Basic Information

Gene Symbol
Bgb
Assembly
GCA_030770225.1
Location
JASTWK010002468.1:1425502-1428119[-]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.3e-48 2e-43 149.2 0.0 1 94 34 124 34 133 0.95

Sequence Information

Coding Sequence
ATGATGCACGCAATGAGCGAGCACGCGGGCGTGGGCGTGCTACCATTCGACGGAATGGGTCTTTACGAACAGCCGCGACCGCCCCGGCTCGTCTTTAAGATGCCGCGCGTGGTCCCCGATCAGAAGACCAAGTTTGAGAGCGACGAGCTGTTCAGAAGGCTGAGTCGCGAGAGCGAGgtgAGATACACTGGTTACAGAGACCGGCCGCTCGAAGAACGTCAAGTACGTTTCCAAAATGGCTGTCGGGAAGGCCACACGGAGATCGCGTTTGCGGCGACGGGCACCAACCTCCAGCTTGTTTTCGGCAACGCATCCGGGAACTATCCCGTCGATCCCAACGACTGCGATTTCGACAAGGAACACGGGAAGGGACCGTTAGGCATAGACGTTGCGCAAGTTTTCGGGACCATAATTTAG
Protein Sequence
MMHAMSEHAGVGVLPFDGMGLYEQPRPPRLVFKMPRVVPDQKTKFESDELFRRLSRESEVRYTGYRDRPLEERQVRFQNGCREGHTEIAFAATGTNLQLVFGNASGNYPVDPNDCDFDKEHGKGPLGIDVAQVFGTII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00385044;
90% Identity
iTF_00127947;
80% Identity
-