Tlon001287.1
Basic Information
- Insect
- Temnothorax longispinosus
- Gene Symbol
- JARID2
- Assembly
- GCA_004794745.1
- Location
- QBLH01001544.1:17437-38455[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.7 3.7e+03 -2.1 0.2 55 83 155 185 136 186 0.65 2 3 1.5 3.3e+03 -1.9 0.0 38 65 1127 1153 1121 1164 0.82 3 3 4.3e-23 9.3e-20 70.4 0.0 6 89 1383 1464 1379 1464 0.94
Sequence Information
- Coding Sequence
- ATGGTTTTGAGTCGCAACgacaagagaaagaggaaggaggGAGACTTGGTGGACCTTATGGAGCCACTTTCAGAATCTTCGAAAAGGACCAAAGTTCATGCACAAAGAAAATTTGCACAAGGTGCAACCACAGTGTTCAATACTTCGCCTACATCTGTCAAGGACAAGGAAAAAGCTAAACCTACCACAATCACAGAATTAATAACTCACAAACGTCCAAATACGGAggattttttaacatttttatgctttagagGAACATCTATTTTGCCACCCAgtttaaatttcttcaatatcggcaacaaaaaagagaaacaggaGCCCAAGCCAGCTCGAACTTCTACAGAGAAGGCTTCTTCTACTAGTACTTTTACAGATATTCAGAAGCAAGAAAGTACATGCCagaaaaatgtgataaaagaaaatacatgcCAGAAAAAAGTAAAGCCTATTGTTTCAAATAAGAAAACGGTGGCTAGTACATTACAAAAAAGCATTACCAAGCTTAAGACAGCTACGTCTACTGTCCAagcgcttaaaaaaaaatatcaggaGCAACGCCTTGctaaacaaagaataaaaaataaattcaaaaccACTTGCGTTATGAGGACAAGATCGTGTACAGAAAGATCTATGTTGAAGGCTGGTCTTCAGTTGGCGCCGCGAAAATTCTTACCTAGAATCAAGGCGAAGAGACATGGCCTAAGAAGTGGTGTTGTACTGCCAGATAAAATCAACAAACCTCTGTCAAAAACGAAAGTTGCGTTACCCAGACCAAAGAAGAAAGTCGATGTTAAACCGAAAAATAGCGATACGTCGAACACAGATGTGTCATCCGAAGAAGAGAACGATGTCGAGGACGatgaagagaaagaattaCATGTGGAGAAATCGACATTGCAGATAAAGCGCAACATTCAAAaaggcataaaaaaaaaaatctgcacCAGAAGTAAGTCAGAGATGAGGAGAGTTACAAGATCATCCAGTAGCACGGTCTCCTCACAGAATCTCTCCAGAAGGCCTACCAGAAAAACGAAGGAAGCAGCTGCTGTATATATGGAAATTCTTGGAAGGAAATTAGTGAGCCCGGATTTAGAAAATGATGATAACGTTTCAGTTGAGAGCTTTCCCGAACTGCCAAATGCTCGTAGAATAGCGCAAACGGAAAACGAGCTTAAAGCCAAAGTGAAACAGAATAGTACCAAGACTATCGCTAAAACTAAAGATTCTAAAGTTAGCTCTCTCAATAGTAACACTAATAAGCGATTGGATAAGAGCAAAAACAACAAGTTGATTTTAAAGAGCAAACGTCTGATGAGGGTACAGAGATATTGCGAAGAGGATAGTGACGAAGAATCTGAGAGTTCAATAGAAACGAACAATACAAGACCCATTACCAGACAAAGTCTTGGAAAGATTGATAAACCGATTAGCAGGAGTCTTAGATCATCCTCTAAAAACACAACTATACAAACAGAAATACAAAGTAACACAAATACCAAACCGAAGACCCAGGTTCAAAGTTGTATGAAATCAGCTAGAGAAAAATTCGTGATAAAACGTAAACGCGAGCAAAATGTATCTAAAACATCGTCGGATAAGATTAAGCAAAAAAGCCTTAAAAGTAATCAAAACGAGAAAGCGGAATCCGAAGAGGAAACTTTGGGAATGCTgctcaataaaataaagaagaagaaagaaaatgacgAGGAAGAAGGACAGATCCCTGACAATGTTGATAATACGAAAGATGGAAAGGCAGCTCGCGGAAATAGGCAAAATGTGAAAGCAGATATGTCGAAGGTATCGGACGACGAGGAATCTTTTCGTGGGTTTACTAAGAAGGCGATATCGAAAGTATTGAATTCATGTCAAACGCATGCCAATGTTAATCTGCTAGTCAGAGAGTCCGATGAAAAGCTGAATTTCTCCAAAACTTTGGACGTATCGCAAACAATGGATAAAAGCGATACTTTATGGGAAAGTAAAGTAGAAACATCATCAGTCAAAGCTGGTTCTCTGGTCGCAAATTCACTGAACGGCGAGTGCAACGTATCTGTGCAGGATCAAAAATCGGTATTGGATTTGTCTGTAAAGACACAAAGCTCGTTGTTGCCATCCATGGAACAGACGAAATGTAACCACGAAAACGAGGTTTCTTCCAATCTTATGCCACTATCTACTCTGCATACGAGAAAGGAACGAGTGAATATGTCGACTGAACAGATAGAAAAGTGGCTAAACGAAAGCTCGCTTGCCAAAGAAGAGAGCAAATTGGAGATGGAAAATGTCTCCAGCTTTAGGTGCAATTCTGCGAAAGAAAAGTTAAAGACGGACGTCTCGCATCTGTCTATCTCGACGAAAATTCAACATTTAGTACGCCCGGTTAACGTCACTCTTTCGAAATTATCAGATAAGACGAATTTGAAGGACCGTGCGGGGATACACGGCAGAAATATNACGCGACATGAGAACAGCTGCTGCTTCCTGGACCGTGCGGGGATACACGGCAGAAATATGATATCAGCATCATCTGATATGCGTAATACTGGAGTGAAGCAACAAAATGCGATTGTCGACAAGAGTAAGATTATTACCGAAACGAGAGAGATTGTCAAGAATAAAACTGAGAAGACGTACAAAGATACTTCTTTTGCTGAAGATACTAGCGATACTGTGTCCAAATCGGATCAAAACTCGGTGGATGGTTCTATAGAGAAGAAATCACCGGcggagaagaaaatatttcaactgcGGAAGCCCTTTTTGCCTAAGGTCAAGGAACGTAAGACTGTAACACCGAATGCGAACGCCTTTTCGCCAGAGAACGAGAGCAGCGTTTATGCGTTTGAAAGCGATACTGAGGTTCCTGTTAGCACACCCTTCCGAAGAAAGGTCAGAGATGATGCAAAACGTTCGACTGCAGTAATGCAGTCCACAGCGGTTATAGTATCCGAGACCAAAGTGATTGCCGAAGCTAAGAAATTGAGTTTGAAGGAGGATTCTGAATCGTCAGATAGCAAAGAAAAATCGTCGAATGATTCCGCGATGCTCATGAGGAAAGAAGATGGAAAGGAGACACAAGGACCGATAAACGTGGTAAATACGGGTCCAAGCGTGAGCAAGTTTGAGCTGCCCAAGAATTTCGCGAGCTTGACCAGTGTCCAAGTGCTACCACTCGACAAACTCACGACGAGTTGGAGCAACGTAAATTGCAGCGCTTCTATAGCAGTGCAAGTGAATCTCGACGAAACCACGCAGGAGCAAGAAAGCGATGCGAGTCAACAAAAAAGTACCGAGATATCCACTCAGACCGAAATGAGTAACGAGAATGACGATGACAACGACGGGCAGCTGTTTTACATTCCGTTGCAGGCTGTTACGAGGGGCGGCCCGAATCTGGTACAAGGTCAACAGCTAATACAAGGCGTCGCTGTTAAACTTGGCACGGAAGGACCGACCGGTCCTAATCAAAGAGTGCTCCTTCGGGCTAAGCTGGTCACTAAACCACCGTTATCCGTGGCCCGTTGTCCACCGATAGGAACGGTACAACCGACAACACGTACCCCGTCCAATCCTACGACGATTACGGTGGAACAGCACATACCATCGACGTCAACGACTGAGACTGTGTCGACCATGATAGCAAGTATGAGTGCAAAGACGCAACCGATATCACTAACGAAAAATGAAGTCTCGATACCAAGTCCGAATCGTCCAAATGCCAGTACGAGCGCAAATAGCAGTTTGGAGAAACTTATAAAGTCACCAAAGTCATCTAGGGAAAGAAAAGCTTCTATAGATTCGACAAAAAGCGGGAAGAGGACACAAATGAAATGCAAACAAAAAGGATTGGAGCTATGCTCTTCAAGCAGCAGTACATTTCCAGGCACTAAGATCGCGAACGATGAAGCTCGTGTAGTCGAGGCACCAACGTTTTATCCGACGGAGAAAGATTTCCAGGATCCATTGGAGTATATAGACAAGATAAGGCCAATCGCTGAAAAATTTGGAATATGTAGAGTGGTGCCTCCACCAAATTTCAAgccGGAATGCAAAGTGTCCGACGATATGAGATTTACCGCTTATAATCAATATGTACATCGGATGCTCCACAGATGGGGTCCTAATGTGAAAGAAATGATGGctatcaagaaatatttagctACTCAGAGTATTACTTTGACTCAACCTCCATGgATTGGTGGGATGGAAGTAGATTTACCTCACTTATATCAAACAGTTCAAAGCTTAGGTGGATTGAAAgaagttattgaaaaaaagaaatggcaGAAAGTAGCAGATGGCATGAAGATACCAAAATCGGCACAGGATCGTGTTACTAAATTAGacgatatttattgtaaatatttactacCATATGATACACTATCGCcagaGGAACGTGAGAAATTGTTCGACGAAGTTGAAACTGAATGGATGAGAAAAGAAAGCAAAGCCTTGCAAAGGCAAGAAGTGTCGTCCAATGATAACGATGAGGAAGAGGATGAGGACAGTTCTGATGAAATTGAAGAATGCATCGTAAAAGGAAGAAACATGCCGTTGAACGCTTTTTACCGAATTGCCCGTAATACGCAACGTATGTGGTTTGGTGAAAATCAACGAGGAAACGAAACTGAGGGTGCTTCCGCCAATGAGGTGGAGAGTGCATTTTGGAAACACGTTGCCGAGAGAAAACGTCATGTTTGTGTACATGCGGCAAGCATTGATTCCAGTGGTCGTGGATTTGGCTTTTCCGTTGCAAAAAACAGTCCGTTCGCTAGACATCCTTGGAATCTTAAAGTTCTCACTAACAATGCTGGATCAGTATTGAGAGCTTTGGGTCCACTAATGGGTGTGACCGTACCGACATTGCATGTGGGTATGTTATTTAGCGCTTGTTGCTGGTATCGCGATCCACACGGTTTACCATGGATAGAGTATCTACATACAGGTGCCAAAAAGATTTGGTATGGGATACCCGATGAgcataataacaattttcgaAAAGCACTTTCGAAAATGGTACCGCGATATTGCAAAAACAAGACTATTTGGTTACCTTCTGACACTGCCATGGTTCCACCAGAATTATTAGTAAGCAACGGTGTACCGTTATGTCAGATAGTACAAGAACCGGgacaatttataatagtatttCCAAAAGCGTTCACATCTAGCATTTGTACCGGTTATGTAGTATCCGAAAGCGTATATTTCGCACAACCATCTTGGTTAGAAACCGCGGAACAAGTATTTAAGGACATACAAGACAGTTGCGAACCTTCTATCTTTTCATTCGaaagattgttatttaatattattaatgacacAAGATCTcacatagatatattaaaacagATATTGCCGAGTGTGATAAAGATTCGCGAAAAGGAATTAGATTATCGTAAACAACTGGAATGTGTGGGTCTTATCAATAGAGAAAGATTGCCTTTGCCAGATAgtggaaaaggaaagaaagggaaaaaggTGAAAGAAGATGATGGTGACTTTGAATGTGAGACGTGTAGAGCCAATTTGTTTGTCTCTTTGGTAAACAATTCACAAGATGACAGCGTTTATTGTTTGCCGCATGCATTGCATTTAATCAGTTGTAAGAAgcaaattctgaaatattgtACTCTGATGTACACATATGACGAAGACGAATTAGACGAATTGATTCACAAACTGGAAAACAGGATCGAAGCCAAATCTAAAAAAACtaatcaaataaaacaaaataagcaAGAAAGATAA
