Basic Information

Insect: Temnothorax longispinosus
Gene Symbol: Hr39
Assembly: GCA_004794745.1
Location: QBLH01002112.1:1086863-1111837[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 2 1.3e+04 -5.7 6.4 136 164 11 39 4 74 0.60

2 4 2 1.3e+04 -17.6 23.0 134 164 335 365 197 509 0.58

3 4 3.6e-08 0.00023 20.2 0.0 1 21 576 596 576 609 0.93

4 4 7.4e-71 4.8e-67 226.7 0.3 201 408 755 969 608 969 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	2	1.3e+04	-5.7	6.4	136	164	11	39	4	74	0.60
2	4	2	1.3e+04	-17.6	23.0	134	164	335	365	197	509	0.58
3	4	3.6e-08	0.00023	20.2	0.0	1	21	576	596	576	609	0.93
4	4	7.4e-71	4.8e-67	226.7	0.3	201	408	755	969	608	969	0.84

Sequence Information

Coding Sequence: atgtgtataagagacagctcgtCGACTCCCACTTCGGCGGCAGGTTCCGCATCCGTTTCTGTCTCCTGCTCCGCGTCCAGCTCATCCTCGACGAGCTCTTCCACCTCGGCCAACTCGTCCGCGACTTGTTGCCCCTCGTCCTGCATCGGCGTGTCCTGCACGATGAGCCCAAGCCGCTCCACGGAAACGGGGAAAAACGTGTCCGTCACCACTATTAACGTACCGCCCAATCAAGAAATGCACGATGGTAAAGGAGTATGTAAATATCTCGGGGGGCAGAATGGCGTGACGGTGTCGGTGGTATCGACCTCGGTACTGGGATGCGGAAACGCGAACGCCATCCCGACAAGCGGAATCTGCACGAATACGGGGCCGCATAGTATCGGTATCGGAATCGGCGGCATCCTCGCCGCGAACGCGGCCGACATCGATGATCCCGAGGACAGCGACGGCGAGATCAGCAAGATCGACTTTAGAGGCGTCAATCTACGTTCGAAGAAGAAACGCGACGTATCGGGTAATCAGAATGGCGACAAAATCGGTGACGGAGATGCAAACGGCGACGGCGGGGGATGTTGCGATGACAATTCGCAACAGCAGCCAGAGAGGCCTATGTCATGGGAGGGTGAACTATCGGACCAAGAAATGTCTTCCAATACAATTACTAATCAGGATCACAATGAGGAAACGTCTATGGAGGGGGTTCAAGTATGCAGCACGAGCCCTGGGCCCATGGAACAGAAATTTCCTATCAAGTCGGAACCGGATTTTCGATCCAGCCCAGGTTTTACAATAGGATCCTTTCACGATGGTGGACTGCCCATGACACACAATCAACAActgcagcaacagcaacagcaacaacgcGGTATTGAAAACCTCGAACAGACGCAACAGAGCGACCTACCGCTTCTCGTAGGCAAGCTTCTCGGTGGATACAACAACTCGACGCCTAATCACAGTCCTGTTCTAAATCCGCGACATCATCTAACTAAACACAGTCATACTAGATCGCAGGTGCCGTCACCAGATTCCGCCATTCATTCCGCGTATAGTGTCTTCAGTTCACCAACACAGAGCCCCCACGCGGCACGGCATTCCGCCCTAGGAGCGGGCAGTCCGATACCCTCCTCGTCGCTGTCCCTCTCTCGACACAGCTTTAACAATTCGACCTCCTCGTTATCCTTATCGCTGTCGCATTCGCTTTCGAGGAACAATTCCGACGCTTCCAGTAGCTGCTACAGCTACGGTTCGCTTAGCCCGCCTACGCATTCACCCGTCCAGCAGTCGAGACATCCGCATTCGCACTCGCAACATCATCAGCATCAAGTGGCGCAAGGTAGTCCGCTGCATCTACCAGTCTCGTCCGCAGTCGCCGCACATCATTACTCGTCCTCTTCCGTACCAGGCTCGGAACTATCGCCGGACGGCCATGCTGTCGCGGAGGATCAGGAAGACTGTAGGATACCCTCAGCGCCGTCGGGTATCTCCACAAGGCAACAACTGATCAACAGCCCCTGCCCGATTTGCGGCGACAAGATAAGCGGCTTCCATTACGGCATTTTCTCGTGTGAATCGTGCAAGGGATTCTTCAAGCGCACCGTCCAGAATCGCAAGAACTATGTGTGCCTTAGAGGCGCAGGCTGTCCGGTCACCGTGGCTACGAGGAAGAAGTGCCCGGCCTGCCGCTTCGACAAGTGCCTCAACATGGGTATGAAACTCGAGGCGATCAGGGAGGATCGTACCAGAGGCGGTAGAAGCACTTATCAATGTACCTACACTCTACCGGCAAATCTCGTTGGTAGTCCTGCCGGCGGTATGACCAGTGAAAAACTGACGACGGCGGGCAATTGCAGCCCGGCACCGGCCGGTAGCGAGCACCATTATTCCGTTAGATACCATTCAAATCATTCTCACAAGATACAAGTAGTACCTCAACTTTTGCAAGACATCATGGATGTGGAACATCTTTGGCATTATAACGACAACGATCGGGTAAGCGGCAGTGGAGGGGTACTTGGAAGTGCAAGGAATAACATTGGTGACAGTATGCTGTTCGGTGGATCCGGAAGTGGTCTGACGCCCAGCGGTATTGGAACCGCGACCGGTATTGGCGCCGGAAACAACGGAGGTGCGGTGGAATGTTTGTCGAATGACTCTAGTAACGTCGATACTAACAGTAAGAAAGGAGAGACGGCGAGCCCTGCCAGTTCGACCTCAACGGGGGCGTCTGATCAACATTCCACAAATGGCAATACCACCAACAATAGTAATTCTCAAATCGCCAGTAATTCCAATGGCAATTCAGCGCAGCATCCGGACTTTCTATCTAATCTGTGCAACATCGCGGATCATCGGCTTTATAAGATCGTCAAGTGGTGCAAGAGTCTgccattatttaaaaatatctcgatcGACGATCAAATCTGTTTGTTGATCAACTCTTGGTGCGAGCTACTACTTTTCTCCTGCTGTTTTCGCAGCATGAGCACTCCCGGTGAGATAAGAGTGTCTCTTGGCAAGTCGATTACTCTAGAACAAGCAAGACAGCTTGGTTTAGCGACTTGCATCGAGAGGATGCTCGCTTTTACCGACAATCTGCGAAGACTGAGAGTAGACCAATACGAATATGTTGCAATGAAGGTGATCGTGCTGTTAACATCCGATACAAGCGAATTAAAGGAGCCTGAGAAAGTCAGAGCCTCTCAGGAAAAGGCCCTTCAAGCACTGCAGCAATATACAATCGCGAGGTATCCAGAAATGCCTGCCAAATTCGGTGAACTATTGTTGAGAATTCCAGATCTACAAAGAACATGTCAAGCAGGAAAAGAATTGCTCAGTGCAAAACGCGCCGAGGGAGAAGGCAGCTCGTTTAACCTTTTAATGGAATTGTTGAGAGGAGATCACTGA
Protein Sequence: MCIRDSSSTPTSAAGSASVSVSCSASSSSSTSSSTSANSSATCCPSSCIGVSCTMSPSRSTETGKNVSVTTINVPPNQEMHDGKGVCKYLGGQNGVTVSVVSTSVLGCGNANAIPTSGICTNTGPHSIGIGIGGILAANAADIDDPEDSDGEISKIDFRGVNLRSKKKRDVSGNQNGDKIGDGDANGDGGGCCDDNSQQQPERPMSWEGELSDQEMSSNTITNQDHNEETSMEGVQVCSTSPGPMEQKFPIKSEPDFRSSPGFTIGSFHDGGLPMTHNQQLQQQQQQQRGIENLEQTQQSDLPLLVGKLLGGYNNSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQSRHPHSHSQHHQHQVAQGSPLHLPVSSAVAAHHYSSSSVPGSELSPDGHAVAEDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLVGSPAGGMTSEKLTTAGNCSPAPAGSEHHYSVRYHSNHSHKIQVVPQLLQDIMDVEHLWHYNDNDRVSGSGGVLGSARNNIGDSMLFGGSGSGLTPSGIGTATGIGAGNNGGAVECLSNDSSNVDTNSKKGETASPASSTSTGASDQHSTNGNTTNNSNSQIASNSNGNSAQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTDNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01267641;
90% Identity: iTF_00885153;
80% Identity: iTF_01406538;