Tdis030482.1
Basic Information
- Insect
- Tenthredo distinguenda
- Gene Symbol
- bab1_2
- Assembly
- GCA_947538915.1
- Location
- OX384533.1:23947893-23950260[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-17 1.6e-14 54.1 0.0 1 43 28 71 28 73 0.95 2 3 3.2 3.8e+03 -1.5 1.4 6 15 153 162 151 165 0.88 3 3 2.2 2.6e+03 -1.0 0.0 3 13 192 202 191 206 0.78
Sequence Information
- Coding Sequence
- ATGTGGCAAAAGTGCTGGAACACCAACCAGAGTTTGGTCCACAATCTACGGTTCCGGGAGCGTGGACCCCTGAAGTCCTGGAGGCCCGAGACCATGGCTGAAGCTATTTTCAGCGTCCTCAAGGAGGGTCTTTCCCTGAGCCAAGCTGCCAGGAAATACGACATCCCATATCCTACGTTCGTTCTTTACGCAAATCGCGTACATAACATGTTGGGTCCCAGCGCGGACGGCGGAGCCGGTGAGTATCTCCGACCTAAGGGTCGTGGACGACCGCAAAGAATCCTCCTCGGCGTATGGCCGGACGAGCACATCAGAGGCGTGATAAGAGCCGTTGTATTCCGCGACGGACAATCCGCTCATATCGTAAAGGAAGAACCGGCCACTATGTACCCAAGTCTTGCAAGTTACGCGGCTTGCAACGGTCCCGAAGGTGCCGTGAGCCCAGGAGCCGCTGCGGCCGCCGCGGTCGCCGCTGTCGCCCAGGGCCTACGACATCAGATGTGCAGCATGGTAGCAGCGGCCCATTCCCAACAGCACGACATGATAGGCACAAACCTTTCAGCGAATTTGTCTACGAATATACAAGCCGCTATCCAAGCCCAACAGAACAACGGAAATTCACCGTTGAATTTAGGACTAGCTAGTCCAGGATCAGGACCGCCAGAAAGTCCGATGGAAAGTCCTCTGGCGAGTCCTTTGGGTCCGTTAATGGACCCAGCCCATATCCCTGGTAGCGTAGAACTTGGAATTGGTGTAAGCGGTATGACCTATAAACCAGCACGTAGTTTCGTGAGTCCTAGACCCGAGAATCTTTTTCAAGAGGATATCGCGGACCTTGTTAAAAGTCCTCACGGTTTAAAGGACAAGGATAAGATACCAGTGAAATTAGAGCCTCTCCAGGCGGATTCAAGGTGTGAATAG
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAGEYLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGQSAHIVKEEPATMYPSLASYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMIGTNLSANLSTNIQAAIQAQQNNGNSPLNLGLASPGSGPPESPMESPLASPLGPLMDPAHIPGSVELGIGVSGMTYKPARSFVSPRPENLFQEDIADLVKSPHGLKDKDKIPVKLEPLQADSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01015716;
- 90% Identity
- iTF_00939445;
- 80% Identity
- iTF_01411403;