Basic Information

Insect: Temnothorax longispinosus
Gene Symbol: -
Assembly: GCA_004794745.1
Location: QBLH01000331.1:77837-86958[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.024 1.9 8.7 3.1 1 23 1322 1344 1322 1344 0.97

2 17 0.02 1.6 8.9 0.5 2 23 1380 1401 1379 1401 0.96

3 17 0.0046 0.36 10.9 2.7 1 23 1468 1490 1468 1490 0.96

4 17 0.00062 0.048 13.7 0.7 1 23 1493 1515 1493 1515 0.98

5 17 1.1e-05 0.00083 19.2 1.1 2 23 1562 1584 1561 1584 0.96

6 17 0.0042 0.33 11.1 3.1 1 23 1590 1612 1590 1612 0.96

7 17 0.00079 0.062 13.3 0.7 1 20 1618 1637 1618 1642 0.94

8 17 6.1e-05 0.0048 16.8 1.3 1 23 1716 1738 1716 1738 0.97

9 17 0.00043 0.034 14.2 5.8 1 23 1797 1819 1797 1819 0.97

10 17 0.00037 0.029 14.4 0.6 1 20 1824 1843 1824 1845 0.94

11 17 0.059 4.6 7.4 0.3 2 23 1856 1877 1856 1877 0.97

12 17 3.6e-05 0.0028 17.6 0.6 2 23 1916 1937 1915 1937 0.97

13 17 3.3e-05 0.0026 17.7 1.6 1 23 1942 1964 1942 1964 0.95

14 17 0.0014 0.11 12.6 1.7 1 20 1970 1989 1970 1992 0.93

15 17 5.8e-06 0.00045 20.1 0.4 1 23 2008 2030 2008 2030 0.95

16 17 4.7e-07 3.7e-05 23.5 0.6 1 23 2036 2058 2036 2058 0.99

17 17 5.1e-05 0.004 17.1 0.2 1 23 2064 2086 2064 2086 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.024	1.9	8.7	3.1	1	23	1322	1344	1322	1344	0.97
2	17	0.02	1.6	8.9	0.5	2	23	1380	1401	1379	1401	0.96
3	17	0.0046	0.36	10.9	2.7	1	23	1468	1490	1468	1490	0.96
4	17	0.00062	0.048	13.7	0.7	1	23	1493	1515	1493	1515	0.98
5	17	1.1e-05	0.00083	19.2	1.1	2	23	1562	1584	1561	1584	0.96
6	17	0.0042	0.33	11.1	3.1	1	23	1590	1612	1590	1612	0.96
7	17	0.00079	0.062	13.3	0.7	1	20	1618	1637	1618	1642	0.94
8	17	6.1e-05	0.0048	16.8	1.3	1	23	1716	1738	1716	1738	0.97
9	17	0.00043	0.034	14.2	5.8	1	23	1797	1819	1797	1819	0.97
10	17	0.00037	0.029	14.4	0.6	1	20	1824	1843	1824	1845	0.94
11	17	0.059	4.6	7.4	0.3	2	23	1856	1877	1856	1877	0.97
12	17	3.6e-05	0.0028	17.6	0.6	2	23	1916	1937	1915	1937	0.97
13	17	3.3e-05	0.0026	17.7	1.6	1	23	1942	1964	1942	1964	0.95
14	17	0.0014	0.11	12.6	1.7	1	20	1970	1989	1970	1992	0.93
15	17	5.8e-06	0.00045	20.1	0.4	1	23	2008	2030	2008	2030	0.95
16	17	4.7e-07	3.7e-05	23.5	0.6	1	23	2036	2058	2036	2058	0.99
17	17	5.1e-05	0.004	17.1	0.2	1	23	2064	2086	2064	2086	0.97

