Basic Information

Gene Symbol
ct
Assembly
GCA_947538915.1
Location
OX384534.1:12742132-12757980[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.4e-27 8.5e-24 84.2 0.0 2 72 405 476 404 481 0.95
2 3 2.4e-32 1.5e-28 99.4 0.0 2 77 814 890 813 892 0.96
3 3 1.3e-30 8.3e-27 93.8 0.0 3 75 1044 1117 1042 1121 0.95

Sequence Information

Coding Sequence
ATGGAGGGGATGAGATGCTCACCCAACCCAACCCCCCTGGCCCCTCAGACCACCCCATCCAGCCATCCAGCGATCAGTCAGCTGGGTGAAGAAGTGACGAGACTACAACAGAGTATTCAACGGCTTCAAGAAACCAGTGCCCAAGCCACGGCCCGCCTAGAAGAGGAGCTTGAATTACGCAGACAACACATAAGCAGACTGGAAGCTAGACTCGAGAGACAAAGAGACTATGATGACTTGAAACGTGAAATTAGCGTTTTGAGATCTGTGGATTTCTCCCAAATCCCAACCGGGGAGCCGGGCAAAAGCCTCGAACATCTTCTCATTGAGAGAACGAAAGCTCTTCAACAAACCGAGAGCTTGAAGCCACCTACAACGCCGGACGCACTTGGTGGCCTTGCTTCCCCCCTGCAGCGAGCCGCGACCTCCTCGCCCCACGGCGGCAACGCGCTACCCTCAGCATCCCAACCACCACCACCGCCACCACCACCACCACCTCTACCAGCCCCGACCCGTTCTACCCCGACCCCATCTTCGGCGACCTCTTCGTCCTCCTTACTGTTCCATCCGCCGCTCCAAAACGTGGAAACGTTCGGCTCATTCCTCGGCGAGGAGATCGTCGCCAACTGGAGGCGGTCCCTGGAGAGGTCTATCATGAGTCAGCAGCATCCCCAAGTCTCGCAAAGCCAGCCTCAGCTGTTGCACGGGCCCTCGTTAAACCATCTTCCGTCACCGACAGATTCGACGAACACTGCACCGGCAAAGTCAAACACGCCCCTGGGTAGCGGTCTGGATGCTTCGGAAAAAGCACCGACGCCAATTCCTGGCCAGGAGATACCAGCCCCACCGACACCATCCTCGACAGCCGGCCTGACGTCACCACCCAGCCTTCAACCACCCCCTGTCGTAATTGAGCAGCAACCACCACCGTCCATGAACGGTATACCGCCAAAGAGTCCGGTGGAGGAGTCCTGCCACAACAACAACAATTCACATCATTTGACCAACAACAATATCGGCGGTGGTCTCAGCGTACTGGACACCTTGAAGAGTCCGTTTCGTTTCGACGACCACAGGGCGCATTTTCGATTCGCTGACGAACTCGGGGCTGCCGGTATGGCCGGACGTCTTGGAGAATCGCTGATTCCAAAAGGTGACCCGATGGAGGCTAGACTGCAGGAAATGCTCCGTTACAATATGGACAAATACGCCTCGCAGAATCTTGACACTCTTCATATAGCGAGGAGAGTCAGAGAGCTTTTGTCGATACACAATATTGGCCAGAGACTCTTCGCCAAGTACGTACTCGGACTTAGCCAAGGGACCGTAAGCGAACTACTTAGCAAGCCAAAGCCATGGGACAAGCTGACTGAGAAGGGGAGAGACAGCTACAGAAAGATGCACGGCTGGGCTTGCGACGACAACGCCGTTATGCTGCTCAAATCTCTGATCCCCAAAAAAGAGTGTGTTGCAGGCAAGGAGCAGGGGATGCCGACATTCGCCCGAGGACCCCAAGACGGTGGTCCTCAGGATATGAGCGACGAACGTTTGGCCCATATGCTGTCAGAGTCTGGACACCTGCAGATGCGTAGCGAGCACGACACCTCGAATGATGCCGACAGCAAAAGTCCGCATCGAGTCGGGTGCCCTAGCCCCTTCAGCAAGGAAAGAATGGATACCCTCAACAGGAGAGTTAAGAAGTACGAAAACGACGACATTCCTCAAGAGAAAGTTGTGAGGATCTACCAAGAGGAATTAGCCAAGCTGATGGGACGCAGAGTCGATGATCTTCGCGGACCCAGAGACTTCCCTCCGAGCGCGATGTTTCCTCCCTTTTTCAGCGGCGCCCAGGGCATGCAAGGGATGGATCGTACGCAGGAGGACATCCGCCTAGCCCTCGATGCGTATCACCGTGAATTACAAAAGTTGAACTCTGGTCCGGGGCAAAATCCTGCCTTGGCTGGACTCCCAGGTCTACCGGGACTTCCGGGTCTTTTGGCTCTACAGCAACAGGCTCTTCAGCAACATCACCTCGCTACTAATGGGGGCGGAGTACAAGACCTCAGCCTCGTCAAAGTAGACCCAAGGAATAAAATGATGAACGGTGTTTCGGAGGAAGAAAAGGAGAAGATGGAAGAGGCGATGAGACATGCGGGAAGTGCTTTTTCCTTGGTACGACCCAAGCAGGAACAGCCCATCGGCCCACAGTCTACCCCGGGTGGTTCGAGCGCCAGTTCACCTCTGGGTAACTCGATTTTACCGCCAGCTATGACGCCGAATGAAGACTTTCCTGGTGCCGCGGCAGCCAGTCCTCTACAAAGAATGGCGTCTATCACTAATAGCTTAATAAGCCAACCGTCCACTCCCACACACCATTCGCCGAATCAAAGACCATTGAAAGCGGTTTTGCCTCCGATAACACAGCAGCAATTCGACATGTACAACAATTTGAATACCGAAGATATCGTCAAAAGGGTGAAGGAGCAGCTCTCCCAGTACTCGATCTCTCAGCGTCTATTCGGAGAGTCTGTCTTGGGCCTGTCCCAAGGCTCGGTATCGGACTTATTGGCCAGACCAAAGCCGTGGCACATGCTGACGCAGAAAGGACGCGAGCCCTTCATCAGAATGAAGATGTTCCTCGAGGATGACAACGCGGTACATAAACTCGTCGCGAGTCAGTACAAGATCGCGCCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCCTGCGGAACCCCGATGAAACCAATGCCACCGACGAAACTAGTTCAAGAGCAACTCCAAAATGCTGCAAAGGCCCAGGCTGCTGCACAAGCCGCGGCTCAAGCGGCGGCACAACACCAACAGGAGAATCAAATGCAGCTTGGACCACCCCAACAGAGTCCGCAGCATCCACAACACCCGCAGCACCCGCAACCACCACCACCGATGATTTTAACACCTCCTGGCCCTCATCATCCTCACGCTCAACTTAGCATGCAAGAACTTCAGAAAAAGCAACAACAGATGAGCCTTCACTCGCCTCATCATCAAATGGCACCCTCTCCGCTGCGTGGACTTCACCCTCACATTTCACCGAGCGTTTACGAGATGGCTGCGCTAACTCAGGACCTTGATACCCAAACGATAACGACAAAAATCAAAGAGGCTTTGTTGGCGAACAATATTGGACAGAAGATATTCGGCGAAGCGGTACTTGGTCTGTCTCAAGGTTCGGTTAGCGAATTATTGAGCAAACCTAAGCCCTGGCATATGCTCAGTATCAAGGGACGCGAACCGTTTATAAGAATGCAGTTGTGGCTCTCGGACGCCCACAACGTAGACCGACTTCAAGCCCTGAAGAACGAACGACGAGAGGCGAATAAAAGACGAAGAAACAGCGGACCTGGTCATGACAATAGTTCCGACACATCGAGCAACGACACTGCCGAGTTTTATCACGCCGCATCTCCAGGCCCTGGTCCTGCATCGGCGAAAAAACAACGTGTCTTATTCTCCGAGGAGCAGAAGGAGGCTCTCCGACTCGCCTTCACCCTTGACCCATACCCGAACGTCGCTACGATAGAGTTTCTAGCCGGTGAACTCGCCCTTTCTTCGCGGACGATAACGAACTGGTTCCACAACCACAGGATGCGGCTTAAGCAACAGTCACCACACGGTCCACAGGAAGCACAGTCACCCAGGGAGCCTGGCCAGCCTTTTGACCCTGTGCAATTCAGACTTCTTCTCAACCAAAGACTACTTGAAATACAGAAGGAAAGGCTGGGACTCGGTAACGTCCCGATTCCTTACCCGCCCTACTTCAACACGAACCTTGTCGCCCTCGTCGGTAGTGCCCTTAAGGAGCAGTGCTCGGGTCTCGACCTTTCCATGGGTGCCTTGAAGAGGGAACCCAACCAGGAGTTCGAGGACGACGACGGCGACGACGCGATGAGTAATCTTGGTAGTGAGGATTCGGACGGTTCCGGTGGTAGCATAAAACGTGAACCAACGGAGACCCCAGCCCCGGCAACGGTTCGATCAAATAGAAGAAAGCCGGCAGCACCACAATGGGTAAACCCGGAATGGCAAGAACCGGCCAGAGCTGGCGACGAGGTGATAATAAACGGAGTATGCGTTATGCAAACGGACGATTACGGGGTTAAAAGAGAAGCGGAGGAAACTGTACGCGTAGAACCTACCCCCGTTCAAGACAGATACGAAGAGGACGCGGCGAGTGATTCTTCATCCGCGTCAGGTACGGGGCAAGGATTACAGGACCGAGATAGTCCCATGCCTAGTCCTAAGTCTGGTCAACATAGTCCGATAACTTCGCCAAGACCACCTTCAGAGCAGATCAGTATGCAACAGCAGTCGGTTCAGGATGAGAATATTAAGGATGTTGTTAAACACGAGCCAGACGAATCCTGGGATTATTAG
Protein Sequence
MEGMRCSPNPTPLAPQTTPSSHPAISQLGEEVTRLQQSIQRLQETSAQATARLEEELELRRQHISRLEARLERQRDYDDLKREISVLRSVDFSQIPTGEPGKSLEHLLIERTKALQQTESLKPPTTPDALGGLASPLQRAATSSPHGGNALPSASQPPPPPPPPPPLPAPTRSTPTPSSATSSSSLLFHPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQHPQVSQSQPQLLHGPSLNHLPSPTDSTNTAPAKSNTPLGSGLDASEKAPTPIPGQEIPAPPTPSSTAGLTSPPSLQPPPVVIEQQPPPSMNGIPPKSPVEESCHNNNNSHHLTNNNIGGGLSVLDTLKSPFRFDDHRAHFRFADELGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKECVAGKEQGMPTFARGPQDGGPQDMSDERLAHMLSESGHLQMRSEHDTSNDADSKSPHRVGCPSPFSKERMDTLNRRVKKYENDDIPQEKVVRIYQEELAKLMGRRVDDLRGPRDFPPSAMFPPFFSGAQGMQGMDRTQEDIRLALDAYHRELQKLNSGPGQNPALAGLPGLPGLPGLLALQQQALQQHHLATNGGGVQDLSLVKVDPRNKMMNGVSEEEKEKMEEAMRHAGSAFSLVRPKQEQPIGPQSTPGGSSASSPLGNSILPPAMTPNEDFPGAAAASPLQRMASITNSLISQPSTPTHHSPNQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQENQMQLGPPQQSPQHPQHPQHPQPPPPMILTPPGPHHPHAQLSMQELQKKQQQMSLHSPHHQMAPSPLRGLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRNSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFTLDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQSPHGPQEAQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPIPYPPYFNTNLVALVGSALKEQCSGLDLSMGALKREPNQEFEDDDGDDAMSNLGSEDSDGSGGSIKREPTETPAPATVRSNRRKPAAPQWVNPEWQEPARAGDEVIINGVCVMQTDDYGVKREAEETVRVEPTPVQDRYEEDAASDSSSASGTGQGLQDRDSPMPSPKSGQHSPITSPRPPSEQISMQQQSVQDENIKDVVKHEPDESWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2