAACGTACCCCCTAATCAGGATATGCACGATgGCAAAGGTATATGCAAGTATCTTACCGGTCAAAACGGCGTGACAGTATCCGTAGTGTCAAGCTGTGGCTCCGTACTAGGGTGTGGAAATGCGAATGTCGCGTCAACCACGGGTATTGGCACCAGTACCGGGACGCAGAGTATTGGAATTGGAGTCAACGTCCTCAGCCAGAATACGGCGGATGACGACGCGGAGGACAGTGACGTCGAGATAAGCAAAATCGACTTTCGGGGGGTGAATTTACgtacgaagaagaaacgagatgTATCGGGTAGCCAGAGCGGAGAGAAAATCGGTGATGGAGAGGTCGAAGATGGGAACGGCTGTTACGATGGGAATGACGCGTCTCAACAGCAACCCGAGAGGCCCATGTCGTGGGAAGGAGAACTTTCCGACCAAGAAATGTCTTCCAATACAATTACAAATCAAGATACTCACGAAGATACATCAATGGAGGGTGTTCAAGTGTGTGGCCCAAGTCCGGGACCAATGGAGCAAAAATTTCCGATAAAACCAGAACCAGACTTTCAGTCCAATCCAAGATTCACGTTTGGTTCTTTTCACGATACAGGATTACCTCTGGTTCACGGCCAACAAATACAGCAACAACGCAACATCGAGAATCTTGAGCAGACGCAGCAAAACGATTTGCCTCTTCTCGTAGGAAAATTACTTGGTGGTTATAATAGTTCAACTCCAAATCACAGTCCGGTGTTGAATCCTAGACACCATTTGACAAAGCATAGCCATACAAGATCGCAGGTGCCGTCACCGGACTCGGCGATTCATTCCGCATACAGCGTATTCAGTTCTCCAACGCAAAGTCCTCACGCAGCTCGCCATTCCGCTCTAGGCACGGGAAGTCCAGTCCCGTCTTCGTCGCTGTCCTTGTCGCGACacagttttaataattccacCTCTTCGTTGTCGCTCTCGTTGTCACATTCGCTCTCGAGAAACAATTCGGATGCCTCGAGCAGCTGTTACAGCTACGGCTCTCTTAGTCCACCCACGCATTCGCCCGTTCAACAACCGAGACATCCGCAGCATCATCAGCATCAAGTTGCTCAAGGAAGTCCACTCCATCTACCAACAACGGCCTCTCCCGTCATTGCTCATCACTATTCTTCCTCTGCACCGGGTTCAGAGCTATCTCCAGAAGGACACGCTGCTACAGACGATCAGGAAGACTGCAGAATACCTTCAGCACCGTCTGGAATATCCACGAGACAGCAATTGATTAACAGCCCGTGTCCAATTTGTGGGGACAAGATCAGCGGTTTTCATTACGGGATATTCTCGTGCGAGTCGTGTAAGGGATTTTTTAAACGCACCGTCCAGAATCGAAAGAATTATGTGTGCCTTAGAGGCGCGGGCTGTCCAGTCACCGTCGCTACCAGGAAAAAATGCCCCGCCTGTAGATTTGACAAGTGCCTCAATATGGGTATGAAGCTCGAGGCGATTAGAGAGGATCGCACCAGAGGTGGCAGAAGTACGTACCAGTGCACGTATACTCTTCCAGCAAGTCTTGTCGGTAGTCCCGCGAGTAACATCGCCAACGATAAATTAACTACGGGGGGAAATTGTAGTCCAGCTCCAGCTGGTAACGAACATCACTATCCGGCAAGGCACCACTCGAATCACTCGCACAAAATGCAAGTGGTACCCCAACTTCTACAGGATATCATGGATGTAGAACATTTATGGCATTACAATGACAATGATCGCATGACTGGGATTCAAAATGCAGGGATGAATCCGTCTAGAAACAACGATACAATGTTATTAGGCGTCAGAAGTAGCGGAGGATCTGGAATAGAGAATGACACAGATTCGAGTGTTGAGTGCTCCTCTAATGGAACCACAGGAAATGGCAATCCCAGTAACAGAAGAGACGACAGATCATGCTCTAGTGTTTCAAATGCTGGTAACGAACAATGTGCTGCATCCATTAGTAGCAGTTCTCAAATTAACAATACCAATGGTAATCCAACACAACATCCTGATTTCCTGTCAAACCTCTGCAACATCGCTGACCACCGACTCTACAAAATAGTGAAATGGTGCAAGAGTTTACCATTATTTAAGAACATTTCAATCGATGATCAAATctgtttgttaattaattcctgGTGCGAGCTACTGCTCTTCTCATGCTGTTTTCGCAGCATGAGCACTCCCGGTGAAATTAGAGTGTCTCTCGGCAAGTCGATTACACTAGAACAAGCTAGGCAGCTTGGTTTGGCGACCTGCATTGAGAGGATGCTTGCATTCACTAACAATTTGAGAAGGCTTCGAGTAGATCAATACGAATATGTGGCAATGAAGGTAATAGTACTGTTAACCTCTGATACAAGTGAACTAAAAGAACCTGAAAAAGTTAGAGCATCTCAGGAAAAGGCTTTACAAGCCCTACAGCAATATACTATAGCAAGGTATCCGGAAATGCCTGCCAAATTTGGTGAATTATTATTGAGAATTCCAGATTTACAAAGAACATGCCAGGCAGGAAAGGAATTGTTAAGTGCGAAACGTGCTGAAGGAGAAGGCAGCTCATTTAATTTGTTGATGGAATTGTTGAGAGGAGAtcattga
Protein Sequence: MSEQNGPSEGPGPGPGPGPGPGWWPASQSWKTNSCTAASSSTSSTVPDSPASVSASCTTTTSSLATTTSATSSTSCCSSTPGSGPSATITAVRSSETGKNVSVTTINVPPNQDMHDGKGICKYLTGQNGVTVSVVSSCGSVLGCGNANVASTTGIGTSTGTQSIGIGVNVLSQNTADDDAEDSDVEISKIDFRGVNLRTKKKRDVSGSQSGEKIGDGEVEDGNGCYDGNDASQQQPERPMSWEGELSDQEMSSNTITNQDTHEDTSMEGVQVCGPSPGPMEQKFPIKPEPDFQSNPRFTFGSFHDTGLPLVHGQQIQQQRNIENLEQTQQNDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGTGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPQHHQHQVAQGSPLHLPTTASPVIAHHYSSSAPGSELSPEGHAATDDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPASLVGSPASNIANDKLTTGGNCSPAPAGNEHHYPARHHSNHSHKMQVVPQLLQDIMDVEHLWHYNDNDRMTGIQNAGMNPSRNNDTMLLGVRSSGGSGIENDTDSSVECSSNGTTGNGNPSNRRDDRSCSSVSNAGNEQCAASISSSSQINNTNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00733987;
90% Identity: iTF_00228733;
80% Identity: iTF_01417762;