Basic Information

Insect: Temnothorax nylanderi
Gene Symbol: -
Assembly: GCA_030848795.1
Location: JASTWM010000008.1:1569467-1578479[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.045 7.1 8.6 3.1 1 23 1304 1326 1304 1326 0.97

2 19 0.038 5.9 8.8 0.5 2 23 1362 1383 1361 1383 0.96

3 19 0.001 0.16 13.8 1.1 1 23 1450 1472 1450 1472 0.96

4 19 0.0012 0.18 13.6 0.7 1 23 1475 1497 1475 1497 0.98

5 19 2e-05 0.0031 19.1 1.1 2 23 1544 1566 1543 1566 0.96

6 19 0.016 2.5 10.0 2.3 1 23 1572 1594 1572 1594 0.96

7 19 0.0015 0.23 13.3 0.7 1 20 1600 1619 1600 1624 0.94

8 19 4.4e-05 0.0068 18.1 1.3 1 23 1698 1720 1698 1720 0.97

9 19 0.0011 0.18 13.6 5.2 1 23 1779 1801 1779 1801 0.96

10 19 0.00066 0.1 14.4 0.7 1 20 1806 1825 1806 1827 0.94

11 19 0.11 17 7.4 0.3 2 23 1838 1859 1838 1859 0.97

12 19 6.7e-05 0.011 17.5 0.6 2 23 1898 1919 1897 1919 0.97

13 19 6.1e-05 0.0096 17.6 1.6 1 23 1924 1946 1924 1946 0.95

14 19 0.0026 0.41 12.5 1.7 1 20 1952 1971 1952 1974 0.93

15 19 1.1e-05 0.0017 20.0 0.4 1 23 1990 2012 1990 2012 0.95

16 19 8.8e-07 0.00014 23.4 0.6 1 23 2018 2040 2018 2040 0.99

17 19 9.6e-05 0.015 17.0 0.2 1 23 2046 2068 2046 2068 0.97

18 19 0.057 8.8 8.3 6.9 1 23 2074 2096 2074 2096 0.96

19 19 0.012 1.9 10.4 0.6 1 20 2102 2121 2102 2123 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.045	7.1	8.6	3.1	1	23	1304	1326	1304	1326	0.97
2	19	0.038	5.9	8.8	0.5	2	23	1362	1383	1361	1383	0.96
3	19	0.001	0.16	13.8	1.1	1	23	1450	1472	1450	1472	0.96
4	19	0.0012	0.18	13.6	0.7	1	23	1475	1497	1475	1497	0.98
5	19	2e-05	0.0031	19.1	1.1	2	23	1544	1566	1543	1566	0.96
6	19	0.016	2.5	10.0	2.3	1	23	1572	1594	1572	1594	0.96
7	19	0.0015	0.23	13.3	0.7	1	20	1600	1619	1600	1624	0.94
8	19	4.4e-05	0.0068	18.1	1.3	1	23	1698	1720	1698	1720	0.97
9	19	0.0011	0.18	13.6	5.2	1	23	1779	1801	1779	1801	0.96
10	19	0.00066	0.1	14.4	0.7	1	20	1806	1825	1806	1827	0.94
11	19	0.11	17	7.4	0.3	2	23	1838	1859	1838	1859	0.97
12	19	6.7e-05	0.011	17.5	0.6	2	23	1898	1919	1897	1919	0.97
13	19	6.1e-05	0.0096	17.6	1.6	1	23	1924	1946	1924	1946	0.95
14	19	0.0026	0.41	12.5	1.7	1	20	1952	1971	1952	1974	0.93
15	19	1.1e-05	0.0017	20.0	0.4	1	23	1990	2012	1990	2012	0.95
16	19	8.8e-07	0.00014	23.4	0.6	1	23	2018	2040	2018	2040	0.99
17	19	9.6e-05	0.015	17.0	0.2	1	23	2046	2068	2046	2068	0.97
18	19	0.057	8.8	8.3	6.9	1	23	2074	2096	2074	2096	0.96
19	19	0.012	1.9	10.4	0.6	1	20	2102	2121	2102	2123	0.90

