Tamo013056.1
Basic Information
- Insect
- Tenthredo amoena
- Gene Symbol
- bab1
- Assembly
- GCA_963966615.1
- Location
- OZ016488.1:1556802-1559226[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.4e-17 1.5e-14 53.9 0.0 1 43 49 92 49 94 0.95 2 3 5.3 3.4e+03 -1.6 1.4 6 15 174 183 172 186 0.88 3 3 3.6 2.3e+03 -1.1 0.0 3 13 213 223 212 227 0.78
Sequence Information
- Coding Sequence
- ATggctttttctccttttcggGGGGGTGTTACAGCAGACAGCTACCAGTACCAGCTTCAATCGATGTGGCAAAAGTGCTGGAACACCAACCAGAGTTTGGTCCACAATCTACGGTTCCGGGAGCGTGGACCCCTGAAGTCCTGGAGGCCCGAGACCATGGCTGAAGCTATTTTCAGCGTCCTCAAGGAGGGTCTTTCCCTGAGCCAAGCTGCCAGGAAATACGACATCCCATATCCAACGTTCGTTCTTTACGCAAATCGCGTACATAACATGTTGGGTCCCAGCGCGGACGGCGGAGCCGGTGAGTATCTCCGACCTAAAGGTCGTGGAAGACCGCAAAGAATCCTCCTCGGCGTATGGCCGGACGAGCACATCCGAGGTGTGATAAGAGCCGTTGTATTTCGCGACGGACAATCCGCTCATATCGTGAAGGAAGAACCGGCCACTATGTACCCAAGTCTTGCGAGTTACGCGGCTTGCAATGGTCCCGAAGGTGCCGTGAGCCCAGGAGCTGCTGCGGCCGCCGCAGTCGCCGCTGTCGCCCAGGGCCTACGACATCAGATGTGCAGCATGGTAGCAGCGGCCCATTCCCAACAGCACGACATGATAGGCACAAACCTTTCAGCAAATTTGTCTACGAATATACAAGCCGCTATTCAAGCCCAACAGAACAACGGAAATTCACCATTGAATTTAGGACTAGCTAGTCCAGGATCAGGACCGCCAGAAAGTCCGATGGAAAGTCCTCTAGCGAGTCCTTTGGGTCCGTTAATGGACCCAGCCCATATCCCTGGTAGCGTAGAACTTGGAATTGGTGTAAGCGGTATGACCTATAAACCAGCACGTAGTTTCGTGAGTCCTAGACCCGAGAATCTTTTTCAAGAAGATATCGCGGACCTTGTTAAAAGTCCACACGGTTTAAAGGACAAGGATAAAATACCAGTGAAATTAGAGCCTCTCCAGGCGGATTCAAGGTGTGAATAG
- Protein Sequence
- MAFSPFRGGVTADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAGEYLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGQSAHIVKEEPATMYPSLASYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMIGTNLSANLSTNIQAAIQAQQNNGNSPLNLGLASPGSGPPESPMESPLASPLGPLMDPAHIPGSVELGIGVSGMTYKPARSFVSPRPENLFQEDIADLVKSPHGLKDKDKIPVKLEPLQADSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01015716;
- 90% Identity
- iTF_00939445;
- 80% Identity
- iTF_01412232;