Basic Information

Insect: Tetanocera ferruginea
Gene Symbol: -
Assembly: GCA_958299015.1
Location: OY282641.1:19085994-19091071[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0089 1.5 10.8 0.6 2 23 47 68 46 68 0.96

2 16 0.024 4 9.5 4.4 1 23 74 97 74 97 0.94

3 16 0.19 32 6.6 0.1 3 23 102 126 100 126 0.90

4 16 0.017 2.9 9.9 0.4 1 20 134 153 134 155 0.94

5 16 9.7e-06 0.0016 20.1 1.8 1 23 163 185 163 185 0.98

6 16 0.0075 1.2 11.0 2.6 1 23 191 213 191 213 0.97

7 16 0.00043 0.072 14.9 2.6 1 23 219 241 219 241 0.95

8 16 7.5 1.2e+03 1.6 2.7 2 23 676 698 675 698 0.93

9 16 0.43 72 5.5 0.3 1 23 723 745 723 745 0.93

10 16 0.091 15 7.6 1.8 1 23 753 777 753 777 0.96

11 16 0.2 33 6.6 3.0 3 23 783 803 781 804 0.94

12 16 7.9e-05 0.013 17.3 0.3 2 21 820 839 819 840 0.94

13 16 0.0015 0.24 13.3 0.1 1 23 848 870 848 870 0.97

14 16 1.5e-06 0.00025 22.7 2.8 1 23 876 899 876 899 0.98

15 16 8.3e-05 0.014 17.2 1.4 1 23 905 927 905 927 0.98

16 16 0.00023 0.038 15.8 2.2 1 23 933 955 933 955 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0089	1.5	10.8	0.6	2	23	47	68	46	68	0.96
2	16	0.024	4	9.5	4.4	1	23	74	97	74	97	0.94
3	16	0.19	32	6.6	0.1	3	23	102	126	100	126	0.90
4	16	0.017	2.9	9.9	0.4	1	20	134	153	134	155	0.94
5	16	9.7e-06	0.0016	20.1	1.8	1	23	163	185	163	185	0.98
6	16	0.0075	1.2	11.0	2.6	1	23	191	213	191	213	0.97
7	16	0.00043	0.072	14.9	2.6	1	23	219	241	219	241	0.95
8	16	7.5	1.2e+03	1.6	2.7	2	23	676	698	675	698	0.93
9	16	0.43	72	5.5	0.3	1	23	723	745	723	745	0.93
10	16	0.091	15	7.6	1.8	1	23	753	777	753	777	0.96
11	16	0.2	33	6.6	3.0	3	23	783	803	781	804	0.94
12	16	7.9e-05	0.013	17.3	0.3	2	21	820	839	819	840	0.94
13	16	0.0015	0.24	13.3	0.1	1	23	848	870	848	870	0.97
14	16	1.5e-06	0.00025	22.7	2.8	1	23	876	899	876	899	0.98
15	16	8.3e-05	0.014	17.2	1.4	1	23	905	927	905	927	0.98
16	16	0.00023	0.038	15.8	2.2	1	23	933	955	933	955	0.95