Sequence Information

Coding Sequence: ATGTGCCTGCGCCGTGGGGATCGAGAGAAAAATCCGACGATGGAGGTGAAAACGGGGCAAACGAGGAAGTTGCTGGAGCTCCTGCGGCAGCAAGTGGACAAGTTACATCTGTTGCTGACTACCGCTCCCGTTAATCCGTCAGAAATTTTGACCGCAAAGTCAGTACTCTACGAGCAACTGCATTCTTTAACTCAGAGATTCAACAATTTAACAGGCGATGATAATTGCGACTATGAGGAGGCAAATGTAAAGTTTGCTGATGCAGcaacaaatttgaaatatgtttCTCTATTGAAAAATGTCGACGAGCTTATTAAGGATATTAAATATGACAATACTGATGGCAATGCAGTCAAACATAAGATGGAATTACTGCTCGATAATCTCGTGTTAGCTTTACGAACATTAGAAGAATTAGAGTGCTTGCCGTTGAAGCAGAGACTTCAGGACTGTCTGGATTACGTTAGAGAAATGAGCACAGCGAACGAGATTGAGGATCTTCAAAATATAAAGGAACTGGGCACTTCAATATTGGAGATACTCGAACCACTGCAGAATTACAGAAAAAGTTTAGCGTCTGCTTTCCTGTCACAGAAACTAGCTTTATATACCTCTCAACTGTGCACGTCATTCGAGATGCTAGTACAACTGGCTCAGGAGCAGCATCAGTTAAATGCGCCgatttacGCTTGCAAGAAGTACGTTTGCGAGAGAACATGTACGTGCTGCGAAATGATTTTAAACTTGTTGAACGGTCCCAACCCATCGCCGGAAAAGGAAACTTGCGAGAGGGAGAATCATTTCGTCTACAGAATGGATTTGGCATTAGACATTGTATTAGAAATACCGGGCAAAACGCGCGAGGAGCAACTATCCGAATGCGCGGAACTGTGGTTGAGACTGGAGGATGTCTTCTCTCATGCTATGGCAATTACTCAAGTGTGTCAGccgtataattttaaagccATAACTGGTTCGTGCCAGTCCATAGTGTTGGAATACGAGAAACTAAAACACCAATTACTATCGGAAATCCCTGATCCGGCGTTAAACAATTTGTTCACGCATACCTTGACTGACGCGCTTCATCGTTTGGAACGTAAAGTTAACATAGCTGTATTAACGCTCGCGATGGAGGTGTTCAGCAATCCTTACGCGGCTTTGAAGAAACTCGTTATGACGTGCGGAAATTCGTTGAGCGCGAAAAGAAGATCGAAGAGTGATTTAAACGATCTCATAGAAGACTTTGATCAACTCTTTGATCAAACTGTGCAAATTGGAATATTTGCGATCGCTTGTTGCAAAGACAAGAACCGCAATAACAAAATTCGTAATTGTCTCGCAGGATTCGAATCCTTAGAAACTGAATTAATTTCTGCTATAACTTCCTTCTATCTGCATCCAGATAACAAAGAAATGCGTTCCAGTGTCAAGTTGTTGACTACGCAATGGCAAATAGAGATGAATAAGTTTCAGAATGCCGTAAATCTCATTATAAACTCGGCTGCCTTCTGTCAAGTAGTTATGGACGATCTTCAAGAACGTATAAGAACAATCTCGGATTGTCTGGATAACAGAGAGCCAGTAACGCAGCTTCAAGTGCAAGGTATCGTTCAGCGTGCTTCAGCTTTATCTAGTCAAGTTACAGCGATCGTAGACGACATTGGTCCTGAAAACATCGATTGTCAAACGATAATGATGACGAGAGAATTAAAAGCAGctaTATATGAAGCCAACAAAGCTGCAAAAACTCTTCTGGTGGAAAACGCAACGGAGCCTCAACAGTTGCGGGTGATAAAACGGtgtgaattaatattaaatgtcgtTCAAAGATTGCAGCCCGCCctgtctataattataaacaatacgACGCATGAAAAATCTGCGAGAGGCCAAGGAGATTCCAGTCATGGTAGCGTATCAAATGCCATGAATTTTCCATCTACAATTTACGGTTTgccgcgcgataaaaatagtTCGGTTTACATTAGAACGCCCTATACAGTAAAAACGCACAAACCGCAGGTATCCATTCAACCGGCAAACAGTATAGTACAAAAACCGTCGGATTTGTCATATTTGATACCTTACATAAGGAACGGCCGTACATTGCGCAGCGAGCATTCCNTTATGTACAATACGCCGcataagaacaaaaatatagcGGAGCCAGCCGTTAAAAACGAGATATCCCCTAGGAATCTGTCTAGCATTAGACAACATCTTTTTAGCAGAGATAGCTTCAGTATTCACGTCGACTTCGACATAGCTGAAGAAAGCATGGATTTAACAGCTGCCTTAGCGAAGATAACTTCGTCGTCCacgtcggaaaatgcaacgTTCTCGTCGTGCCAATTGTCAGAAGTAGAAAACGTATCTTCACAGAACGTAAATAAGAAATTGGCTTTCAACATCGTGGAAAAACTATGCCAAACTGGTAGGCCAGAAACGGAAAGCTGTTTAATTGAGTCCGAGATAACGGAGAAGATAGGAAAATGTACCATATCTGGTGGCGGTGACGCGTCTCTGATCATGGAGTCGTGTCAAAAGCTCAATAGCGTTCGATctccaaataaaatacaaaattcgaCCTCGGGGCAACATGAGACGGTGCGCGGGACCAGCGAGGAGGAGCGTGGCCGGGCAGCCCGATTCGTTCCCAGGTCGGTCCAAGTCAGTTCCGCCGAACGAAACATGGACGCCGTGGAGATAAATACGTCGGGTCCGCCGCAGGGCGAGGACGCGATCGCGTCCGGCATGAAGATATGCCGCGTCTGCCTGCTCGGCAACCTGATGATGCGCGACCTTTTCCTGGAGAGCGAGGTCGCGTCCCTGTCGGCGAAAGCGATGAGCTTCGCCAACGTTAAGATGTTACCAGGCGACGGTCTACCGGCACAGGTGTGCTGCATGTGCGCCGCCAAGTTGGAGTCGGCGTACGAGTTTAAGTTACAAGTGGAGCAAGCCGACAACGTTCTTCGAGGAAAGCTCGTCGGTGGAATAATAAAGGAGGAGTTGTTTCTTAATGAAGTCGAAATACACTTGGATGCCGAGAGAAATGACAATATAGAAGAGATAAGTGTCAGTACTGATTATGAATCTACCACTACGGTATTGCCAGTGGAGTCAGCAGCTGACAAGAACTTTCTGAAAAATCagttaataattttggaaGCTGAGAAATTGTCAGAGACAGAGGAAATTCAACAAGATTCAGAACAAGATAACTCGCGAGAAAGCATTGTGGAAGAATTGCAGCAAGAATTGGCCGACGCGGAAGACAATGATATATCAGATGGTATCGATGAATCTAGGGCGGAAGAAGCTTCCAGCGACGAGAATATCATTCGAAGTTGCGCAGATGCAATTCCAACAGAGGAACATGATTACATTATGCAGCAATGTAGTTTGCCTGCTGAACAACTCTCCTTGCAGGAAGAAATGCAGGAAAATGTACCAGAACTTGAGCAAGACACACTTGAATGCCAAGAAACATCGTCTGAACAAAACCAAGAGATTCAGGCTGAACAAAATCAAGAGATTCAAGCTGAGGAAGATCAAGAGATTGAAACTGAGCAAATTCACGAAATTCAAGCTGAGCAAAACCAAGAGATTCAGGCTGAAATAAACCAAGAGATTCAGGTTGAAATAAATCAAGAGATTCAGGCTGAAATAAATCAAGAGATTCAGGCTGAATTAGATCAAGAAGCTCAAGTTGAGCAGGAGAATCAAGCTGAGCAAAATCAAAATGACATAGAGGTATTATTCAAGGAGGAAACGCTCACAGCTAATACTGATGAGCCAGTGGAACAGGAATCATCCCAGAATGAAACGAGGAGAAGTAAACGTAGATTGGCTCGTCGGATATTTACCGAGCGGAATTCCGACGAGGagaattatttcgaaaatttgaaTCTCAGTTCTCGATTGAAAAAAGCGCAGTCAGACAAGACGGAGAAGATCTTTTTCATGTGTTACTTGTGCGATAAGCAATTCCTTTCGAAGAGCGTCCTGAAAGAACATATGCATTCCCACGAAGAAGTGAGAAAAACACTATCTCTGAAGAAAACACCGGAGAAACCGCAGAAGGTGCAGGCCGGCGCTTCCGCGAAGACGCCGCCATCCGGAAAGAAAGCCAACAAGTGCCCTTATTGTGGTAAAGAGTATCTGTACATAATCTCGTTTACCAAACACATTAAGCAACACGAGCGGGAGCGGGAGGAAGCGAAGGAGGATCCAATGCCACTCGAGATATCGTTCCATGAGGATGAGCACAGTCTAGACTTCGATAGCGGCAACAGATCGGATAGCGAGTGCAAGAAACGAAAGAGAGGAAATACAGCCGACGATGACACGAGCGACAGCGATCAggataaaagaagaaagcgCAGTCACGTTGAGGAGTTTGCGTGTGACAAATGTTCAGAAAAATTCGACACAAAGCGAGGCTTGCATAAGCATTCGATCACGCATGTTAGCTTCGAATGCAGCGTGTGTAACGAGGAGTACGACACTCTGGAACAACTGAGAAATCATCGAACGAAGCACGTGGTCGAAGGAGTGCTCACCGAACAGGATTTGGAAGAGGACATGAAGCAGATGAAGAGCGAGAACAACGATGAAGACAACAAGAACATCGAGATTGAGGAGCGCAACGGCGAACCCACCGAAAACACGAAGGAACTGAAGTGCCCGACGTGCTCGATGACGTTCTCGCGTAAGAAAGCGCTGTCCAGACACATTGAGACGACGCACTCCAGCACCCGCTCTTACGAATGCAAGATATGCTGTCAACAATTCACACGGAAGGATCTCCTGCGCAGGCATGCCGAGCAGCACGCACGAGTGAAGACCTACAAGTGTACCCAGTGCAATAAGACCTTCGGCAACGAGCTCACGCTGAGAAATCACCTGGTTGCCACGAATCACAAGACATTCGTACACGGGCAGGAATACGATCCGAATAAGCGTATAAAGCGCGTGGCGGCGAGAGCGGCGCAGAAGATCATCGACAAGATCAAGACGGAGGACGGCCTCGAGGATTACgacgacgataacgacgacAATACCGATTACGACGCCAAGTTGGACGGGCATTATCGCCGTAAGCGCGACGCTACACCAAAGAAGTACAGTTATAAGAAGGAGTTTGAGTGCGCGACCTGTAGCAAGAGGTACAGCTCGAAGCAAGCGTTGACAAAGCACATGGAGCAGCATGTGAAGGAGGAGAAAGCGGAAAAAGCAGCGGAGAAGGCGGCGGAGAAGCTGAAGAAAGCCGCTTTGGAGAAGAAGGAGGCGCAGAAGAAGGAGACGACGAGCAGCATCGGTGATAACGATGATGACGATATCGACTCCGATTTCGAGAGCGGCCTCGACTGGCCGATGGACAGTCACGAATGCACCACGTGCAAGAAACGATACAGCACGAAGAAGTCGCTGCTGCGNCACCAGCTGNTGCACGAGGAGCCGAACTTCGAGTGTGACATCTGCAACGCCAAGTTCTATCGCAAGGACAAGCTGAAGGCGCACTACGACAAGTGTTCCGAGAAGAATCCCGACCAGGTGAGGAAGTGCAATATCTGCGGCGACAGCTTCGAGAACAACGAGATCCTGCGCGAGCACAGAGCCAAGCACGTCACTGAAGGCATCTTAACGGAGGAGGATCTGAGGGACATCGAGCCGAAATCCGAAGAGAAGAAACCGGGCGAGAAGATCGGTCGGAAGAGGAGAACCGATATCGTGGGGCTCGAGTGTACCGAATGCAACAAACAGTACACCTCCAGAAAAGGTCTACTGCGGCACATTCAGGTGCACGAGGGCAAGAAGTACCTGTGCGACATATGCCCGAAGAAGTTCTACCGGCGGGAACATCTGAAGATCCACGTGGCCAAGCACAACATGATCAAGCCGTACAAATGCACCCGATGCACCAAGCGCTTCATCAAGGAGGAGCAGCTCAACAATCACCTGCCTAAGCACGATCGCACGTTCAAGAAGACCAAGGAGACCGACAGCTCCAAGAGATTCCTCTGCGAGATCTGCAGCAAGAGCTTCACGCAATCGACGACGCTGATAGCGCATCTGCGCGCCCACAACGGTATCAAGCCGTACGTGTGCGAGGTATGCTCCAGGCCGTTCACCACCAACGCCTACTTGAAGATGCATatgcgcacgcacacgcaggAACGTCCGTACATCTGCCAGTACTGTTCGCGAgcgttcgcgcgcgccgaCACCTTGGCGAATCATCTGACGTCGCACACTGGCGAGGCCAAGTATCACTGCAAGTGCTTTATGCAGCATCAGGAGATACTGATGCCTCTAATCCTGCCGCTTACCGTCACTCTCACCGACGTAGGCGAGGAGGTGATACTACCCGAGGGTACAAAGATATACACCACCTCTTAA
