Basic Information

Gene Symbol
ct
Assembly
GCA_963978835.1
Location
OZ022230.1:13492650-13505923[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.6e-27 8.3e-24 84.2 0.0 2 72 386 457 385 462 0.95
2 3 2.8e-32 1.5e-28 99.4 0.0 2 77 795 871 794 873 0.96
3 3 1.5e-30 8.1e-27 93.8 0.0 3 75 1025 1098 1023 1102 0.95

Sequence Information

Coding Sequence
ATGAGACTTGAAcagATCAGTCAGCTGGGTGAAGAAGTGACGAGACTACAACAGAGTATCCAACGGCTTCAAGAGACCAGTGCCCAAGCTACGGCCCGCCTAGAAGAGGAGCTTGAATTGCGCAGACAACACATAAACAGACTGGAAGCTAGACTCGAGAGACAAAGAGACTATGATGACTTGAAACGCGAAATTAGCGTTTTGAGATCGGTGGATTTCTCCCAAATACCAACCGGGGAGCCGGGAAAAAGCCTCGAACATCTTCTCATTGAGAGAACGAAAGCTCTTCAACAAACCGAGAGCTTGAAGCCACCCACAACGCCGGACGCACTTGGTGGCCTTGCTTCCCCCTTGCAGCGAGCCGCGACCTCCTCGCCCCACGGCGGCAACGCGCTACCCTCAGCATCCcaaccaccaccaccgccaccaccaccaccacctttACCAGCCCCGACCCGTTCTACCCCGACCCCTTCTTCGGCGACCTCTTCGTCCTCCTTACTGTTCCATCCGCCGCTCCAAAACGTGGAGACGTTCGGCTCATTCCTCGGCGAGGAGATCGTCGCCAACTGGAGGCGGTCCCTGGAGAGGTCTATCATGAGTCAGCAGCATCCCCAAGTCTCGCAAAGCCAGCCTCAGCTGTTGCACGGGCCCTCGTTAAACCATCTTCCGTCACCGACAGATTCGACGAACACTGCACCGGCAAAGTCAAACACTCCACTGGGTAGCGGTTTGGATGCTTCGGAAAAAGCACCGACGCCAATTCCTGGCCAGGAGATACCAGCCCCACCTACACCATCTTCGACAGCCGGTCTGACGTCACCACCCAGCCTTCAACCACCCCCTGTCGTAATTGAGCAGCAGCCACCACCGTCCATGAACGGCATACCGCCAAAGAGTCCAGTGGAGGAGTCCTgccacaacaacaacaactcACATCATTTGACCAACAACAATATCGGCGGTGGTCTCAGCGTCCTGGACACCCTGAAGAGCCCGTTTCGTTTCGACGACCACAGGGCGCATTTTCGATTCGCTGACGAGCTCGGGGCTGCTGGTATGGCCGGACGCCTTGGAGAATCGCTGATTCCAAAAGGTGACCCGATGGAGGCTAGACTGCAGGAAATGCTCCGTTACAATATGGACAAGTACGCCTCGCAGAATCTTGACACTCTTCACATAGCGAGGAGAGTCAGAGAGCTTTTGTCGATACATAATATTGGGCAGAGACTCTTTGCCAAATACGTACTCGGACTTAGCCAAGGGACCGTAAGCGAACTACTTAGCAAGCCAAAGCCATGGGACAAGCTGACTGAGAAGGGGAGAGACAGCTACAGAAAGATGCACGGCTGGGCTTGCGACGACAACGCCGTTATGCTGCTCAAATCTCTGATCCCCAAAAAAGAGTGTGTTGCAGGTAAGGAGCAGGGGATGCCGACATTTGCCCGAGGACCCCAAGACGGTGGTCCTCAGGATATGAGCGACGAACGTTTGGCCCATATGCTGTCAGAGTCCGGACACCTGCAGATGCGTAGCGAGCACGACACCTCGAATGATGCCGACAGCAAGAGTCCGCATCGAGTCGGGTGCCCTAGCCCCTTCAGCAAGGAAAGAATGGATAGTCTCAACAGGAGAGTTAAGAAGTACGAAAACGACGACATTCCTCAAGAGAAAGTTGTGAGGATCTACCAAGAGGAACTTGCCAAGCTGATGGGACGCAGAGTCGATGATCTTCGCGGACCCAGAGACTTCCCTCCGAGCGCGATGTTTCCTCCCTTTTTCAGCGGCGCCCAGGGTATGCAAGGGATGGATCGTACGCAAGAGGACATCCGCCTAGCCCTTGATGCGTATCATCGTGAATTACAAAAGTTGAACTCTGGTCCGGGGCAGAATCCTGCCTTAGCTGGACTCCCCGGTCTACCAGGACTTCCGGGTCTTCTAGCTCTACAGCAGCAGGCTCTTCAGCAACATCACCTCGCTACGAATGGGGGCGGAGTACAAGACCTCAGCCTCGTCAAGGTAGACGCAaggaataaaatgatgaaCGGTGTATCGGAtgaagaaaaggagaagatGGAGGAGGCGATGAGACACGCAGGAAGTGCTTTCTCCTTGGTACGACCCAAGCAGGAACAGCCCATCGGCCCACAGTCTACCCCGGGTGGTTCAAGCGCCAGTTCACCTTTAGGTAACTCGATTTTACCGCCAGCTATGACGCCGAATGAAGACTTTCCCGGTGCCGCGGCAGCCAGTCCTCTACAAAGAATGGCGTCCATCACTAATAGCTTAATAAGCCAACCGTCCACTCCCACACACCATTCGCCGAATCAAAGACCATTGAAAGCGGTTTTGCCTCCGATAACACAGCAGCAATTCGACATGTACAACAATTTGAATACCGAAGATATCGTCAAAAGGGTGAAGGAGCAGCTCTCCCAGTACTCGATCTCTCAGCGTCTATTCGGAGAGTCTGTCTTGGGCCTGTCCCAAGGCTCGGTATCGGACCTATTGGCCAGACCGAAGCCATGGCACATGCTGACGCAAAAAGGACGCGAGCCTTTCATCAGAATGAAGATGTTCCTTGAGGATGACAACGCGGTACATAAACTCGTCGCGAGTCAGTACAAGATCGCACCGGAGAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCCTGCGGAACCCCAATGAAACCAATGCCACCAACGAAACTAGTTCAAGAGCAACTGCAAAATGCTGCAAAGGCCCAGGCTGCTGCACAAGCCGCGGCTCAAGCGGCGGCACAACATCAACAGGATACTCAAATGCAGCTTGGACCACCTCAACAGAGTCCTCAGCATCCACAACACCCACAACACCCACAACCACCACCACCGATGATTCTAACTCCTCCCGGCCCTCATCATCCTCACGCTCAACTTAGCATGCAGGAACTTCAGAAGAAGCAACAACAGATGAGCCTTCATTCGCCTCATCATCAAATGGCTCCTTCTCCGCTGCGTGGACTTCACCCTCACATTTCACCGAGCGTTTATGAGATGGCTGCGCTAACTCAGGACCTTGATACCCAAACGATAACGACAAAAATCAAGGAGGCTTTGTTGGCGAACAATATCGGACAGAAGATATTCGGCGAAGCAGTACTTGGTCTGTCTCAAGGTTCGGTTAGCGAATTATTGAGCAAACCTAAGCCGTGGCATATGCTCAGTATCAAGGGACGCGAACCGTTCATAAGAATGCAGTTGTGGCTCTCGGACGCCCACAATGTAGACCGACTTCAAGCCCTGAAGAACGAACGACGAGAGGCAAATAAAAGACGAAGAAATAGCGGACCCGGTCATGACAATAGCTCCGACACATCGAGCAACGACACTGCCGAGTTTTATCACGCTGCATCTCCAGGCCCTGGTCCTGCATCGGCGAAAAAACAACGTGTTTTATTTTCCGAGGAGCAGAAGGAGGCTCTCCGACTCGCCTTCACCCTTGACCCATACCCGAACGTTGCTACGATAGAGTTCCTAGCCGGTGAACTCGCCCTTTCCTCACGGACGATAACGAACTGGTTCCACAACCACAGGATGCGGCTTAAGCAGCAATCACCACACGGTCCACAGGAAGCACAGTCACCAAGGGAACCTGGCCAGCCTTTTGACCCTGTGCAATTCAGACTTCTTCTCAACCAAAGATTACTTGAAATACAGAAGGAGAGGCTGGGACTCGGAAACGTCCCGATTCCTTACCCACCCTACTTCAACACGAACCTTGTTGCCCTCGTCGGTAGTGCCCTTAAGGAGCAATGCTCGGGTCTTGACCTTTCCATGGGCGCCTTGAAGAGGGAACCCAACCAGGAGTTCGAGGACGACGACGGCGATGACGCGATGAGTAATCTTGGTAGCGAGGATTCGGACGGTTCCGGTGGTAGCATAAAACGTGAACCAACGGAGACTCCAGCCCCAGCAATGGTTCGATCAAATAGAAGAAAGCCGGCAGCACCACAGTGGGTAAACCCGGAATGGCAAGAACCAGCCAGAGCTGGTGACGAGGTGATAATAAACGGAGTATGCGTTATGCAAACGGACGATTACGGGGTTAAAAGAGAAGCGGAGGAAACTGTACGCGTAGAACCTACCCCCGTTCAAGACAGATACGAAGAGGACGCGGCGAGTGATTCTTCATCCGCATCAGGTACGGGGCAAGGATTACAGGACCGAGATAGTCCCATGCCTAGTCCTAAGTCTGGTCAACATAGTCCGATAACTTCGCCAAGACCACCTTCAGAACAGATCAGCATGCAACAACAGTCGGTTCAAGATGAGAATATTAAGGATGTTGTTAAACACGAGCCAGACGAATCCTGGGACTATTAG
Protein Sequence
MRLEQISQLGEEVTRLQQSIQRLQETSAQATARLEEELELRRQHINRLEARLERQRDYDDLKREISVLRSVDFSQIPTGEPGKSLEHLLIERTKALQQTESLKPPTTPDALGGLASPLQRAATSSPHGGNALPSASQPPPPPPPPPPLPAPTRSTPTPSSATSSSSLLFHPPLQNVETFGSFLGEEIVANWRRSLERSIMSQQHPQVSQSQPQLLHGPSLNHLPSPTDSTNTAPAKSNTPLGSGLDASEKAPTPIPGQEIPAPPTPSSTAGLTSPPSLQPPPVVIEQQPPPSMNGIPPKSPVEESCHNNNNSHHLTNNNIGGGLSVLDTLKSPFRFDDHRAHFRFADELGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKECVAGKEQGMPTFARGPQDGGPQDMSDERLAHMLSESGHLQMRSEHDTSNDADSKSPHRVGCPSPFSKERMDSLNRRVKKYENDDIPQEKVVRIYQEELAKLMGRRVDDLRGPRDFPPSAMFPPFFSGAQGMQGMDRTQEDIRLALDAYHRELQKLNSGPGQNPALAGLPGLPGLPGLLALQQQALQQHHLATNGGGVQDLSLVKVDARNKMMNGVSDEEKEKMEEAMRHAGSAFSLVRPKQEQPIGPQSTPGGSSASSPLGNSILPPAMTPNEDFPGAAAASPLQRMASITNSLISQPSTPTHHSPNQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQDTQMQLGPPQQSPQHPQHPQHPQPPPPMILTPPGPHHPHAQLSMQELQKKQQQMSLHSPHHQMAPSPLRGLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRNSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFTLDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQSPHGPQEAQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPIPYPPYFNTNLVALVGSALKEQCSGLDLSMGALKREPNQEFEDDDGDDAMSNLGSEDSDGSGGSIKREPTETPAPAMVRSNRRKPAAPQWVNPEWQEPARAGDEVIINGVCVMQTDDYGVKREAEETVRVEPTPVQDRYEEDAASDSSSASGTGQGLQDRDSPMPSPKSGQHSPITSPRPPSEQISMQQQSVQDENIKDVVKHEPDESWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01394913;
90% Identity
iTF_01412097;
80% Identity
iTF_01414059;