Tmol003881.1
Basic Information
- Insect
- Tenebrio molitor
- Gene Symbol
- -
- Assembly
- GCA_963966145.1
- Location
- OZ014538.1:43359301-43364989[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.5e-11 1.3e-08 35.0 0.0 1 39 276 315 276 319 0.90 2 4 8.7e-13 4.5e-10 39.7 0.1 1 39 330 368 330 371 0.95 3 4 1.1e-18 5.7e-16 58.5 0.0 1 45 385 430 385 430 0.98 4 4 3.1e-16 1.6e-13 50.7 0.0 1 39 437 476 437 480 0.93
Sequence Information
- Coding Sequence
- ATGGAAGAAACTTCACTTCTCCGTACGGCCGACCAGTTGAAGATCAAAGGCCTGTGCGAACCCCCCGACGAAAAGGAGAACTCGCCGATCGAACCGCAGTACTTCGCCAAAGGTTTCTCCAAAGTTAGAAAGTCGTCCTCACCGAAACAGTTCAAACCGCAAGACAATAATAAGCGAAACAAGCAGAAAAAACCGCACTTGGACAATACGTCGGATAAGGAAGACAATGGCAGCGTAGACGGACATTCTTCAGACGAAGAACATGATATGCCAGTGGCTTTAAATGAACACAAGAGAAAAAGGGCGGAGCCTGAACAAATAAAACCACTCAACATGAGCAGTCATGGAATTATGACGGGACAGACGATCTTCTCTCAGTTCGGAGTAGACACAGATGACTTCCCTCCAGAGCCTCCGGCGCCTTCAGCGATCCCCGTCGGCCACGTGGAGATGCAGGACCACTCGCCGACGAGGACCCTCCTCACCAACACCATTCATCGAACGGACATCTCCGACTCCAACGTCAAGTACTGCGACATCAAGAAGGAGGCGGACATCAAGTTCGAGACGTTGCGGTCGTACGATCAGGACTCGCTGCTCGAGATGGACTCGCACATGTCCGGCCCGGACCACTCCATGGACAGCCACGAGGACGAGCAGAGCATGCACCAGATGATGGTGACGCCGGAGCTGATGGGCATGATGCCCGGGGTTTCGAACAGACTAGAATTAAGTAGCAACGAAGTACCTGCATTAAAAAACAACGGCCACTCGGAGAGCATACATCACACGCCGAGATCTCACGGGGGCGGCCCGAAAACATGGACTCAGGAAGACATGGATATGGCCTTAGACGCTTTAAGAAACCACAACATGAGCCTAACAAAAGCTTCAGCAACTTACGGTATTCCCTCCACTACGCTATGGCAAAGAGCGCATAGGTTAGGAATAGATACGCCAAAGAAGGAAGGTCCGACCAAGTCGTGGACCGAAGAGAATCTCAACAGTGCGCTGGAGGCGCTCAGGACCGGAACCATTTCCGCCAACAAAGCCAGTAAAGCTTACGGTATTCCCAGCAGTACCTTGTACAAAATAGCCCGACGAGAAGGTATCAGACTAGCGGCCCCTTTCAACGCGGCCCCGACGACGTGGACGCCGGAAGACCTCGAAAAAGCCTTAGAATCCATCAGATCTGGCCAGACGTCCGTGCAGAAAGCCTCGACGGAATTCGGCATTCCCACGGGGACCCTCTACGGCAGATGCAAGCGGGAGGGGATAGAACTGTCGAGGTCGAACCCGACGCCGTGGTCGGAGGACGCGATGGGAGAGGCTTTGGAAGCCGTCAGATTGGGACACATGTCCATCAACCAAGCTGCCATACACTACAATCTGCCTTATTCCTCGCTGTATGGCAGATTCAAGAGGGGCATCAAATACGAATCGGACAATATCGAACCCAACTCGGACAGCCAGTCCCAGATCGACGGACACACTTTCGGCATGGAATACGCCAATACTCACCAACAAATCCAGTACCAGAATCAAACGAACAGCTGA
- Protein Sequence
- MEETSLLRTADQLKIKGLCEPPDEKENSPIEPQYFAKGFSKVRKSSSPKQFKPQDNNKRNKQKKPHLDNTSDKEDNGSVDGHSSDEEHDMPVALNEHKRKRAEPEQIKPLNMSSHGIMTGQTIFSQFGVDTDDFPPEPPAPSAIPVGHVEMQDHSPTRTLLTNTIHRTDISDSNVKYCDIKKEADIKFETLRSYDQDSLLEMDSHMSGPDHSMDSHEDEQSMHQMMVTPELMGMMPGVSNRLELSSNEVPALKNNGHSESIHHTPRSHGGGPKTWTQEDMDMALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGIKYESDNIEPNSDSQSQIDGHTFGMEYANTHQQIQYQNQTNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00841760;
- 90% Identity
- iTF_00414981;
- 80% Identity
- -