Tmes031622.1
Basic Information
- Insect
- Tenthredo mesomela
- Gene Symbol
- -
- Assembly
- GCA_943736035.1
- Location
- CALSEY010000557.1:238966-240903[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-08 2.2e-05 25.4 0.0 1 39 18 57 18 61 0.86 2 2 7 3.4e+03 -0.8 0.1 13 23 139 150 135 151 0.75
Sequence Information
- Coding Sequence
- ATGCCTCGTAAATACGCCCGTAAGAGCAACATTCCGGAGCGAGCCTGCTGGACAGAAAATCAATTAGCAGAAGCTGTGACCCTGCTCAAAGATGGATTGATATCTCAAAGAGAGGCTTCGAGACGTTATAATGTCCCAGTGCGAACATTGGTTCGTCGAATGAAAAGTGGGAATCTAATTAAAGGAACTCTTGGACCCCAAGGTTGCTTGGGTGCGGAGAATGAAAAAAGATTAGTGGCTCACATCTTACAGTTGGCAGAGGCTGGCTTCGCTCCGACGAGAGATACGGTACGCACCCTGGCCTATGAATTTGCTGCGAAGCTGAATTTGAACCATAAGTTTTCAGCTGACAATTGTAAAGCTGGAAGAGCGTGGCTGAGATCGTTTTTGGAAAGACACCCTGCACTATCAATACGTCAGTCGGAGGGATTATCAGTTGCCAGAGCTCAAGGCATGTGTAGACAAGAAGTTGATCAATATTTCAAACTTTTGGAGGAGATACTGCAGAAAAATAATATTTTCGAAAAACCGAAACACATATTCAACATGGACGAGTCTGAAGGGACATTTCTTCCCCCGGTACTCATATTGAAAGGAGTCAACAAGAAACCAGAATTTGCCGATGGACTTCCCCATGGCTCAGACGTTTACATGAATAAGAAATCATCCTTCATCAACTCAGATCTATTCCTTCGGTGGTTGAAAGAACATTTTATCCCACGTAAACCTCCTGGAAAGGTACTCTTGATCTTAGACGGGCACACTTCACATAACAATGCTATTGATATGCTCGAACTTGCAGAACAAAATGATATCATCCTACTATGCCTGCCAAGTCACACTACACAGGCGCTTCAGCCCTTGGATAAAAGTTTCTTCGGTCCTTTGAAAACCTACTTCAATCAGGCAGCACATCGATGGATTCGCAGTCACAGCAACAGAAATCTAACCAGATATCAAGCTGGTCATCTCATCGGGGAGGCTTGGTCAAAAGCAGCATCGGTTGGGAACGGTGTGGCTGGATTCATGAGCACTGGAATATTTCCTTTCAATCCCAGCATAATTCCGGATCATTTTTTTTCAATATCTGATTCAGCTGTACGTTCGGATGGTGCGGTGACCGCTTCCGCTGAAGGACAAGTAGCCGTGACAACATCTCAAAAAGCAAAGACTGCGGCAGTTCTTAATGATAAGTCAGCGGTAGATCCAAAAGTGAAGACCCTACCAACATTTCCCCCCGTTAAGAAGTTACCGAATCCTACGACATCTATCTCATCGCTGACCATAGGCAATGAGCCGTCTCCACCTAGTCCTTCCAAGCATCTGCATGAATCTTGTCCTATTCCACACCTCACGGAATCTAACACCAAGAGAAAACAGTCTGCTGCAGTTCTAACCACTCTGGAAAACATAGTTCTCAAAAAAAGGAAGCTCCAGAGTAAAATTGATTCGGAAACTCTCACAGCGAAGAAGAAGAATAACCCAAAACGAGAAAAAGCTCAAACCAAAGATAGCAAGAATTCTACTGGGTCTGAGAACCATATTCCTAAAAAGAGAAAATGTACGACTAAGAACTTGAAAAAAATCAAAACAGAAAAAGGTGAATGCAGTAAATTGAAAAAAGAAACAGTGTCACCAGATTCAAGAGAAGATTCCTGTGCCGAATGCTGGGAAAATTATTATGAAACAACAAAAATCGACGACTGGATCAGGTGCAAAGAGTGCAATAATTGGCTGCACGAGAATTGCACGCTATACAAACAGTTGTGCAACAATTGTGGGAGACGAGATGCCCGAAAAAGGCATTTGAAACCGTGA
- Protein Sequence
- MPRKYARKSNIPERACWTENQLAEAVTLLKDGLISQREASRRYNVPVRTLVRRMKSGNLIKGTLGPQGCLGAENEKRLVAHILQLAEAGFAPTRDTVRTLAYEFAAKLNLNHKFSADNCKAGRAWLRSFLERHPALSIRQSEGLSVARAQGMCRQEVDQYFKLLEEILQKNNIFEKPKHIFNMDESEGTFLPPVLILKGVNKKPEFADGLPHGSDVYMNKKSSFINSDLFLRWLKEHFIPRKPPGKVLLILDGHTSHNNAIDMLELAEQNDIILLCLPSHTTQALQPLDKSFFGPLKTYFNQAAHRWIRSHSNRNLTRYQAGHLIGEAWSKAASVGNGVAGFMSTGIFPFNPSIIPDHFFSISDSAVRSDGAVTASAEGQVAVTTSQKAKTAAVLNDKSAVDPKVKTLPTFPPVKKLPNPTTSISSLTIGNEPSPPSPSKHLHESCPIPHLTESNTKRKQSAAVLTTLENIVLKKRKLQSKIDSETLTAKKKNNPKREKAQTKDSKNSTGSENHIPKKRKCTTKNLKKIKTEKGECSKLKKETVSPDSREDSCAECWENYYETTKIDDWIRCKECNNWLHENCTLYKQLCNNCGRRDARKRHLKP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01413075;
- 90% Identity
- iTF_01413072;
- 80% Identity
- -