Trug032592.1
Basic Information
- Insect
- Temnothorax rugatulus
- Gene Symbol
- Sub1
- Assembly
- GCA_035220575.1
- Location
- JASTWL010000970.1:31355-31902[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.32 1.5e+04 -3.1 1.3 30 37 39 46 32 46 0.74 2 2 5.1e-29 2.5e-24 85.9 0.4 1 51 56 107 56 108 0.97
Sequence Information
- Coding Sequence
- ATGCCGAAGTCAAAAGAATATCTGTCTGACAGCGATGACAGCAGTGAGGAGGAAGTAAAGTCaaaaaagaagcaaaagagGGAAAGggaagaagatgaagaaaaagaggtgaagaaagagaagaaaccGGCGAAGAAGGCAAAAACGGATGACGAAGATACTATTTGGGACTTGGGTAACAATCGTCAAGTAAATGTGAGGAATTTCAAAGGCAAATATTACGTCGATATTCGGGAGATGTATTATGACAAGGATGGCGATTTAAAACCTGGGAAAAAAGGAATATGCTTAACCATGCAACAATGGCGAAAGTTAATGGATGTTGTGGAGGATGTGGATAAAGTGGCCAAGTCAAAGAGTTAG
- Protein Sequence
- MPKSKEYLSDSDDSSEEEVKSKKKQKREREEDEEKEVKKEKKPAKKAKTDDEDTIWDLGNNRQVNVRNFKGKYYVDIREMYYDKDGDLKPGKKGICLTMQQWRKLMDVVEDVDKVAKSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01229030;
- 90% Identity
- iTF_01405706;
- 80% Identity
- -