Tmes029039.1
Basic Information
- Insect
- Tenthredo mesomela
- Gene Symbol
- lilli
- Assembly
- GCA_943736035.1
- Location
- CALSEY010000483.1:494151-511396[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-05 1.1 9.8 0.0 44 116 31 105 28 134 0.66 2 2 1.6e-06 0.078 13.6 0.1 323 381 184 243 180 255 0.80
Sequence Information
- Coding Sequence
- ATGATTCACACGCCGATGATGGGTTACCGGGTTACCGCTTCTTCCCCACCTACCCATGACACCTGGTGCAACGTTAATCCGGATTCTCAAGATCGTACAACACAACAGATACAATCAAAGTTGGGTGATTATTCCCTGGTAAAACATCTACTGGATGAACCAAAAAGGCTGATCGGAATCGAAGGTGTACCTCCAAGTCCGGGTGCCTTAGCTCAACGTAAGCCAGTTACTCAAGAATTCAAAAAGCCTGGTGGACTTCGTCCGAATTCAAGCAATACACACGGCTCGCAAAATAGTGGCTACGTTAAACCAGCCGATGGCAAACCGCCCTATATGGGAAGAGGTGGTTATCCTGGTCAACCGGTTAAGCATGGTGGTGGCAGTAATGATCATCGAAGTCACGGTCTTCTGCCAGCTAAAGGTCCTCCTAATCCTGCAGCTAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGTAGTAGTGGAAGTGGAAGTAACGGAGGAAATAACGCCGGTGTAGGAGGAGTAGGAGCAGGAGGAAGATTGCAAAACGCAGGAAGTCATCTCTCAAGATTACCTATGGACAACGGTGCAATGTCCCGGCATTCCGCGACCGAGAATGCTGCAGAGTTGGACAACATTCTAAAGGAGATGGCGCTTCCCATAACACCACTGACAGCTATAGCCCAAACCCCACGCAAAGAACCAGAGTCAAAATTTACCTTCAACCCATACCTCGCCAAGCTGACTGAAGTCCCTCAACCAGAGCCCGCCAAAACTCGTGAGTACATTAACTTTTATCTTTAA
- Protein Sequence
- MIHTPMMGYRVTASSPPTHDTWCNVNPDSQDRTTQQIQSKLGDYSLVKHLLDEPKRLIGIEGVPPSPGALAQRKPVTQEFKKPGGLRPNSSNTHGSQNSGYVKPADGKPPYMGRGGYPGQPVKHGGGSNDHRSHGLLPAKGPPNPAARGGGGGGGGGGSSSGSGSNGGNNAGVGGVGAGGRLQNAGSHLSRLPMDNGAMSRHSATENAAELDNILKEMALPITPLTAIAQTPRKEPESKFTFNPYLAKLTEVPQPEPAKTREYINFYL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01303347;
- 90% Identity
- iTF_01412315;
- 80% Identity
- -