Sequence Information

Coding Sequence: ATGGCAGCTGAAGCTGCTTCTACCgctattgctgttgctgctacaAAACCCGATTCAACAACAGAATCCTCAAATGCAGCACAAGCAGCAGTACAAGCGATGATGGTGCAAATCACCACAGATGGTGTGCCCAAACTGCATTGTCCTGTCTGCAATAAGGCGCTCGTTTCACTTAACGGCTATGTAAAGCATCTGAAAAAACACGAACCGCCCGGTGGCTTTCATTGTCGCTACTGTGAAGGTCGTTTCTGCTCTGAAGATGAACTGAAAAAGCATCGTAATGCAGAGCACACAACAATTGCATGTCGCATCTGCAAAGATGAGTCGCTAACATTCACCAATGAAAATGATTATCGCGAACACATACGTGTCGTACACAACGGCATCGATCGTGTGTTGTTCACATGTGAAAAATGCGGTGCCGAGTACAAGACTTTGGAACCATTTAAGCGGCACAAGGAGAACATGTGCGGCACCATTAAGCCATTCAAATGTGATGAGTGTGAAATGGCATTCTACACCAAGTACAATCTGAAACAGCACAAAATCACACATTCCGGTGAGCGTCGCTACTGTTGCAGCTATTGTGGCAAGAACTTTCTGCAAAAAGGACGGCTGGTAGAGCATGAGCGTTCACACACCGGCGAAAAGCCATACAAATGCGATGTCTGCGGCAAATGCTTTGCGCATCGCGAAAGCATCGTTACACATTCCTCCATACATACGGGCATCAAACTGGTCGAGTGCCGCTGCTGTCTCTCACGTTTCAGCTGCTATTCCAATCTGATCAAACATCGACGCTCAAGACCCGAAACATGCGGTCTACCCGAATACAATCCGCCTAAGAACCGCGTGCGCACGCGCAGACCTAGAATTCCACCCACCATGAATCCCACTTCGGAAATCAAGGTCAGCaacatgaataaaataataaaacccgCGGATAAAATCCATGAAAAAAAGACAAGGCGCATCAAGAAAGAAATCGAAGAAAATGCAGCAGAGCCAAAACCTAAATTAAAACGTGCAACGCGCGCCAAACGTAAGCCGAAACTAAAAGTAGAGTCAGAGGCGGCGTCAACAAGTGACGATGCCGATGACGACAACTACGGCCAAGCGGATGCATTACTCAAAGTAATGCCAAAACGTGCTACACGTGCTAATCGAGCCTTAAAGCTTAATACAACTTCAACAGCAGAAAATATAGCTACCGTGGAagagaaaattactataaaCTCCACCAACACCTCGCCACCTGCAGAGTTGCCCGAACTTAAAGTCGAACAAAAATTACTTTGGAATGAGGATTCCGAATCGGGTGAAGAATATCGAGACTTTGAGCCCGATGACAACGATACTGAAAGTGATGCGGAGGAGCACAAAGCGGAATTGAAGGTGCCTCaaccaaaaataaacataaaacagGAGCAATTTGAAGATGCAACAACCACGTCATCAAATGATTTCGAATACACAGATGCAAATGCCTATGTCAACTCTGAACTAAATGTTAAGTCCGAAGATGAGCAAAATATATTCAATGAAAAAGACAAACTGCTCGATTGTCTGCTTAACGATGACGAGCTGGAATTTACAGAAACGACTCCTTTAAAATCGCGGAAGTTGCCCACatttgatatagtcaaagtgGAGAGTTTGCTGGAAGATAGCGAAGTTGCATATATTAAAGATGAAGAACAGGTAGAGGACATGCTAAATTGCAACAATCTCTCCTCCGGTGAAGTAACGTCGGACTGCAAAATTGTGCTAGAAGATGTTACTGAACGTTATCCAAGACTTAAGCAAGACACTACAGTTAAAATAAAGCGCGTTTCAAAACCTCCCATTGAACGACTTGCAATTCGTCGTCGTAGAGAAATAGAATTACACAAACCAAGACGCAAGTATCGTAAACGTAACGAGCCGAAAGAAGTAGATTTGGCACGTGCACCGAAACGTATGGCAAAACTTTCACAATCTGAGGTCAAGGAACGTTTAAAACTTATCAATAAAGAAAAGTCGTGGCAGTGTCCACATTGCATTAAATTCTATCACATACGTAAACCATTCGAAAAACATTTACGCGACGAGCACAAACTCTCGGAGAAAGAGTTGAAGGACATTTTTAAGGAAGAAGCCGAAATCGGCATACTAGATGATGAGATATTTAGATGCCAGATTTGCTCGAAAATCTATTTGGTGGAGAAACGCCTGCTGGCTCACATACAATTGCATGGTCCCAACGGCACACTTGTGCACAAGTGTCCCTGCTACTGCTCCATATATTTTGCCACCAAAGAAGAGGCACAAGATCATGCGCGTCAGGCACACAAAGAGCTGCTCTTCTGCGAGatatgtgataaatatatgaCTGGCCATGATAGTCTTAAGAATCATCGTTCCATACATCATAGCAATGACAGAAATGCTGTGCAACGCAATGCAGAACGCAATCTAGTCTGTGATAAATGCGGCAAAAAGTATTCGAGCCGCACGTCACTCACCGATCATGTGCGTTCCGATTGCGGACGAATACCGCTCTATCCATGCACCATTTGTGGCAAGCGGTTAACAACGGCTGGCATACTGAAAACACATCTGTTGCTGCATAAGGAAGACACACCCTATCAGTGTGACAAATGCGGCAAGACATTCAAAGTTAAAGCTCAGTACAAATCGCATCTAAAGACGCGACACACCGACTACAAGCCGTTCAAGTGTCATCTCTGTCCCAAGGAGTATCCGTATCGCGAAAGTCTACTCACACACATGACTGTGCATACGGGCATCAAACGTTTTCTCTGCAATGGTTGCGGCAAACGTTTCACCTGCATCTCAAATCTGCAGGCGCATCGCAAAGTGCATGCTGAAACTTGCGGTGCGCTGCCGCTCAACGCCAAGGCCACCCAATACATGGGCGTACAAAAAGGTAACCTACTGCTGGGTGCTAAACCAGAAGCGGGACTGGattataaagaaacaaatacaTTGATAGCGCGTGATGTTATTGATCGTGATCAGCCGATGGCTCAGGAGTTAAATTATCCCTCGGAACCATGTGCACCGTTAGGCACACAACCACTTAACTATGCACAAACGGCGCCTCCACACTTGTTGCTGCCACATCTAATGATGCCAACTTTCATTGATGATTCGCACTCTTCGTATTGA
Protein Sequence: MAAEAASTAIAVAATKPDSTTESSNAAQAAVQAMMVQITTDGVPKLHCPVCNKALVSLNGYVKHLKKHEPPGGFHCRYCEGRFCSEDELKKHRNAEHTTIACRICKDESLTFTNENDYREHIRVVHNGIDRVLFTCEKCGAEYKTLEPFKRHKENMCGTIKPFKCDECEMAFYTKYNLKQHKITHSGERRYCCSYCGKNFLQKGRLVEHERSHTGEKPYKCDVCGKCFAHRESIVTHSSIHTGIKLVECRCCLSRFSCYSNLIKHRRSRPETCGLPEYNPPKNRVRTRRPRIPPTMNPTSEIKVSNMNKIIKPADKIHEKKTRRIKKEIEENAAEPKPKLKRATRAKRKPKLKVESEAASTSDDADDDNYGQADALLKVMPKRATRANRALKLNTTSTAENIATVEEKITINSTNTSPPAELPELKVEQKLLWNEDSESGEEYRDFEPDDNDTESDAEEHKAELKVPQPKINIKQEQFEDATTTSSNDFEYTDANAYVNSELNVKSEDEQNIFNEKDKLLDCLLNDDELEFTETTPLKSRKLPTFDIVKVESLLEDSEVAYIKDEEQVEDMLNCNNLSSGEVTSDCKIVLEDVTERYPRLKQDTTVKIKRVSKPPIERLAIRRRREIELHKPRRKYRKRNEPKEVDLARAPKRMAKLSQSEVKERLKLINKEKSWQCPHCIKFYHIRKPFEKHLRDEHKLSEKELKDIFKEEAEIGILDDEIFRCQICSKIYLVEKRLLAHIQLHGPNGTLVHKCPCYCSIYFATKEEAQDHARQAHKELLFCEICDKYMTGHDSLKNHRSIHHSNDRNAVQRNAERNLVCDKCGKKYSSRTSLTDHVRSDCGRIPLYPCTICGKRLTTAGILKTHLLLHKEDTPYQCDKCGKTFKVKAQYKSHLKTRHTDYKPFKCHLCPKEYPYRESLLTHMTVHTGIKRFLCNGCGKRFTCISNLQAHRKVHAETCGALPLNAKATQYMGVQKGNLLLGAKPEAGLDYKETNTLIARDVIDRDQPMAQELNYPSEPCAPLGTQPLNYAQTAPPHLLLPHLMMPTFIDDSHSSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01181360; iTF_01181361;
90% Identity: -
80% Identity: -