Basic Information

Insect: Rhogogaster chlorosoma
Gene Symbol: ct
Assembly: GCA_944452905.1
Location: CALYCC010000033.1:175959-191776[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 1.1e-27 9.5e-24 84.2 0.0 2 72 406 477 405 482 0.95

2 3 1.9e-32 1.7e-28 99.4 0.0 2 77 815 891 814 893 0.96

3 3 1e-30 9.3e-27 93.8 0.0 3 75 1042 1115 1040 1119 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	1.1e-27	9.5e-24	84.2	2	72	406	477	405	482	0.95
2	3	1.9e-32	1.7e-28	99.4	2	77	815	891	814	893	0.96
3	3	1e-30	9.3e-27	93.8	3	75	1042	1115	1040	1119	0.95

Sequence Information

Coding Sequence: ATGGAGGGGATGAGATGCTCACCCAACCCAACCCCCCTGGCCCCTCCGACCACCCCATCGAGCCATCCAGCGATCAGTCAGCTGGGTGAAGAAGTGACGAGACTACAACAGAGTATTCAACGGCTACAAGAGACCAGTGCCCAAGCTACGGCTCGGCTAGAAGAGGAGCTTGAATTACGCAGACAACACATAAGCAGACTGGAAGCTAGACTCGAGAGACAAAGAGACTATGATGACCTGAAACGCGAAATTAGCGTTTTGAGATCGGTGGATTTCTCCCAAATCCCAACCGGGGAGCCGGGAAAAAGCCTCGAACATCTTCTTATTGAGAGAACGAAAGCTCTCCAACAAACCGAGAGCTTGAAGCCACCCACAACGCCGGACGCACTTGGTGGCCTTGCTTCCCCCCTGCAGCGAGCCGCGACCTCCTCGCCCCACGGCGGCAACGCGCTACCCTCAGCATCCCAACCTCCACCTCCGCCACCACCACCACCACCACCACTACCAGCCCCGACCCGTTCTACCCCGACCCCTTCTTCGGCGACCTCTTCGTCCTCCTTACTGTTCCATCCGCCGCTCCAAAACGTGGAGACGTTCGGCTCATTCCTCGGCGAGGAGATCGTCGCCAACTGGAGGCGGTCCCTGGAGAGGTCTATCATGAGTCAGCAGCATCCCCAAGTCTCGCAAAGCCAGCCTCAGCTGTTGCACGGGCCCTCGTTAAACCATCTTCCGTCACCGACAGATTCGACGAACACTGCACCGGCAAAGTCAAACACGCCCCTGGGTAGCGGTCTGGATGCTTCGGAAAAAGCACCGACGCCAATTCCTGGCCAGGAGATACCAGCCCCACCTACACCATCTTCGACAGCCGGTCTGACGTCGCCACCCAGCCTTCAACCACCCCCTGTCGTAATTGAGCAGCAGCCACCACCGTCCATGAACGGCATACCGCCGAAGAGTCCGGTGGAGGAGTCCTGTCACAACAACAACAACTCTCATCATTTGACCAACAACAATATCGGCGGTGGTCTCAGCGTACTCGACACCCTGAAGAGCCCCTTTCGTTTTGACGACCACAGGGCGCATTTTCGTTTCGCTGACGAACTCGGGGCTGCCGGTATGGCCGGACGCCTAGGAGAGTCGCTGATCCCAAAAGGTGACCCGATGGAGGCTAGACTGCAGGAAATGCTCCGTTACAATATGGACAAGTACGCCTCGCAGAATCTTGACACTCTTCATATAGCGAGGAGAGTCAGGGAGCTTTTGTCGATACACAATATTGGCCAGAGACTCTTCGCCAAGTACGTACTCGGACTTAGCCAAGGGACCGTAAGCGAACTACTTAGCAAGCCAAAGCCATGGGACAAGCTGACTGAGAAGGGGAGAGACAGCTACAGAAAGATGCACGGCTGGGCTTGCGACGACAACGCCGTTATGCTGCTCAAATCTCTGATCCCCAAAAAAGAGTGTGTTGCAGGCAAGGAGCAGGGGATGCCAACATTTGCCCGAGGACCCCAAGACGGTGGTCCTCAGGACATGAGCGACGAACGTTTGGCCCATATGCTGTCCGAGTCCGGACACTTGCAGATGCGTAGCGAGCACGACACCTCGAATGATGCCGACAGCAAAAGTCCGCATCGAGTCGGGTGCCCTAGCCCCTTCAGCAAGGAAAGAATGGATAGTCTCAACAGGAGAGTTAAGAAGTACGAAAACGACGACATTCCTCAAGAGAAAGTTGTGAGGATCTACCAAGAGGAACTCGCCAAGCTGATGGGACGCAGAGTCGATGATCTTCGCGGGCCTAGGGACTTCCCTCCGAGCGCGATGTTTCCCCCTTTTTTCAGCGGCGCCCAGGGTATGCAAGGGATGGATCGTACGCAGGAGGACATCCGCTTAGCCCTCGATGCGTATCACCGTGAATTACAAAAGTTGAACTCTGGTCCCGGGCAAAATCCTGCCTTGGCTGGACTCCCTGGTCTACCAGGACTTCCAGGTCTCCTAGCTCTGCAACAGCAGGCTCTCCAGCAACATCACCTCGCTACTAACGGAGGCGGAGTGCAAGATCTCAGCCTCGTCAAAGTAGACCCAAGAAATAAAATGATGAACGGTGTTTCGGAGGAAGAAAAGGAGAAAATGGAGGAGGCGATGAGACATGCAGGAAGTGCTTTCTCCCTGGTACGACCAAAGCAGGAACAGCCCATCGGCCCACAGTCAACCCCGGGTGGTTCAAGCGCCAGTTCACCCCTAGGTAACTCGATTTTACCGCCAGCTATGACGCCGAATGAAGACTTTCCTGGTGCTGCGGCAGCCAGTCCTCTGCAAAGAATGGCGTCCATCACTAATAGCTTAATAAGCCAACCGTCCACTCCCACACATCATTCGCCGAATCAAAGACCATTGAAAGCGGTTCTGCCTCCGATAACGCAGCAGCAATTCGACATGTACAACAATTTGAATACCGAAGACATCGTCAAAAGGGTGAAGGAGCAGCTCTCCCAGTACTCGATCTCTCAGCGTCTATTCGGAGAGTCTGTCTTGGGCCTGTCCCAAGGCTCGGTATCGGATCTACTGGCCAGGCCAAAGCCATGGCATATGCTGACGCAGAAAGGACGCGAGCCCTTCATCAGAATGAAAATGTTCCTCGAGGATGACAACGCGGTACACAAACTCGTCGCGAGTCAGTACAAGATCGCGCCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCCTGCGGAACCCCAATGAAACCAATGCCACCAACGAAACTAGTTCAAGAGCAACTTCAAAATGCCGCGAAGGCCCAGGCCGCTGCACAAGCCGCGGCTCAAGCGGCGGCACAACACCAACAGGAGGCTCAGATGCAGCTTGGACCACCCCAACAAAGTCCGCAGCATCCGCAACACCCACAACCACCACCGCCGATGATTTTAACTCCTCCCGGCCCTCATCATCCTCACGCTCAACTCAGCATGCAAGAACTTCAGAAGAAGCAACAACAGATGAGCCTTCATTCGCCTCATCATCAAATGGCGCCTTCGCCGCTGCGTGGACTTCATCCTCATATTTCGCCGAGCGTTTATGAGATGGCTGCGCTGACTCAAGACCTCGATACCCAAACGATAACGACAAAAATCAAGGAGGCTTTGTTGGCGAACAATATTGGACAGAAGATATTCGGCGAAGCGGTACTTGGTCTGTCTCAAGGTTCGGTTAGCGAATTGTTGAGCAAACCTAAGCCCTGGCATATGCTCAGTATCAAGGGACGCGAACCGTTCATAAGAATGCAGTTGTGGCTCTCGGACGCCCACAATGTAGACCGACTTCAAGCTCTGAAGAACGAACGACGAGAGGCAAATAAAAGACGGAGAAATAGCGGACCCGGTCATGACAATAGCTCCGACACGTCGAGCAACGACACCGCCGAGTTTTATCACGCCGCATCTCCAGGCCCCGGTCCTGCATCGGCGAAAAAACAACGTGTTTTATTCTCCGAGGAGCAGAAGGAGGCTCTTCGACTCGCCTTCACCCTTGACCCATACCCGAACGTTGCTACGATAGAGTTCTTAGCCGGTGAACTCGCCCTTTCTTCACGGACGATAACGAACTGGTTCCACAACCACAGGATGCGGCTGAAGCAGCAGTCGCCACACGGTCCCCAGGAAGCACAGTCACCCAGGGAACCTGGCCAGCCTTTTGACCCTGTGCAATTCAGACTTCTTCTCAACCAAAGACTACTCGAAATACAGAAGGAAAGGCTGGGACTCGGCAATGTCCCGATTCCTTACCCGCCCTACTTCAACACGAACCTTGTCGCCCTCGTCGGTAGTGCTCTCAAAGAGCAATGCTCGGGTCTTGACCTTTCCATGGGCGCCTTGAAGAGGGAACCCAACCAGGAGTTCGAGGACGACGACGGCGACGACGCGATGAGTAATCTTGGTAGCGAGGATTCGGACGGTTCCGGTGGCAGTATAAAACGTGAACCAACGGAGACTCCGGCACCAGCAACGGTTCGATCAAATAGAAGAAAGCCGGCAGCACCGCAATGGGTGAACCCGGAATGGCAAGAGCCAGCGAGAGCTGGTGACGAGGTGATAATAAATGGAGTGTGCGTTATGCAAACGGACGATTACGGTGTTAAAAGAGAAGCGGAGGAAACTGTACGCGTAGAACCTACCCCCGTTCAGGACAGATACGAAGAGGACGCGGCGAGTGATTCTTCGTCCGCGTCAGGTACGGGTCAAGGATTACAGGACCGAGATAGTCCCATGCCTAGTCCCAAGTCTGGTCAACATAGTCCGATAACTTCGCCAAGACCACCTTCAGAACAGATCAGCATGCAACAGCAGTCGGTTCAGGATGAGAATATTAAGGATGTTGTTAAACACGAGCCAGACGAATCCTGGGATTATTAG
Protein Sequence: MEGMRCSPNPTPLAPPTTPSSHPAISQLGEEVTRLQQSIQRLQETSAQATARLEEELELRRQHISRLEARLERQRDYDDLKREISVLRSVDFSQIPTGEPGKSLEHLLIERTKALQQTESLKPPTTPDALGGLASPLQRAATSSPHGGNALPSASQPPPPPPPPPPPLPAPTRSTPTPSSATSSSSLLFHPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQHPQVSQSQPQLLHGPSLNHLPSPTDSTNTAPAKSNTPLGSGLDASEKAPTPIPGQEIPAPPTPSSTAGLTSPPSLQPPPVVIEQQPPPSMNGIPPKSPVEESCHNNNNSHHLTNNNIGGGLSVLDTLKSPFRFDDHRAHFRFADELGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKECVAGKEQGMPTFARGPQDGGPQDMSDERLAHMLSESGHLQMRSEHDTSNDADSKSPHRVGCPSPFSKERMDSLNRRVKKYENDDIPQEKVVRIYQEELAKLMGRRVDDLRGPRDFPPSAMFPPFFSGAQGMQGMDRTQEDIRLALDAYHRELQKLNSGPGQNPALAGLPGLPGLPGLLALQQQALQQHHLATNGGGVQDLSLVKVDPRNKMMNGVSEEEKEKMEEAMRHAGSAFSLVRPKQEQPIGPQSTPGGSSASSPLGNSILPPAMTPNEDFPGAAAASPLQRMASITNSLISQPSTPTHHSPNQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQEAQMQLGPPQQSPQHPQHPQPPPPMILTPPGPHHPHAQLSMQELQKKQQQMSLHSPHHQMAPSPLRGLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRNSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFTLDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQSPHGPQEAQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPIPYPPYFNTNLVALVGSALKEQCSGLDLSMGALKREPNQEFEDDDGDDAMSNLGSEDSDGSGGSIKREPTETPAPATVRSNRRKPAAPQWVNPEWQEPARAGDEVIINGVCVMQTDDYGVKREAEETVRVEPTPVQDRYEEDAASDSSSASGTGQGLQDRDSPMPSPKSGQHSPITSPRPPSEQISMQQQSVQDENIKDVVKHEPDESWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01394913;
90% Identity: iTF_01412097;
80% Identity: iTF_01303205;