Tmes046021.1
Basic Information
- Insect
- Tenthredo mesomela
- Gene Symbol
- -
- Assembly
- GCA_943736035.1
- Location
- CALSEY010001731.1:286116-287723[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-08 1.9e-05 25.6 0.0 1 39 18 57 18 61 0.86 2 2 5.4 2.6e+03 -0.4 0.2 13 23 139 150 135 152 0.76
Sequence Information
- Coding Sequence
- ATGCCTCGTAAATACGCCCGTAAGAGCAACATTCCGGAGCGAGCCTGCTGGACAGAAAATCAATTAGCAGAAGCTGTGACCCTGCTCAAAGATGGATTGATATCTCAAAGAGAGGCTTCGAGACGTTATAATGTCCCAGTGCGAACATTGGTTCGTCGAATGAAAAGTGGGAATCTAATTAAAGGAACTCTTGAACCCCAAGGTTGCTTGGGTGCGGAGAATGAAAAAAGATTAGTGGCTCACATCTTACAGTTGGCAGAGGCTGGCTTCGCTCCGACGAGAGATACGGTACGCACCCTGGCCTATGAATTTGCTGCGAAGCTGAATTTGAACCATAAGTTTTCAGCTGACAATTGTAAAGCTGGAAGAGCGTGGCTGAGATCGTTTTTGGAAAGACACCCTGCACTATCAATACGTCAGTCGGAGGGATTATCAGTTGCCAGAGCTCAAGGCATGTGTAGACAAGAAGTTGATCAATATTTCAAACTTTTGGAGGAGATACTGCAGAAAAATAATATTTTCGAAAAACCGAAACACATATTCAACATGGACGAGTCTGGTATACAGCTCATAAATAAACCAGGGAAAGTTATAACAAAGAAAGGTGCCAAGGACGTCCACGTTTTAACTACTCGCGAAAGAGGTGAGAATATCTCCTTAATAGCTTGTTGTAACGCAGAAGGGACATTTCTTCCCCCGGTACTCATATTGAAAGGAGTCAACAAGAAACCAGAATTTGCCGATGGACTTCCCCATGGCTCAGACGTTTACATGAATAAGAAATCATCCTTCATCAACTCAGATCTATTCCTTCGGTGGTTGAAAGAACATTTTATCCCACGTAAACCTCCTGGAAAGGTACTCTTGATCTTAGACGGGCACACTTCACATAACAATGCTATTGATATGCTCGAACTTGCAGAACAAAATGATATCATCCTACTATGCTTGCCAAGTCACACTACACAGGCGCTTCAGCCCTTGGATAAAAGTTTCTTCGGTCCTTTGAAAACCTACTTCAATCAGGCAGCACATCGATGGATTCGCAGTCACAGCAACAGAAATCTAACCAGATATCAAGCTGGTCATCTCATCGGGGAGGCTTGGTCAAAAGCAGCATCGGTTGGGAACGGTGTGGCTGGATTCATGAGCACTGGAATATTTCCTTTCAATCCCAGCATAATTCCGGATCATTTTTTTTCAATATCTGATTCAGCTGTACGTTCGGATGGTGCGGTGACCGCTTCCGCTGAAGGACAAGTAGCCGTGACAACATCTCAAAAAGCAAAGACTGCGGCAGTTCTTAATGATAAGTCAGCGGTAGATCCAAAAGTGAAGACCCTACCAACATTTCCCCCCGTTAAGAAGTTACCGAATCCTACGACATCTATCTCATCGCTGACCATAGGCAATGAGCCGTCTCCACCTAGTCCTTCCAAGCATCTGCATGAATCTTGTCCTATTCCACACCTCACGGAATCTAACACCAAGAGAAAACAGTCTGCTGCAGTTCTAACCACTCTGGAAAACATAGTTCTCAAAAAAAGGAAGCTCCAGAGTAAAATTGATTCGGAAACTCTCACAGCGAAGAAGAAGAATAACCCATAA
- Protein Sequence
- MPRKYARKSNIPERACWTENQLAEAVTLLKDGLISQREASRRYNVPVRTLVRRMKSGNLIKGTLEPQGCLGAENEKRLVAHILQLAEAGFAPTRDTVRTLAYEFAAKLNLNHKFSADNCKAGRAWLRSFLERHPALSIRQSEGLSVARAQGMCRQEVDQYFKLLEEILQKNNIFEKPKHIFNMDESGIQLINKPGKVITKKGAKDVHVLTTRERGENISLIACCNAEGTFLPPVLILKGVNKKPEFADGLPHGSDVYMNKKSSFINSDLFLRWLKEHFIPRKPPGKVLLILDGHTSHNNAIDMLELAEQNDIILLCLPSHTTQALQPLDKSFFGPLKTYFNQAAHRWIRSHSNRNLTRYQAGHLIGEAWSKAASVGNGVAGFMSTGIFPFNPSIIPDHFFSISDSAVRSDGAVTASAEGQVAVTTSQKAKTAAVLNDKSAVDPKVKTLPTFPPVKKLPNPTTSISSLTIGNEPSPPSPSKHLHESCPIPHLTESNTKRKQSAAVLTTLENIVLKKRKLQSKIDSETLTAKKKNNP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01413074; iTF_01413076; iTF_01413078;
- 90% Identity
- iTF_01413072;
- 80% Identity
- iTF_01413074;