Tnyl033091.1
Basic Information
- Insect
- Temnothorax nylanderi
- Gene Symbol
- JARID2
- Assembly
- GCA_030848795.1
- Location
- JASTWM010000835.1:1-8671[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.6 1.1e+04 -1.8 0.2 55 83 155 185 136 186 0.65 2 3 2.2 8.9e+03 -1.5 0.0 38 65 1107 1133 1101 1145 0.81 3 3 6.4e-23 2.6e-19 70.7 0.0 6 89 1363 1444 1359 1444 0.94
Sequence Information
- Coding Sequence
- ATGGTTTTGAGTCGCAACGacaagagaaagaggaaggagGGTGACTTGGTGGACCTCATGGAGCCACTTTCAGAATCTTCGAAAAGGACCAAAGTTCATGCACAAAGAAAATTTGCACAAGGTGCAACCACAGTGTTCAATACTTCGCCTACATCTGTCAAGGACAAGGAAAAAGCTAAACCTACCACAATCACAGAATTAATAACTCACAAACGTCCAAATACGGAggattttttaacatttttatgctTTAGAgGAACATCTATTTTGCCACCCAGTTTAAATTTCTTCAATATTGGCaacaaaaaagagaaacagGAGCCCAAGCCCGCTCGAACTTCTACAGAGAAGGCTTCTTCTACTAGTACTTTTACAGATATTCAGAAGCAAGAAAGTACATGCCAGAAAAAtgtgataaaagaaaatacatgCCAGAAAAAAGTAAAGCCTATTGTTTCAAATAAGAAAACGGTGGCTAGTACATTACAAAAAAGCATTACCAAGCTTAAGACAGCTACGTCTACTGTCCAAgcgcttaaaaaaaaatatcaggaGCAACGCCTTGCTAAACAAagaatcaaaaataaattcaaaaccACTTGCGTTATGAGGACAAGATCGTGTACAGAAAGATCTATGTTGAAGGCTGGTCTTCAGTTGGCGCCGCGAAAATTCTTACCTAGAATCAAGGCGAAGAGACATGGCCTAAGAAGTGGTGTTGTACTGCAAGATAAAATCAACAAACCTCTGTCAAAAACGAAAGTTGCGTTACCCAGACCAAAGAAGAAAGTCGATTTTAAACCGAAATATAGCGATACATCGAATACAGATGTGTCATCCGAAGAAGAGAACGATGTCGAGGACGATGAAGAGAAAGAATTACATGTGGAGAAATCGACATTGCAGATAAAGCGCAACATTCAAAaaggcataaaaaaaaaaatctgcacCAGAAGTAAGTCAGAAATGAGGAGAGTTACAAGATCATCAAGTAGCACGGTCTCCTCACAGAATCTCTCCAGAAGGCCTACCAGAAAAACGAAGGAAGCAGCCGCTGTATATATGGAAATTCTTGGAAGGAAATTAGTGAGCCCGGATTTAGAAAATGACGATAACGTTTCAGTTGAGAGCTTTCCCGAACTGCCAAATGCTCGTAGAATAGCGCAAACGGAGAACGAGCTTAAAGCCAAAGTGAAACAGAATAGTACCAAGACTATCGCTAAAACTAAAGATTCTAAAGTTAGCTCTCTCAATAGTAACACTAATAAGCGATTGGATAAGAGCAAAAACAACAAGTTGATTTTAAAGAGCAAACGTCTAATGAGGGTACAGAGATATTGCGAAGAGGATAGTGACGAAGAATCTGAGAGTTCAATAGAAACGAACAATACAAGACCCATTACCAGACAAAGTCTTGGAAAGATTGATAAACCGATTAGCAGGAGTCTTAGATCATCCTCTAAAAACACAACTATACAAACAGAAATACAAAGTAACACAAATACCAAACCGAAGACCCAGGTTCAAAGTTGTATGAAATCAGCTAGAGAAAAATTCGTGATAAAACGTAAACGCGAGCAAAATGTATCTAAAACATCGTCGGATAAGATTAAGCAAAAAAGCCTTAAAAGTAATCAAAACGAGAAAGCGGAATCCGAAGAGGAAACTTTGGGAATGCTgctcaataaaataaagaagaagaaagaaaatgacGAGGAAGAAGGACAGATCCCTGACAATGTTGATAATACGAAAGATGGAAAGGCAGCTCGCGGAAACAGGCAAAATGTGAAAGCAGATCTGTCGAAGGTATCGGACGACGAGGAATCTTTTCGTGGGTTTACTAAGAAGGCGATATCGAAAGTATTGAATTCATGTCAAACGCATGCCAATGTTAATCTGCTAGTCAGGGAGTCCGATGAAAAGCTGAATTTATCCAAAACTTTGGACGTATCGCAAACAATGGATAAAAGCGATACTTTATGGGAAAGTAAAGTAGAAACATCATCAGTCAAAGCTGGTTCTCTGGTCGCAAATTCACTGAACGGCGAGTGCAATGTATCTGTGCAGGATCAAAAATCGGTATTGGATTTGTCTGTAAAGACACAAAGCTCGTTGTTGCCATCCATGGAACAGACGAAATGTAACCACGAAAACGAGGTTTCTTCCAATCTTATGCCACTATCTACTCTGCATACGAGAAAGGAACGAGTGAATATGTCGACTGAACAGATAGAAAAGTGGCTAAACGAAAGCTCGCTCGCCAAAGAAGAGAGCAAATTGGAGATGGAAAATGTCTCCAGCTTTAGGTGCAGTTCTGCGAAAGAAAAGTTAAAGACAGACGTCTCGCATCTGTCTATCTCGACGAAAATTCAACATTTAGTACGCCCGGTTAACGTCACTCTTTCGAAATTATCAGATAAGACGAATTTGAAGGACCGTGCGGGGATACACGGCAGAAATATGATATCGGCATCATCTGATATGCATAATACTGGAGTGAAGCAACAAAATGCGATTGTCGACAAGAGTAAGATTATTACCGAAACGAGAGAGATTGCCAAGAATAAAACTGAGAAGACGAACAAAGATACTTCTTTTGCTGAAGATACTAGCGATACTGTGTCTAAATCAGATCAAAACTCGGTGGATGGTTCTATAGAGAAGAAATCACTGACggagaagaaaatatttcaactgCGGAAGCCCTTTTTGCCTAAGGTCAAGGAACGTAAGACTGTAACACCGAATGCGAACGCCTTTTCGCCAGAGAACGAGAGCAGCGTTTATGCGTTTGAAAGCGATACTGAGGTTCCTGTTAGCACACCCTTCCGAAGAAAGGTCAGAGATGATGCGAAACGTTTGAATGCAGTAATGCAGTCTACAGCGGTTATAGTATCCGAGACCAAAGTGATTGCCGAAGCCAAGAAATCGAGTTTGAAGGAGGATTCTGAATCGTCAGATAGCAAAGAAAAATCGTCGAACGATTCCGCGATGCTCATGAGGAAAGAAGATGGAAAGGAGACACAAGGACCGATAAACGTGGTAAATACGGGTCCAAGCGTGAGCAAGTTTGAGCTGCCCAAGAATTTCGCGAGCTTGACCAGTGTCCAAGTGCTACCACTCGACAAACTCACGACGAGTTGGAGCAACGTAAATTGCAGCGCTTCCATAGCAGTGCAGGTGAATCTCGACGAAACCACGCAGGAGCAAGAAAGCGATGCGAGTCAACAAAAAAGTACCGAGATATCCACTCAGACCGAAATGAGTAACGAGaatgacgacgacaacgacgggCAGCTGTTTTACATTCCGTTGCAGGCTGTTACGAGGGGCGGCCCGAATCTGGTACAAGGTCAACAGCTAATACAAGGCGTCGCTGTTAAACTTGGCACGGAAGGACCGACCGGTCCTAATCAAAGAGTGCTCCTTCGGGCTAAGCTGGTCACTAAACCACCGTTATCCGTGGCCCGTTGTCCACCGATAGGAACGGTACAACCGACAACACGTACCCCGTCCAATCCTACGACGATTACGGTGGAACAGCAAGTACCATCGACGTCAACGACTGAGACTGTGTCGACCACGATAGCAAGTATGAGTGCGAAGACGCAACCGATATCACTAACGAAAAATGAAGTCTCGATACCAAGTCCGAATCGTCCAAATGCCAGTACGAGCGCAAATAGCAGTTTGGAGAAACTTATAAAGTCACCAAAGTCATCTAGGGAAAGAAAAGCTTCTATAGATTCGACAAAAAGCGGGAAGAGGACACAAATGAAATGCAAACAAAAAGGATCGGAGCTATGCTCTTCAAGCAACAGTACATTTCCAGGCACGAAGATCGCGAACGATGAAGCTCGTGTAGTCGAGGCACCAACGTTTTATCCGACGGAGAAAGATTTCCAGGATCCATTGGAGTATATAGACAAGATAAGGCCAATCGCtgaaaaatttggaatatgtAGAGTGGTGCCTCCACCAAATTTCAAGccGGAATGCAAGGTGTCCGACGATATGAGATTTACCGCTTATAATCAATATGTACATCGCATGCTCCACAGATGGGGTCCTAATGTGAAAGAAATGATGgctatcaagaaatatttagctACTCAGAGTATTACTTTGACTCAACCTCCATGgATTGGTGGGATGGAAGTAGATTTACCTCACTTATATCAAACAGTTCAAAGCTTAGGTGGATTGAAAGaagttattgaaaaaaagaaatggcAGAAAGTAGCAGATGGCATGAAGATACCAAAATCGGCACAGGATCGTGTTACTAAATTAGAcgatatttattgtaaatatttactacCATATGATACACTATCGCCagaGGAACGTGAGAAATTGTTCGACGAAGTTGAAACTGAATGGATGAGAAAAGAAAGCAAAGCCTTACAAAGGCAAGAAGTGTCGTCCAATGATAACGATGAGGAAGAGGATGAGGACAGTTCTGATGAAATTGAAGAATGCATCGTAAAAgGAAGAAACATGCCGTTGAACGCTTTTTACCGAATTGCCCGTAATACGCAACGTATGTGGTTTGGTGAAAATCAACGAGGAAACGAAACCGAGGGTGCTTCCGCCAATGAGGTGGAGAGTGCATTTTGGAAACACGTTGCCGAGAGAAAACGTCATGTTTGTGTACATGCGGCAAGCATTGATTCCAGTGGTCGTGGATTTGGCTTTTCCGTTGCAAAAAACAGTCCGTTCGCTAGACATCCTTGGAATCTTAAAGTTCTCACTAACAATGCAGGATCAGTATTGAGAGCTTTGGGTCCACTAATGG
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMEPLSESSKRTKVHAQRKFAQGATTVFNTSPTSVKDKEKAKPTTITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNIGNKKEKQEPKPARTSTEKASSTSTFTDIQKQESTCQKNVIKENTCQKKVKPIVSNKKTVASTLQKSITKLKTATSTVQALKKKYQEQRLAKQRIKNKFKTTCVMRTRSCTERSMLKAGLQLAPRKFLPRIKAKRHGLRSGVVLQDKINKPLSKTKVALPRPKKKVDFKPKYSDTSNTDVSSEEENDVEDDEEKELHVEKSTLQIKRNIQKGIKKKICTRSKSEMRRVTRSSSSTVSSQNLSRRPTRKTKEAAAVYMEILGRKLVSPDLENDDNVSVESFPELPNARRIAQTENELKAKVKQNSTKTIAKTKDSKVSSLNSNTNKRLDKSKNNKLILKSKRLMRVQRYCEEDSDEESESSIETNNTRPITRQSLGKIDKPISRSLRSSSKNTTIQTEIQSNTNTKPKTQVQSCMKSAREKFVIKRKREQNVSKTSSDKIKQKSLKSNQNEKAESEEETLGMLLNKIKKKKENDEEEGQIPDNVDNTKDGKAARGNRQNVKADLSKVSDDEESFRGFTKKAISKVLNSCQTHANVNLLVRESDEKLNLSKTLDVSQTMDKSDTLWESKVETSSVKAGSLVANSLNGECNVSVQDQKSVLDLSVKTQSSLLPSMEQTKCNHENEVSSNLMPLSTLHTRKERVNMSTEQIEKWLNESSLAKEESKLEMENVSSFRCSSAKEKLKTDVSHLSISTKIQHLVRPVNVTLSKLSDKTNLKDRAGIHGRNMISASSDMHNTGVKQQNAIVDKSKIITETREIAKNKTEKTNKDTSFAEDTSDTVSKSDQNSVDGSIEKKSLTEKKIFQLRKPFLPKVKERKTVTPNANAFSPENESSVYAFESDTEVPVSTPFRRKVRDDAKRLNAVMQSTAVIVSETKVIAEAKKSSLKEDSESSDSKEKSSNDSAMLMRKEDGKETQGPINVVNTGPSVSKFELPKNFASLTSVQVLPLDKLTTSWSNVNCSASIAVQVNLDETTQEQESDASQQKSTEISTQTEMSNENDDDNDGQLFYIPLQAVTRGGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKPPLSVARCPPIGTVQPTTRTPSNPTTITVEQQVPSTSTTETVSTTIASMSAKTQPISLTKNEVSIPSPNRPNASTSANSSLEKLIKSPKSSRERKASIDSTKSGKRTQMKCKQKGSELCSSSNSTFPGTKIANDEARVVEAPTFYPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEEREKLFDEVETEWMRKESKALQRQEVSSNDNDEEEDEDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRGNETEGASANEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVLTNNAGSVLRALGPLM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01423428;
- 90% Identity
- iTF_01406288;
- 80% Identity
- -