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMEPLSESSKRTKVHAQRKFAQGATTVFNTSPTSVKDKEKAKPTTITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNIGNKKEKQEPKPARTSTEKASSTSTFTDIQKQESTCQKNVIKENTCQKKVKPIVSNKKTVASTLQKSITKLKTATSTVQALKKKYQEQRLAKQRIKNKFKTTCVMRTRSCTERSMLKAGLQLAPRKFLPRIKAKRHGLRSGVVLPDKINKPLSKTKVALPRPKKKVDVKPKNSDTSNTDVSSEEENDVEDDEEKELHVEKSTLQIKRNIQKGIKKKICTRSKSEMRRVTRSSSSTVSSQNLSRRPTRKTKEAAAVYMEILGRKLVSPDLENDDNVSVESFPELPNARRIAQTENELKAKVKQNSTKTIAKTKDSKVSSLNSNTNKRLDKSKNNKLILKSKRLMRVQRYCEEDSDEESESSIETNNTRPITRQSLGKIDKPISRSLRSSSKNTTIQTEIQSNTNTKPKTQVQSCMKSAREKFVIKRKREQNVSKTSSDKIKQKSLKSNQNEKAESEEETLGMLLNKIKKKKENDEEEGQIPDNVDNTKDGKAARGNRQNVKADMSKVSDDEESFRGFTKKAISKVLNSCQTHANVNLLVRESDEKLNFSKTLDVSQTMDKSDTLWESKVETSSVKAGSLVANSLNGECNVSVQDQKSVLDLSVKTQSSLLPSMEQTKCNHENEVSSNLMPLSTLHTRKERVNMSTEQIEKWLNESSLAKEESKLEMENVSSFRCNSAKEKLKTDVSHLSISTKIQHLVRPVNVTLSKLSDKTNLKDRAGIHGRNXTRHENSCCFLDRAGIHGRNMISASSDMRNTGVKQQNAIVDKSKIITETREIVKNKTEKTYKDTSFAEDTSDTVSKSDQNSVDGSIEKKSPAEKKIFQLRKPFLPKVKERKTVTPNANAFSPENESSVYAFESDTEVPVSTPFRRKVRDDAKRSTAVMQSTAVIVSETKVIAEAKKLSLKEDSESSDSKEKSSNDSAMLMRKEDGKETQGPINVVNTGPSVSKFELPKNFASLTSVQVLPLDKLTTSWSNVNCSASIAVQVNLDETTQEQESDASQQKSTEISTQTEMSNENDDDNDGQLFYIPLQAVTRGGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKPPLSVARCPPIGTVQPTTRTPSNPTTITVEQHIPSTSTTETVSTMIASMSAKTQPISLTKNEVSIPSPNRPNASTSANSSLEKLIKSPKSSRERKASIDSTKSGKRTQMKCKQKGLELCSSSSSTFPGTKIANDEARVVEAPTFYPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEEREKLFDEVETEWMRKESKALQRQEVSSNDNDEEEDEDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRGNETEGASANEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFRKALSKMVPRYCKNKTIWLPSDTAMVPPELLVSNGVPLCQIVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDTRSHIDILKQILPSVIKIREKELDYRKQLECVGLINRERLPLPDSGKGKKGKKVKEDDGDFECETCRANLFVSLVNNSQDDSVYCLPHALHLISCKKQILKYCTLMYTYDEDELDELIHKLENRIEAKSKKTNQIKQNKQER
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01423428;
- 90% Identity
- iTF_01405473; iTF_01407950; iTF_01407013;
- 80% Identity
- -