Protein Sequence: MCLRRGDREKNPTMEVKTGQTRKLLELLRQQVDKLHLLLTTAPVNPSEILTAKSVLYEQLHSLTQRFNNLTGDDNCDYEEANVKFADAATNLKYVSLLKNVDELIKDIKYDNTDGNAVKHKMELLLDNLVLALRTLEELECLPLKQRLQDCLDYVREMSTANEIEDLQNIKELGTSILEILEPLQNYRKSLASAFLSQKLALYTSQLCTSFEMLVQLAQEQHQLNAPIYACKKYVCERTCTCCEMILNLLNGPNPSPEKETCERENHFVYRMDLALDIVLEIPGKTREEQLSECAELWLRLEDVFSHAMAITQVCQPYNFKAITGSCQSIVLEYEKLKHQLLSEIPDPALNNLFTHTLTDALHRLERKVNIAVLTLAMEVFSNPYAALKKLVMTCGNSLSAKRRSKSDLNDLIEDFDQLFDQTVQIGIFAIACCKDKNRNNKIRNCLAGFESLETELISAITSFYLHPDNKEMRSSVKLLTTQWQIEMNKFQNAVNLIINSAAFCQVVMDDLQERIRTISDCLDNREPVTQLQVQGIVQRASALSSQVTAIVDDIGPENIDCQTIMMTRELKAAIYEANKAAKTLLVENATEPQQLRVIKRCELILNVVQRLQPALSIIINNTTHEKSARGQGDSSHGSVSNAMNFPSTIYGLPRDKNSSVYIRTPYTVKTHKPQVSIQPANSIVQKPSDLSYLIPYIRNGRTLRSEHSXMYNTPHKNKNIAEPAVKNEISPRNLSSIRQHLFSRDSFSIHVDFDIAEESMDLTAALAKITSSSTSENATFSSCQLSEVENVSSQNVNKKLAFNIVEKLCQTGRPETESCLIESEITEKIGKCTISGGGDASLIMESCQKLNSVRSPNKIQNSTSGQHETVRGTSEEERGRAARFVPRSVQVSSAERNMDAVEINTSGPPQGEDAIASGMKICRVCLLGNLMMRDLFLESEVASLSAKAMSFANVKMLPGDGLPAQVCCMCAAKLESAYEFKLQVEQADNVLRGKLVGGIIKEELFLNEVEIHLDAERNDNIEEISVSTDYESTTTVLPVESAADKNFLKNQLIILEAEKLSETEEIQQDSEQDNSRESIVEELQQELADAEDNDISDGIDESRAEEASSDENIIRSCADAIPTEEHDYIMQQCSLPAEQLSLQEEMQENVPELEQDTLECQETSSEQNQEIQAEQNQEIQAEEDQEIETEQIHEIQAEQNQEIQAEINQEIQVEINQEIQAEINQEIQAELDQEAQVEQENQAEQNQNDIEVLFKEETLTANTDEPVEQESSQNETRRSKRRLARRIFTERNSDEENYFENLNLSSRLKKAQSDKTEKIFFMCYLCDKQFLSKSVLKEHMHSHEEVRKTLSLKKTPEKPQKVQAGASAKTPPSGKKANKCPYCGKEYLYIISFTKHIKQHEREREEAKEDPMPLEISFHEDEHSLDFDSGNRSDSECKKRKRGNTADDDTSDSDQDKRRKRSHVEEFACDKCSEKFDTKRGLHKHSITHVSFECSVCNEEYDTLEQLRNHRTKHVVEGVLTEQDLEEDMKQMKSENNDEDNKNIEIEERNGEPTENTKELKCPTCSMTFSRKKALSRHIETTHSSTRSYECKICCQQFTRKDLLRRHAEQHARVKTYKCTQCNKTFGNELTLRNHLVATNHKTFVHGQEYDPNKRIKRVAARAAQKIIDKIKTEDGLEDYDDDNDDNTDYDAKLDGHYRRKRDATPKKYSYKKEFECATCSKRYSSKQALTKHMEQHVKEEKAEKAAEKAAEKLKKAALEKKEAQKKETTSSIGDNDDDDIDSDFESGLDWPMDSHECTTCKKRYSTKKSLLRHQLXHEEPNFECDICNAKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFENNEILREHRAKHVTEGILTEEDLRDIEPKSEEKKPGEKIGRKRRTDIVGLECTECNKQYTSRKGLLRHIQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFIKEEQLNNHLPKHDRTFKKTKETDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKCFMQHQEILMPLILPLTVTLTDVGEEVILPEGTKIYTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01407572; iTF_00885323;
90% Identity: -
80% Identity: -