Sequence Information

Coding Sequence: ATGGAGGTGAAAACGAGGCAAACGAGGAAATTGCTGGAGCTTCTGCGGCAGCAAGTAGATAAGTTGCATCTATTGCTGACTACCGCTCCCGTTAATCCGTTAGAGATTTCGACTGCAAAGTCGATACTCTATGAGCAACTGCATTCTTTAACTCAGAGATTCAATAATTTAACAGGCGATGATAATTGCGACTATGAAGAGGCAAATGTAAAGGTTGCTGATGCAGCAACAAATTTGAAATATGTGTCTCTACTGAAAAATGTTGACGAGCTTATTAAggatattaaatatgttaagGATATTAAATATGACAATACTGATAGCAATGCAGTCAAACACAAGATGGAATTACTGCTCGATAATCTCATATTAGCTTTACGAACATTAGAAGAATTAGAGTGCTTGCCATTGAAGCAGAGACTTCAGGACTGTCTGGATTACGTTAGAGAAATGAGCACAGCGAACGAGATTGAGGATCTTCAAAATATAAAGGAACTGGGCACTTCAATATTGGAGATACTCGAACCACTACAGAATTACAGAAAAAGTTTAGCGTCTGCTTTCCTGTCACAGAAACTAGCTTTATATACCTCTCAACTATGCACGTCATTCGAGATGCTAGTACAACTGGCTCAGGAGCAGCATCAGTTAAACGCACCGATTTacGCTTGCAAGAAGTACGTTTGCGAGAGAACATGCACGTGCTGCGAAATGATTTTAAACTTGTTGAATGGTCCCAACCCATCGCCGGAAAAGGAAATTTGCGAGAGGGAGAATCATTTCGTCTACAGAATGGATTTGGCATTAGACATTATATTAGAAATACCGGGCAAAACGCGCGAGGAGCAACTATCAGATTGCGCGGAACTGTGGTTGAGACTGGAGGATGTCTTCTCTCATGCTATGGCAATTACTCAAGTGTGTCAGCCGTATAATTTTAAAGCCATAACTGGTTCATGCCAGTCCATAGTGTTGGAATACGAGAAACTAAAACAGCAATTACTATCGGAAATCCCAGATCCGGCGTTAAACAATTTATTCACGCATACCTTGACTGACGCGCTTCACCGTTTGGAACGTAAAGTTAATATAGCGGTATTAACGCTCGCGATGGAGGTGTTCAGCAATCCTTACGCGGCTTTGAAGAAACTCGTTATGACGTGCGGAAATTCGTTAAGCGCGAAAAGAAGATCGAAGAGTGATTTAAACGATCTTATAGAAGACTTTGATCAACTCTTTGATCAAACTGTGCAAATTGGAATATTTGCGATCGCTTGTTGCAAAGACAAGAACCGCAATAACAAAATTCGTAATTGTCTCGCAGGATTCGAATCCTTAGAAACTGAATTAATTTCTGCTATAACTTCCTTCTATCTGCATCCAGATAACAAAGAAATGCGTTCCAGTGTCAAGTTGTTGACTACGCAATGGCAAACAGAGATGAATAAGTTTCAGAATGCCGTAAATCTCATTATAAACTCGGCTGCCTTCTGTCAAGTAGTTATGGACGATCTTCAAGAACGTATAAGAACAATCTCGGATTGTCTGGATAACAGAGAGCCAGTAACGCAGCTTCAAGTGCAAGGTATCGTTCAGCGTGCTTCAGCTTTATCTAGTCAAGTTACAGCGATCGTAGATGACATTGGTCCTGAAAACATCGATTGTCAAACGATAATGATGACAAGAGAATTAAAAGCAGctATATATGAAGCCAACAAAGCTGCAAAAACTCTTCTGGTGGAAAACGCAACGGAGCCTCAACAGTTGCGGGTGATAAAACGGTgtgaattaatattaaatgtcgTTCAAAGATTGCAGCCCGCCCtgtctataattataaacaatacgACGCATGAAAAATCTGCGCGAGGCCAAGGAGATTCCAGTCATGGTAGCGTATCAAATCCCATGAATTTTCCATCTACAATTTACGGTTTGCCGCGCGATAAAAATAGTTTAGTTTACATTAGAACACCCTATACAGTAAAAACGCACAAACCGCAGGTATCCATTCAACCGGCAAACAGTATAGTACAAAAACCGTCGGATTTGTCATATTTGATACCTTACATAAGGAACGGCCGTACATTGCGCAGCGAGCATTCCATTATGTACAATACGCTGCATAAGAACAAAAATATAGCGGAGCCAGCCGTTAAAAACGAGACATCCCCTAGGAATCTGTCTAGCATTAGACAACATCTTTTTAGCAGAGATAGCTTCAGCATTCACGTCGACTTCGATATAGCTGAAGAAAGCATGGATTTAACAGCTGCCTTAAAGAAGATAACTTCGTCGTCCACGTCGGAAAATGCAACGTTCTCGTCGTACCAATTGTCAGAAGTAGAAAACGTATCTTCACAGaacgaaaataagaaattggCTTTCAACATCGTGGAAAAATTATGTCAAACTGGTAGGCCAGAAACGGAAAGCTGTTTAATTGAGTCCGAGATAACGGAGAAGATAGGCAAGTGTATCATATCTGGTGGCGGTGACGCGTCTCTGATTATGGAATCGTGTCAAAAGCTCAATAGCGTTCGATCTCCAAATAAGATACAAAAGTCGACCTCGGAGCAACATGAGTGGTGGGTGAAGGAAGACGGTGCGCGGGACCAGCGAGGAGGAGCGAGGCCGGGCAGCCCGATTCGTTCCCAGGTCGGTCCAAGTCAGTCGGCCGAACAAAACATGGACGCCGTGGAGATAAATACGTCGGGTCCGCCGCAGGGCGAGGACCCGATCGCGTCCGGCATGAAGATATGCCGCGTCTGCCTGCTCGGCAACCTGATGATGCGCGACCTCTTCCTGGAGAGCGAGGTCGCGTCCCTGTCGGCGAAGGCGATGAGCTTCGCCAACGTTAAGATGTTACCAGGCGACGGTCTACCGGCACAGGTGTGCTGCATGTGCGCCGCCAAATTGGAGTCGGCGTACGAGTTTAAGTTACAAGTGGAGCAAGCCGACAATGTTCTTCGAGGAAAGCTCGTCGGTGGAATAATAAAGGAGGAGTTGTTTCTTAATGAAGTCGAAATACACTTGGATGACGAGAGGGATGACAGTATGGAAGAGATTAGTGTCAGTGCTGATTATGAATCTACCACTACGGTATTGCCAGTGGAGTCAGCAGCTGACAAGAACTTTCTGAAAAATCAGTTAATGATTTTGGAAGCTGAGAAATTGTCAGAGACAGAGGAAATTCAACAAGATTCAGAACAAGATAACTCGCAAGAAAGCATTGTGGAAGAATTCCAGCAAGAATTGGCCGACGCGGAAGACAATGATATATCAGATGCTAACGATGAATCTAGGGCTGAAGAAGGTTCTAGCGACGAGAATATCATTCGTAGTTGCACAGATGCAATTCCAACAGAGGAACATGATTACATTATGCAGCAATGTAGTTTGCCTGCTGAACAACTCTCCTTGCAGGAAGAAATGCAGGAAAATGTACCAGAACTTGAACAAGACACAGTTGAATGCCAAGAAACATCGTCTGAACAAAACCAAGAGATTCAAGCTGAGGAAGATCAAGAGATTCAAGCTGAGCAAATTCACGAAATTCAAGTTGAGCAAAACCAAGAGATTCAGGCTGAAATAAACCAAGAGATTCAGGCTGAAATAAATCGAGAGATTCAGGCTGAATTAGATCAAGAAGCTCAAGCTGAGCAGGAGAATCAAGCTGAGCAAAATCAAAATGACACAGAGGTATTATGCAAGGAGGAAACACTCACACCTAATACTAATGAGACAGTGGAACAGGAATCATCCCAGAATGAAACTAGGAGAAGTAAACGTAGATTGGCTCGTCGGATATTTACCGAGCGGAATTCCGACGAGGagaattatttcgaaaatctgAATCTCAGTTCTCGATTGAAAAAAGCACAGTCGGACAAGACGGAGAAGATCTTTTTCATGTGTTACTTGTGCGATAAGCAATTCCTTTCGAAGAGCGTCCTGAAAGAACATATGCATTCCCATGAAGAAGTGAGAAAAGCACTATCTCTGAAGAAAACACTGGAGAAACCGCAGAAGGTGCAGGCCAGCGTTTCCACGAAGACGCCGCCATCCGGAAAGAAAGCCAACAAGTGCCCTTATTGTGGTAAAGAGTATCTGTACATAATCTCGTTTACCAAACACATTAAGCAACACGAGCGGGAGCGGGAGGAAGCGAAGGAGGATCCAATGCCACTCGAGATATCGTTCCATGAAGATGAGCACAGTCTAGACTTCGATAACGGCAACAGATCGGATGGCGAGTGCAAGAAGCGAAAGAGAGGAAATACAGCCGACGATGACGCGAGCGACAGCGATCAGGATAAGAGAAGAAAGCGCAGTCACGTTGAGGAGTTTGCGTGTGACAAATGTTCAGAAAAATTCGACACAAAGCGAGGCTTGCAGAAGCATTCGATCACGCATGTTAGCTTCGAGTGCAGCGTGTGTAACGAGGAGTACGACACTCTGGAACAACTGAGAAATCACCGAACGAAGCACGTGGTCGAAGGAGTGCTCACCGAACAGGATTTGGAAGAGGACATGAAGCAGATGAAGAGCGAGAACAACGATGAAGACAACAAGAACATCGAGATTGAGGAGCACAACGGCGAACCCACCGAAAACACGAAGGAACTGAAGTGCCCGACGTGTTCGATGACGTTCTCGCGTAAGAAAGCGCTGTCCAGACACATTGAGACGACGCACTCCAGCACCCGCTCTTACGAATGCAAGATATGCTGTCAACAATTCATACGGAAGGATCTCCTGCGCAGGCATGCCGAGCAGCACGCACGAGTGAAGACCTACAAGTGTACCCAGTGCAATAAGACCTTCGGCAACGAGCTCACGCTGAGAAATCACCTGGTTGCCACGAATCACAAGACATTCGTACACGGGCAGGAATACGATCCGAATAAGCGTATAAAGCGCGTGGCGGCGAGAGCGGCGCAGAAGATCATCGACAAGATCAAGACGGAGGACGGCCTCGAGGATTACGACGACGATAACGACGACAATACCGATTACGACGCCAAGTTGGACGGGCATTATCGCCGTAAGCGCGACGCTACACCAAAGAAGTACAGTTATAAGAAGGAGTTTGAGTGCGCGACCTGTAACAAGAGGTACAGCTCGAAGCAAGCGTTGACAAAGCACATGGAGCAGCATGTGAAGGAGGAGAAAGCGGAGAAGGCAGCGGAGAAGGCGGCGGAGAAGCTGAAGAAGGCCGCTTTGGAGAAGAAGGAAGCGCAGAAGAAGGAGACGACTAGCAGCACAGGCGATAACGATGATGACGATAACGACTCCGACTTCGAGAGCGGCCTCGACTGGCCGATGGACAGTCACGAATGCACCACGTGCAAGAAACGATACAGCACGAAGAAGTCGCTGCTGCGCCACCGGCTGCTGCACGAGGAGCCGAACTTCGAGTGTGACATCTGCAACGTCAAGTTCTACCGCAAGGACAAGCTGAAGGCGCACTACGACAAGTGTTCCGAGAAGAATCCCGACCAGGTGAGGAAGTGCAATATCTGCGGCGACAGCTTCGAGAACAACGAGATCCTGCGCGAGCACAGAGCCAAGCACGTCACTGAAGGTATCTTAACGGAGGAGGATCTGAGGGACATCGAGCCGAAATCCGAAGAGAAGAAACCGGGCGAGAAGATCGGTCGGAAGAGGAGGACCGATATTGTGGGGCTCGAGTGTACCGAATGCAACAAACAGTACACCTCCAGAAAAGGTCTACTGCGGCACATTCAGGTGCACGAGGGCAAGAAGTACCTGTGCGACATATGCCCGAAGAAGTTCTACCGGCGGGAACATCTGAAGATCCACGTGGCCAAGCACAACATGATCAAGCCGTACAAATGCACCCGATGCACCAAGCGCTTCATCAAGGAGGAGCAGCTCAACAATCACCTGCCTAAGCACGAACGCACGTTCAAGAAGGCCAAGGAGACCGACAGCTCCAAGAGATTCCTCTGCGAGATTTGCAGCAAGAGCTTCACGCAATCGACGACGCTGATAGCGCATCTGCGCGCCCACAACGGTATCAAGCCGTACGTCTGCGAGGTATGCTCCAGGCCGTTCACCACCAACGCCTACTTGAAGATGCATatgcgcacgcacacgcaggAACGTCCGTACATCTGCCAGTACTGTTCGCGAGCGTTCGCGCGCGCCGATACCTTGGCGAATCATCTGACGTCGCACACTGGCGAGGCCAAGTATCACTGCAAGTGCTGTCCGAAGAACTTCCGACGATTGAAATCGCTGAAGGAGCACATGTTTATTCATACGGGTCAGCGGCCTTACGAGTGTCCAACTTGCGACAGGAAGTTCAACAATAATGGCAGCCGCTATGCGCACAGCAAGCGGTGCAAGCAGAATCTTTTGCAGAATCAGAACCGGGCGCAGCAGATGATCCAGCAGACGACACAGcatcagcagcagcagcagcagcagcagcagcaacagcagcagccgCAGCAAGTGCAGATACAGGTGCAGCAGCAGCCGCATTCAGTCAGGTTGCATCAAACCATCGGCCAGGCGCAAGTAGTCAAGGCGCAGAACATCAAAACGATCGCTATAGCGAGACCGGCTGAGCCTACCACGGTAACCACGGCGCAACAAGTTATGCAGCATCAGGAGATACTAATGCCTCTAATTCTGCCGCTTACCGTCACTCTCACGGACGTAGGCGAGGAGGTGATACTACCCGAGGGTACAAAGATATACACCACCTCTTAA
Protein Sequence: MEVKTRQTRKLLELLRQQVDKLHLLLTTAPVNPLEISTAKSILYEQLHSLTQRFNNLTGDDNCDYEEANVKVADAATNLKYVSLLKNVDELIKDIKYVKDIKYDNTDSNAVKHKMELLLDNLILALRTLEELECLPLKQRLQDCLDYVREMSTANEIEDLQNIKELGTSILEILEPLQNYRKSLASAFLSQKLALYTSQLCTSFEMLVQLAQEQHQLNAPIYACKKYVCERTCTCCEMILNLLNGPNPSPEKEICERENHFVYRMDLALDIILEIPGKTREEQLSDCAELWLRLEDVFSHAMAITQVCQPYNFKAITGSCQSIVLEYEKLKQQLLSEIPDPALNNLFTHTLTDALHRLERKVNIAVLTLAMEVFSNPYAALKKLVMTCGNSLSAKRRSKSDLNDLIEDFDQLFDQTVQIGIFAIACCKDKNRNNKIRNCLAGFESLETELISAITSFYLHPDNKEMRSSVKLLTTQWQTEMNKFQNAVNLIINSAAFCQVVMDDLQERIRTISDCLDNREPVTQLQVQGIVQRASALSSQVTAIVDDIGPENIDCQTIMMTRELKAAIYEANKAAKTLLVENATEPQQLRVIKRCELILNVVQRLQPALSIIINNTTHEKSARGQGDSSHGSVSNPMNFPSTIYGLPRDKNSLVYIRTPYTVKTHKPQVSIQPANSIVQKPSDLSYLIPYIRNGRTLRSEHSIMYNTLHKNKNIAEPAVKNETSPRNLSSIRQHLFSRDSFSIHVDFDIAEESMDLTAALKKITSSSTSENATFSSYQLSEVENVSSQNENKKLAFNIVEKLCQTGRPETESCLIESEITEKIGKCIISGGGDASLIMESCQKLNSVRSPNKIQKSTSEQHEWWVKEDGARDQRGGARPGSPIRSQVGPSQSAEQNMDAVEINTSGPPQGEDPIASGMKICRVCLLGNLMMRDLFLESEVASLSAKAMSFANVKMLPGDGLPAQVCCMCAAKLESAYEFKLQVEQADNVLRGKLVGGIIKEELFLNEVEIHLDDERDDSMEEISVSADYESTTTVLPVESAADKNFLKNQLMILEAEKLSETEEIQQDSEQDNSQESIVEEFQQELADAEDNDISDANDESRAEEGSSDENIIRSCTDAIPTEEHDYIMQQCSLPAEQLSLQEEMQENVPELEQDTVECQETSSEQNQEIQAEEDQEIQAEQIHEIQVEQNQEIQAEINQEIQAEINREIQAELDQEAQAEQENQAEQNQNDTEVLCKEETLTPNTNETVEQESSQNETRRSKRRLARRIFTERNSDEENYFENLNLSSRLKKAQSDKTEKIFFMCYLCDKQFLSKSVLKEHMHSHEEVRKALSLKKTLEKPQKVQASVSTKTPPSGKKANKCPYCGKEYLYIISFTKHIKQHEREREEAKEDPMPLEISFHEDEHSLDFDNGNRSDGECKKRKRGNTADDDASDSDQDKRRKRSHVEEFACDKCSEKFDTKRGLQKHSITHVSFECSVCNEEYDTLEQLRNHRTKHVVEGVLTEQDLEEDMKQMKSENNDEDNKNIEIEEHNGEPTENTKELKCPTCSMTFSRKKALSRHIETTHSSTRSYECKICCQQFIRKDLLRRHAEQHARVKTYKCTQCNKTFGNELTLRNHLVATNHKTFVHGQEYDPNKRIKRVAARAAQKIIDKIKTEDGLEDYDDDNDDNTDYDAKLDGHYRRKRDATPKKYSYKKEFECATCNKRYSSKQALTKHMEQHVKEEKAEKAAEKAAEKLKKAALEKKEAQKKETTSSTGDNDDDDNDSDFESGLDWPMDSHECTTCKKRYSTKKSLLRHRLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRAKHVTEGILTEEDLRDIEPKSEEKKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEEQLNNHLPKHERTFKKAKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKCCPKNFRRLKSLKEHMFIHTGQRPYECPTCDRKFNNNGSRYAHSKRCKQNLLQNQNRAQQMIQQTTQHQQQQQQQQQQQQQPQQVQIQVQQQPHSVRLHQTIGQAQVVKAQNIKTIAIARPAEPTTVTTAQQVMQHQEILMPLILPLTVTLTDVGEEVILPEGTKIYTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01406730;
90% Identity: iTF_00885323;
80% Identity: -