Tnyl000886.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Temnothorax nylanderi
Gene Symbol
Hr39
Assembly
GCA_030848795.1
Location
JASTWM010000005.1:685801-690042[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.8 4e+04 -5.1 8.4 127 164 33 71 19 95 0.60
2 4 0.67 1.5e+04 -3.7 6.9 81 163 306 396 229 415 0.61
3 4 2 4.5e+04 -7.9 9.8 82 159 428 498 404 541 0.38
4 4 4.7e-74 1.1e-69 237.2 1.4 1 408 608 1001 608 1001 0.71

Sequence Information

Coding Sequence
ATGTCAGAGCAAAACGGGCCCAGCGAGGGCCCAGGGCCAGGGCCCGGCACGGATTCGGGCTGGTGGCCAAACACGCAGTCTTGGAAATCGTCGGCGGCCGCCTCGTCGTCGACCTCGTCGACTCCCACTTCGGCGGCAGGTTCCGCATCCGTTTCTGTCTCCTGCTCCGCGTCCAGCTCATCCTCGACGAGCTCTTCCACCTCGGCCAACTCGTCCGCGACTTGTTGCCCCTCGTCCTGCATCGGCGTGTCCTGCACGATGAGCCCAAGCCGCTCCACGGAAACGGGGAAAAACGTGTCCGTCACCACTATTAACGTACCGCCCAATCAAGAAATGCACGATGGTAAAGGAGTATGTAAATATCTCGGAGGGCAGAATGGCGTGACGGTGTCGGTGGTATCGACCTCGGTACTGGGATGCGGAAACGCGAACGCCATACCGACAAGCGGAATCTGCACGAATACGGGGCCGCATAGTATCGGTATCGGAATCGGCGGCATCCTCGCCGCGAACGCGGCCGACATCGATGATCCCGAGGACAGCGACGGCGAGATCAGCAAGATCGACTTTAGAGGCGTCAATCTACGTTCGAAGAAGAAACGCGACGTATCGGGTAATCAGAATGGCGACAAAATCGGTGACGGAGATGCAAACGGCGACGGCGGGGGATGTTGCGATGACAATTCGCAACAGCAGCCAGAGAGGCCTATGTCATGGGAGGGTGAACTATCGGACCAAGAAATGTCTTCCAATACAATTACTAATCAGGATCACAATGAGGAAACGTCTATGGAGGGGGTTCAAGTATGCAGCACGAGCCCTGGGCCCATGGAACAGAAATTTCCTATCAAGTCGGAACCGGATTTTCGATCCAGCCCAGGTTTCACAATAGGATCCTTTCACGATGGTGGACTGCCCATGACACACAATCAACAActgcagcaacagcaacagcaacaacgcGGTATCGAAAATCTCGAACAGACGCAACAGAGCGACCTACCGCTTCTCGTAGGCAAGCTTCTCGGTGGATACAACAACTCGACGCCTAATCACAGTCCTGTTCTCAATCCGCGACATCATCTAACTAAACACAGTCATACTAGATCGCAGGTGCCGTCACCAGATTCCGCCATTCATTCCGCGTATAGTGTCTTCAGTTCACCAACCCAGAGCCCCCACGCGGCACGGCATTCCGCTCTAGGAGCGGGCAGTCCGATACCCTCCTCGTCGCTGTCCCTCTCTCGACACAGCTTCAACAATTCGACCTCCTCGTTATCCTTATCGCTGTCGCATTCGCTTTCGAGGAACAATTCCGACGCTTCCAGTAGCTGCTACAGCTACGGCTCGCTTAGCCCGCCTACACATTCACCCGTCCAGCAGTCGAGACATCCGCATTCGCACTCGCAACATCATCAGCATCAAGTGGCGCAAGGTAGTCCGCTGCATCTACCAGCCTCGTCCGCAGTCGCCGCACATCATTACTCGTCCTCTTCCGTACCAGGCTCGGAACTATCGCCGGACGGTCATGCTGTCGCGGAGGATCAGGAAGACTGTAGGATACCCTCAGCGCCGTCGGGTATCTCCACAAGGCAACAACTGATCAACAGCCCCTGCCCGATTTGCGGCGACAAGATAAGCGGCTTCCATTACGGCATCTTCTCGTGTGAATCGTGCAAGGGATTCTTCAAGCGCACCGTCCAGAATCGCAAGAACTATGTGTGCCTTAGAGGCGCAGGCTGTCCGGTCACCGTGGCTACGAGGAAGAAGTGCCCGGCCTGCCGCTTCGACAAGTGCCTCAACATGGGTATGAAACTCGAGGCGATCAGGGAGGATCGTACCAGAGGCGGTAGAAGCACTTATCAATGTACCTACACTCTACCGGCAAATCTCGTTGGTAGTTCTGCCGGCGGTATGACCAGTGAAAAACTGACAACGGCGGGCAATTGCAGCCCGGCACCGGCCGGTAGCGAGCACCATTATTCCGTTAGATACCATTCAAATCATTCTCACAAGATACAAGTAGTACCTCAACTTTTGCAAGACATCATGGATGTGGAACATCTTTGGCATTATAACGACAATGATCGGGTAAGCGGCAGTGGAGGGGTACTTGGAAGTGCAAGGAATAATATTGGTGACAGTATGCTGTTCGGTGGATCCGGAAGTGGTCTGACGCCCAGCGGTATTGGAACCGCGACCGGTATTGGCGCCGGAAACAACGGAGGTGCGGTGGAATGTTTGTCGAATGACTCTAGTAACGTCGATACTAATAGTAAGAAAGGAGAGACGGCGAGCCCTGCCAGTTCGACCTCAACGGGGGCGTCTGATCAACATTCCACAAATGGCAATACCACCAACAATAGTAATTCTCAAATCGCCAGTAATTCCAATGGCAATTCAGCGCAGCATCCGGACTTTCTATCTAATCTGTGCAACATCGCGGATCATCGGCTTTATAAGATCGTCAAGTGGTGCAAGAGTCtgccattatttaaaaatatctcgatCGACGATCAAATCTGTTTGTTGATCAACTCTTGGTGCGAGCTACTACTTTTCTCCTGCTGTTTTCGCAGCATGAGCACTCCCGGTGAGATAAGAGTGTCTCTTGGCAAGTCGATTACTCTAGAACAAGCAAGACAGCTTGGTTTAGCGACTTGCATCGAGAGGATGCTCGCTTTTACCGACAATCTGCGAAGACTGAGAGTAGACCAATACGAATATGTTGCAATGAAGGTGATCGTGCTGTTAACATCCGATACAAGCGAATTAAAGGAGCCTGAGAAAGTCAGAGCCTCTCAGGAAAAGGCCCTTCAAGCACTGCAGCAATATACAATCGCGAGGTATCCAGAAATGCCTGCCAAATTCGGTGAACTATTGTTGAGAATTCCAGATCTACAAAGAACATGTCAAGCAGGAAAAGAATTGCTCAGTGCAAAACGCGCCGAGGGAGAAGGCAGCTCGTTTAACCTTTTAATGGAATTGTTGAGAGGAGATCACTGA
Protein Sequence
MSEQNGPSEGPGPGPGTDSGWWPNTQSWKSSAAASSSTSSTPTSAAGSASVSVSCSASSSSSTSSSTSANSSATCCPSSCIGVSCTMSPSRSTETGKNVSVTTINVPPNQEMHDGKGVCKYLGGQNGVTVSVVSTSVLGCGNANAIPTSGICTNTGPHSIGIGIGGILAANAADIDDPEDSDGEISKIDFRGVNLRSKKKRDVSGNQNGDKIGDGDANGDGGGCCDDNSQQQPERPMSWEGELSDQEMSSNTITNQDHNEETSMEGVQVCSTSPGPMEQKFPIKSEPDFRSSPGFTIGSFHDGGLPMTHNQQLQQQQQQQRGIENLEQTQQSDLPLLVGKLLGGYNNSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQSRHPHSHSQHHQHQVAQGSPLHLPASSAVAAHHYSSSSVPGSELSPDGHAVAEDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLVGSSAGGMTSEKLTTAGNCSPAPAGSEHHYSVRYHSNHSHKIQVVPQLLQDIMDVEHLWHYNDNDRVSGSGGVLGSARNNIGDSMLFGGSGSGLTPSGIGTATGIGAGNNGGAVECLSNDSSNVDTNSKKGETASPASSTSTGASDQHSTNGNTTNNSNSQIASNSNGNSAQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTDNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01267641;
90% Identity
iTF_00885153;
80% Identity
iTF_01407465;