Tmes037654.1
Basic Information
- Insect
- Tenthredo mesomela
- Gene Symbol
- -
- Assembly
- GCA_943736035.1
- Location
- CALSEY010000850.1:288398-290779[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-08 2e-05 25.6 0.0 1 39 18 57 18 61 0.86 2 2 5.6 2.7e+03 -0.5 0.2 13 23 139 150 135 152 0.76
Sequence Information
- Coding Sequence
- ATGCCTCGTAAATACGCCCGTAAGAGCAACATTCCGGAGCGAGCCTGCTGGACAGAAAATCAATTAGCAGAAGCTGTGACCCTGCTCAAAGATGGATTGATATCTCAAAGAGAGGCTTCGAGACGTTATAATGTCCCAGTGCGAACATTGGTTCGTCGAATGAAAAGTGGGAATCTAATTAAAGGAACTCTTGAACCCCAAGGTTGCTTGGGTGCGGAGAATGAAAAAAGATTAGTGGCTCACATCTTACAGTTGGCAGAGGCTGGCTTCGCTCCGACGAGAGATACGGTACGCACCCTGGCCTATGAATTTGCTGCGAAGCTGAATTTGAACCATAAGTTTTCAGCTGACAATTGTAAAGCTGGAAGAGCGTGGCTGAGATCGTTTTTGGAAAGACACCCTGCACTATCAATACGTCAGTCGGAGGGATTATCAGTTGCCAGAGCTCAAGGCATGTGTAGACAAGAAGTTGATCAATATTTCAAACTTTTGGAGGAGATACTGCAGAAAAATAATATTTTCGAAAAACCGAAACACATATTCAACATGGACGAGTCTGGTATACAGCTCATAAATAAAccagggaaagttataacaaagaaaggtgccaaggacgtccacgttttaactactcgcgaaagagAACAAAATGATATCATCCTACTATGCCTGCCAAGTCACACTACACAGGCGCTTCAGCCCTTGGATAAAAGTTTCTTCGGTCCTTTGAAAACCTACTTCAATCAGGCAGCACATCGATGGATTCGCAGTCACAGCAACAGAAATCTAACCAGATATCAAGCTGGTCATCTCATCGGGGAGGCTTGGTCAAAAGCAGCATCGGTTGGGAACGGTGTGGCTGGATTCATGAGCACTGGAATATTTCCTTTCAATCCCAGCATGATTCCGGATCATTTTTTTTCAATATCTGATTCAGCTGTACGTTCGGATGGTGCGGTGACCGCTTCCGCTGAAGGACAAGTAACCGTGACAACATCTCAAAAAGCAAAGACTGCGGCAGTTCTTAATGATAAGTCAGCGGTAGATCCAAAAGTGAAGACCCTACCAACATTTCCCCCCGTTAAGAAGTTACCGAATCCTACGACATCTATCTCATCGCTGACCATAGGCAATGAGCCGTCTCCACCTAGTCCTTCCAAGCATCTGCATGAATCTTGTCCTATTCCACACCTCACGGAATCTAACACCAAGAGAAAACAGTCTGCTGCAGTTCTAACCACTCTGGAAAACATAGTTCTCAAAAAAAGGAAGCTCCAGAGTAAAATTGATTCGGAAACTCTCACAGCGAAGAAGAAGAATAACCCAAAACGAGAAAAAGCTCAAACCAAAGATAGCAAGAATTCTACTGGGTCTGAGAACCATATTCCTAAAAAGAGAAAATGTACGACTAAGAACTTGAAAAAAATCAAAACAGAAAAAGGTGAATGCAGTAAATTGAAAAAAGAAACAGTGTCACCAGATTCAAGAGAAGATTCCTGTGCCGAATGCTGGGAAAATTATTATGAAACAACAAAAATCGACGACTGGATCAGGTGCAAAGAGTGCAATAATTGGCTGCACGAGAATTGCACGCTATACAAACAGTTGTGCAACAATTGTGGGAGACGAGATGCCCGAAAAAGGCATTTGAAACCGTGA
- Protein Sequence
- MPRKYARKSNIPERACWTENQLAEAVTLLKDGLISQREASRRYNVPVRTLVRRMKSGNLIKGTLEPQGCLGAENEKRLVAHILQLAEAGFAPTRDTVRTLAYEFAAKLNLNHKFSADNCKAGRAWLRSFLERHPALSIRQSEGLSVARAQGMCRQEVDQYFKLLEEILQKNNIFEKPKHIFNMDESGIQLINKPGKVITKKGAKDVHVLTTREREQNDIILLCLPSHTTQALQPLDKSFFGPLKTYFNQAAHRWIRSHSNRNLTRYQAGHLIGEAWSKAASVGNGVAGFMSTGIFPFNPSMIPDHFFSISDSAVRSDGAVTASAEGQVTVTTSQKAKTAAVLNDKSAVDPKVKTLPTFPPVKKLPNPTTSISSLTIGNEPSPPSPSKHLHESCPIPHLTESNTKRKQSAAVLTTLENIVLKKRKLQSKIDSETLTAKKKNNPKREKAQTKDSKNSTGSENHIPKKRKCTTKNLKKIKTEKGECSKLKKETVSPDSREDSCAECWENYYETTKIDDWIRCKECNNWLHENCTLYKQLCNNCGRRDARKRHLKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01413075;
- 90% Identity
- -
- 80% Identity
- -