Tocu020331.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tethea ocularis
Gene Symbol
-
Assembly
GCA_963555595.1
Location
OY741982.1:5567681-5570635[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.0017 0.11 13.5 4.8 1 23 150 173 150 173 0.97
2 16 0.0002 0.013 16.4 1.1 1 23 182 205 182 205 0.96
3 16 0.0043 0.28 12.2 2.4 2 23 218 240 217 240 0.97
4 16 0.0021 0.13 13.2 1.1 1 23 249 272 249 272 0.96
5 16 0.00023 0.015 16.2 1.5 1 23 284 307 284 307 0.96
6 16 0.00015 0.0099 16.8 0.7 2 23 338 360 337 360 0.97
7 16 0.0015 0.097 13.6 1.2 2 23 370 392 369 392 0.96
8 16 0.086 5.6 8.1 1.2 3 19 398 414 396 417 0.92
9 16 0.00058 0.037 15.0 0.4 2 21 422 441 421 444 0.94
10 16 0.17 11 7.2 1.9 3 23 454 475 453 475 0.93
11 16 0.00011 0.0071 17.2 3.5 1 23 480 503 480 503 0.91
12 16 4e-05 0.0026 18.6 1.0 2 23 515 537 514 537 0.96
13 16 3.6 2.3e+02 3.0 2.7 1 23 561 584 561 584 0.92
14 16 0.00075 0.049 14.6 2.0 2 23 618 639 617 639 0.97
15 16 0.0097 0.63 11.1 0.2 1 23 705 727 705 727 0.97
16 16 0.091 5.9 8.0 1.9 1 23 733 756 733 756 0.97

Sequence Information

Coding Sequence
ATGTCAATAAAACAAGAAGAAgatataaaaattgaaaaaaatgagGATCAAAGTGATAAGAAATCACGAAAGGATCCAACATCCTTCCTACCAGATGAACCAATgtcttatgaaataaaaaagaaaaagaagaagaaaaagaaaaagcaaGAAGATCCATTCAAAGACATAGAAGAGAAACAATTAGTCACTATTATTGAGAAAGCGGCATTTGAACCAGATGTTAATattaaagttgaaaatatagAAGTGGAATTGGATTTTAATGATTTTGCCGATAACACGGGCCTTATGGTAGAAGGACCTAACAGTGAAGACAGTCAAGAACCCGAAGTCAAAATAGAACAAAATAATCACGAAGCTGTTTTATTGACATTTGAGAGTGTTATCAATGATAATTCCGTGCTGACTTACGGCCAAGCCGTGCCAACGGAAGTAGCGCCCTCACACGTATGTAAAGTATGCCATCTAGTCTTTCAGTCACCTAAAACATTACGGATGCACCAGAAAAGAAAACACAAGTCATTCAGACGTTACTTTACGCACATATGCAATTACTGTGGAATGTCCTATGAAATGAAGAATAGTTTAGCTGCTCATATTAAAAGGAAACACGGCCCAGACGCATCGCCTGATGATAGTGAGGAAAAAACATGTGAAATATGCGCTTTAGTTTTTAAAGGACATAGTAGGTTACGTATGCATATGAGAAGAAAGCATGGTGCGTTTGAAGATTCCTTTACACACGTCTGTCAGGACTGTGGACTAACTTATGACAAATATAGAAGTCTAATCGTCCATGTACAGAGAAAGcatactgataataaaaaacCAGAGTTGAGCCAATGGTTTAATTGTCCATTCTGCCCGAAGATATTTACAAAAAGGGAGACTTATGTCAGACATGTACAGAGGAAACATAAGATTGATGAGGAAAGTCTGAAGAATGAAGAAGATAAAGCTGCTCAAAAGTTGCTTGATACATATACCAACGAGCAAACTGGTGAAATAACCTGCAAAGAGTGCCCGTTAGTGTTTTCATCTATCAATTTCTTAAAATTGCACATGAGAAGGAAACATAATGCTCTGAAAGAAGATTTCAGATTGAAATGTAGGATTTGTAATTTATCGTATGATAAAATAGAGAGTTTGAAACGACACGTGCGAAGAAAACACGACCAAGGCTCTCATTGTGAGGTTTGTAATAAACAATTTGATACAAGAGAAATGTACTTAAACCATTCTCATGTGCGAGTGATAAAAGAGTGCTCAATCTGTGGCTTGATTTTCGCCTCCCAAGGCGGTTTAGCGAAGCACATAAGGTGTACGCATAAAATCGACACAGTTAAAACAGTCTTCTGCAGCATATGCAACGAAGGTTTCCATGATAAGCGACAGTTGAAACCGCATTTTATGAAAGTGCATTTAAAAGTGTCCTATAATTGTAGATATTGCAAtaaagtatttaaaacaaaagaaacttATAGACGGCATGTTATATTCAAACATCCAACAAATGGTGTTGTCACAGAAAACATGCAAAAATGTGAGCAGTGTCCGGAAACGTTTAAAGACGAATTTGAATTGTGTCGTCATATAAATATAGTCCATGGTAAAGATGGAGATTTAACTAAGCCTCTAattgaaataaagaaagaagaagTAGATATAAAAGATTCATTCCAATGCACAAAGTGTACGGATCATTATTTAACGTGGGAGCAGCTGAAGCTGCATTATGAACAAAACCACCAAACTATTGAAGAAACCCAGTGTCAAATGTGTGGTGAACTTATCCCATGCACCGAATTACAGAAGCACATTAAGAATTTACATACGGACACAACAATGCAGTGTAAATATTGTGAATTTAAAACAACGTCTAGAGTGAGTTTAACTCAGCATATGTTAAGGCATAAGAATGCAGCAACTTTACACTGTGACTATCCGAATTGCAGATACAAGTCGTTTTATGAAGGAGCAATGGAGAAGCATAAGCGGAAACATGCAGACTTGGGTGTGAAATTGCAGTGTACACAGTGTCCGTTCCAATCcatgaataaatatatattgaaGTACCACGAGGAAGCTCATGAGACGGGGAAGAAGCGCTACAGGTGTGACCAATGTGATTATGCAACGATTTTGCCCGCGAACCTAGTTCAACATAAGTATAAGCATTCAACAGAGAAGCGTTTTAAATGTGAAGTTTGTCCATTTGCAACGAAATACAATACCTCGTTGCGGTTTCATGTTAGAAAGAAACACTGTGATCTCCCTACTTTCAgttga
Protein Sequence
MSIKQEEDIKIEKNEDQSDKKSRKDPTSFLPDEPMSYEIKKKKKKKKKKQEDPFKDIEEKQLVTIIEKAAFEPDVNIKVENIEVELDFNDFADNTGLMVEGPNSEDSQEPEVKIEQNNHEAVLLTFESVINDNSVLTYGQAVPTEVAPSHVCKVCHLVFQSPKTLRMHQKRKHKSFRRYFTHICNYCGMSYEMKNSLAAHIKRKHGPDASPDDSEEKTCEICALVFKGHSRLRMHMRRKHGAFEDSFTHVCQDCGLTYDKYRSLIVHVQRKHTDNKKPELSQWFNCPFCPKIFTKRETYVRHVQRKHKIDEESLKNEEDKAAQKLLDTYTNEQTGEITCKECPLVFSSINFLKLHMRRKHNALKEDFRLKCRICNLSYDKIESLKRHVRRKHDQGSHCEVCNKQFDTREMYLNHSHVRVIKECSICGLIFASQGGLAKHIRCTHKIDTVKTVFCSICNEGFHDKRQLKPHFMKVHLKVSYNCRYCNKVFKTKETYRRHVIFKHPTNGVVTENMQKCEQCPETFKDEFELCRHINIVHGKDGDLTKPLIEIKKEEVDIKDSFQCTKCTDHYLTWEQLKLHYEQNHQTIEETQCQMCGELIPCTELQKHIKNLHTDTTMQCKYCEFKTTSRVSLTQHMLRHKNAATLHCDYPNCRYKSFYEGAMEKHKRKHADLGVKLQCTQCPFQSMNKYILKYHEEAHETGKKRYRCDQCDYATILPANLVQHKYKHSTEKRFKCEVCPFATKYNTSLRFHVRKKHCDLPTFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01417089; iTF_00761927; iTF_00007370; iTF_01437324; iTF_01252085; iTF_01083584;
90% Identity
iTF_01417089; iTF_00761927; iTF_00007370; iTF_01252085; iTF_01083584;
80% Identity
-