Basic Information

Insect: Temnothorax unifasciatus
Gene Symbol: -
Assembly: GCA_030770225.1
Location: JASTWK010002487.1:182211-186431[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 2.4e-12 2e-09 38.2 0.0 1 39 300 339 300 343 0.90

2 4 1.4e-12 1.3e-09 38.9 0.1 2 39 355 392 354 395 0.94

3 4 2.1e-18 1.8e-15 57.6 0.0 1 45 409 454 409 454 0.97

4 4 3.8e-18 3.3e-15 56.7 0.1 1 42 461 503 461 504 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	2.4e-12	2e-09	38.2	0.0	1	39	300	339	300	343	0.90
2	4	1.4e-12	1.3e-09	38.9	0.1	2	39	355	392	354	395	0.94
3	4	2.1e-18	1.8e-15	57.6	0.0	1	45	409	454	409	454	0.97
4	4	3.8e-18	3.3e-15	56.7	0.1	1	42	461	503	461	504	0.97

Sequence Information

Coding Sequence: ATGCGCGACTCGTTACTTTTGAAGTTACACGTTGGACTTTCTCGACGACTTAGTTTTCCGTTTCTTCCACAGTCGCTCTTGAAGACGGCCGACCAGCTAAAGATCAAGGGCCTGTGCGAGGTGCCGGAGAACAGGGACGGTCCGCCACCCGTGAGCTTGAGCTCGCCGCCGAGGGAGTCCGGCACCCCGAGGTTGAATTACACGAAGCTGAAGAAGCACCATCAGCGGTACAAGAGACCCAGAATCGAGCGGCCCGCGTTCGAGCCGCGCGCCACCGATCCGAGACACTACGATCGCTACAAAGAGGAGGAGGCCAACAACGATTACAGCCGCGATAACAAAGAGAATCATCGGGACTGGCAGGCTGAAGATGAAGAGTGCACGGagacagcaacagcagcagtaGCACTGGAAACTTGCCagcgtaataataataacaataacaacaacaacGGTAACGGCACGAGTAACAACGGTGACATGTTCTGTCACACAGGGCTAGGGCACTACGGCCACCATCCGGATCCCGGAGAGGTCGATTTGCCCCCCGAGACCCAACCCACCCCACCCAGCGCCACCCTGGTCGGCACCACCATCACTCACCTGAGGGACCCGGATCATCATACAGAGATTCAGAACTGCGACAGCGTCAAGATCAAGTTCGAGACGCTGCACACGATGGACTCCTCCGACACGATCGACATAGACAGCCACATGTCGGATCGGGCGAGCGTGAGCTCGAAAAACGCCGCCGACAGCGACAACATGATGATGATAACGCCGGAGTTGCTGGGACTGATGCCGTCGGGAAGCTCCGGCCAGTCGGACTCGGGCGAGAACAATTCGAGGGGGCACAGCGGACAGTCGAGCTCGCATCATCACGGTTCAAAATCGTGGACGCAAGAGGACATGGACGCGGCTTTAGAGGCGCTGAGAAATCACAACATGAGCCTCACGAAAGCTTCGGCAACATTCGGTATTCCCTCGACGACTCTGTGGCAACGGGCACATCGATTGGGCATCGACACGCCGAAGAAAGATGGCCCCACGAAATCCTGGAGCGACGAGAGCTTGAACAACGCTTTAGAGGCGTTGCGCACCGGCTCCATTTCGGCTAACAAGGCGTCCAAGGCGTACGGCATACCTTCCAGTACGTTGTACAAGATCGCCAGGAGAGAAGGCATCAGGCTGGCCGCGCCGTTTAACGCGAGTCCCACTACGTGGACGCCGGCCGATCTGGACCGCGCCCTAGAAGCAATAAGATCTGGTCAGACCTCCGTGCAGAGAGCGTCGACGGAATTCGGTATACCTACGGGGACTCTATACGGAAGATGCAAGCGGGAAGGAATCGAGCTTAGCAGGAGCAATCCCACGCCGTGGAGCGAAGACGCTATGACTGAAGCTCTCGAGGCCGTCAGATTAGGGCACATGAGCATAAATCAAGCGGCGATCCACTACAATCTACCGTATTCGTCACTGTACGGGCGCTTCAAGAGAGGCAAATACGAGGAACCCGTCGTCGGCGACCTCTCGCAGGATGGCACCAGTCCGCACTTCCATCAAAGCCCCAACCAGAATCACTCGTCCGCCCTTCCAGATCAAATGCCTTATCCGGGCAGCTGA
Protein Sequence: MRDSLLLKLHVGLSRRLSFPFLPQSLLKTADQLKIKGLCEVPENRDGPPPVSLSSPPRESGTPRLNYTKLKKHHQRYKRPRIERPAFEPRATDPRHYDRYKEEEANNDYSRDNKENHRDWQAEDEECTETATAAVALETCQRNNNNNNNNNGNGTSNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSGQSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHNMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGSISANKASKAYGIPSSTLYKIARREGIRLAAPFNASPTTWTPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVGDLSQDGTSPHFHQSPNQNHSSALPDQMPYPGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00279879;
90% Identity: iTF_01520386;
80% Identity: iTF_01408080;