Tame026306.1
Basic Information
- Insect
- Temnothorax americanus
- Gene Symbol
- JARID2
- Assembly
- GCA_030770215.1
- Location
- JASTWO010000488.1:10317-21699[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9 9.7e+03 -1.8 0.0 38 65 1029 1055 1023 1066 0.82 2 2 8e-23 2.7e-19 70.5 0.0 6 89 1285 1366 1281 1366 0.94
Sequence Information
- Coding Sequence
- ATGGTTTTGAGTCGCAACGacaagagaaagaggaaggaggGAGACTTGGTGGACCTCATGGAGCCACTTTCAGAATCTTCGAAAAGGACCAAAGTTCATGCACAAAGAAAATTTGCACAAGGTGCAACCACAGTGTTCAATACTTCGCCTACATCTGTTAAGGACAAGGAAAAAGCTAAACCTACCACAATCACAGAATTAATAACTCACAAACGTCCAAATACGGAggattttttaacatttttatgctTTAGAgGAACATCTATTTTGCCACCCAGTTTAAATTTCTTCAATATCGGcaacaaaaaagagaaacaggaGCCCAAGCCAGCTCGAACTTCTATAGAGAAGGCTTCTTCTACTAgtacttttacatatattcAGAAGCAAGAAAAAAGATCTATGTTGAAGGCTGGTCTTCAGTTGGCGCCGCGAAAATTCTTACCTAGAATCAAGGCGAAGAGACATGGCCTAAGAAGTGGTGTTGTACTGCTAAATAAAATCAACAAACCTCTGTCAAAAACGAAAGTTGCGTTACTTAGACCAAAGAAGAAAGTCGATGTTAAACCGAAAAATAGCGATACATCGAATACAGATGTGTCATCCGAAGAAGAGAACGATGTCGAGGACGATGAAGAGAAAGAATTACATGTAGAGAAATCGACATTGCAGATAAAGCGCAATGTtcaaaaaggaataaaaaaaaaaatctgcacCAGAAGTAAGTCAGAGATGAGGAGAGTTACAAGATCATCCAGTAGCACGGTCTCCTCACAGAATCTCTCCAGAAGGCCTACCAGAAAAACGAAGGAAGCAGCTGCTGTATATATGGAAATTCTTGGAAGGAAATTAGTGAGCCCGGATTTAGAAAATGACGATAACGTTTCAGTTGAGAGCTTTCCCGAACTGCCAAATGCTCGTAGAATAGCGCAAACGGAGAACGAGCTTAAAGCCAAAGTAAAACAGAATAGTACCAAGACTATCGCTAAAACTAAAGATTCTAAAGTTAGCTCTCTCAATAGTAACACTAATAAGCGATTGGATAAGAGCAAAAACAACAAGTTGATTTTAAAGAGCAAACGTCTGATGAGGGTACAGAAATATTGCGAAGAGGATAGTGACGAAGAATCTGAGAGTTCAATAGAAATGAACAATACAAGACCCATTACCAGACAAAGTCTTGGAAAGATTGATAAACCGATTAGCAGGAGTCTTAGATCATCCTCTAAAAACACAACTATACAAACAGAAATACAAAGTAACACAAATACCAAACCGAAGACCCAGGTTCAAAGTTGTATGAAATCAGCTAGAGAAAAATTCGTGATAAAACGTAAACGCGAGCAAAATGTATCTAAAACATCGTCGGATAAGATTAAGCAAAAAAGCCTTAAAAGTAATCAAAACGAGAAAGCGGAATCCGAAGAGGAAACGTTGGGAATGCTgctcaataaaataaagaagaagaaagaaaatgacGAGGAAGAAGGACAGATCCCTGACAATGTTGATAATACGAAAGATGGAAAGGCAGCTCGCGGAAACAGGCAAAATGTGAAAGCAGATCTGTCGAAAGTATCGGACGACGAGGAATCTTTTCGTGGGTTTACTAAGAAGGCGATATCGAAAGTCTTGAATTCATGTCAAACGCATGCCAATGTTAATCTACTAGTCAGAGAGTCCGATGAAAAGCTGAATTTGCCTAAAACTTTGGACGTATCGCAAACAATGGATAAAAGCGATACTTTATGGGAAAGTAAAGTAGAAACATCATCAGTCAAAGCTGGTTCTCTGGTCGCAAATTCACTGAACGGCGAGTGCAACGTATCTGTGCAGGATCAAAAATCGGTATTGGATTTGTCTGTAAAGACACAAAGCTCGTTGTTGCCATCCATGGAACAGACGAAATGTAACCACGAAAACGAGGTTTCTTCCAATCTTATGCCCCTATCTACTCTGCATACGAGAAAGGAACGAGTGAATATGTCGACTGAACAGATAGAAAAGTGGCTAAACGAAAGCTCGCTTGCCAAAGAAGAGAGCAAATTGGAGATGGAAAATGTCTCCAGCTTTAGGTGCAATTCTGCGAAAGAAAAGTTTAAGACGGACGTCTCGCATCTGTCTATCTCGACGAAAATTCAACATTTAGTACGCCCGGTTAACGTCACTCTTTCGAAATTATCAGATAAAACGAATTTGAAGGACCGTGCGGGGATATACGGCAGAAATATGATATCAGCATCATCTGATATGCATAATACTGGAGTGAAGCAACAAAATGCGATTGTCGACAAGAGTAAGATTATTACCGAAACGAGAGAGATTGCCAAGAATAAAACTGAGAAGACGAACAAAGATACTTTTTTTGCTGAAGATACTAGCGATACTGTGTCCAAATCGGATCAAAACTCGGTGGATGGTTCTATAGAGAAGAAATCACCGACggagaagaaaatatttcaactgCGGAAGCCCTTTTTGCCTAAGGTCAAGGAACGTAAGACTGTAACACCGAATGCGAACGCCTTTTCGCCAGAGAACGAGAGCAGCGTTTATGCGTTTGAAAGCGATACTGAGGTTCCTGTTAGCACACCCTTCCGAAGAAAGGTCAGAGATGATGCAAAACGTTCGACTGCAGTAATGCAGTCCACAGCGGTTATAGTATCCGAGACCAAAGTGGTTGCCGAAGCCAAGAAATCGAGTTTGAAGGAGGATTCTGAATCGTCAGATAGTAAAGAAAAATCGTTGAACGATTCCGCGATGCTTATAAGGAAAGAAGATGGAAAGGAGACACAAGAACCGATAAACGTGGTAAATACGGGTCCAAGCGTGAGCAAGTTTGAGCTGCCCAAGAATTTCGCGAGCTTGACCAGTGTCCAAGTGCTACCACTCGACAAACTCACGACGAGTTGGAGCAACGTAAATTGCAGCGCTTCCATAGCAGTGCAGGTGAATCTCGACGAAACCACGCAGGAGCAAGAAAGCGATGCGAGTCAACAAAAAAGTACCGAGATATCCACTCAGACCGAAATGAGTAACGAGAATGACGATGACAACGACGGGCAGCTGTTTTACATTCCGTTGCAGGCTGTTACGAGGGGCGGCCCGAATCTGGTACAAGGTCAACAGCTAATACAAGGCGTCGCTGTTAAACTTGGCACGGAAGGACCGACCGGTCCTAATCAAAGAGTGCTCCTTCGGGCTAAGCTGGTCACTAAACCACCGTTATCCGTGGCCCGTTGTCCACCGATAGGAACGGTACAACCGACAACACGTACCCCGTCCAATCCTACGACGATTACGGTGGAACAGCACATACCATCGACGTCAACGACTGAGACTGTGTCGACCACGATAGCAAGTATGAGTGCGAAGACGCAACCGATATCAATAACGAAAAATGAAGTCTCGATACTAAGTCCGAATCGTCCAAATGCCAGTACGAGCACAAATAGCAGTTTGGAGAAACTTATAAAGTCACCAAAGTCATCTAGGGAAAGAAAAGCTTCTATAGATTCGGCAAAAAGCGGGAAGAGGACACAAATGAAATGCAAACAAAAAGGATCGGAGTTATGCTCTTCAAGCAACAGTACATTTCCAGGCACGAAGATCGCGAACGATGAAGCTCGTGTAGTCGAGGCACCAACGTTTTATCCGACGGAGAAAGATTTCCAGGATCCATTGGAGTATATAGACAAGATAAGGCCAATCGCTGAGAAATTTGGAATATGTAGAGTGGTGCCTCCACCAAATTTCAAGcCGGAATGCAAGGTGTCCGACGATATGAGATTTACCGCTTATAATCAATATGTACATCGCATGCTCCACAGATGGGGTCCTAATGTGAAAGAAATGATGGctatcaagaaatatttagctACTCAGAGTATTACTTTGACTCAACCTCCATGgATTGGTGGGATGGAAGTAGATTTACCTCACTTATATCAAACAGTTCAAAGCTTAGGTGGATTGAAAGaagttattgaaaaaaagaaatggcaGAAAGTAGCAGATGGCATGAAGATACCAAAATCGGCACAGGATCGTGTTACTAAATTAGacgatatttattgtaaatatttactaCCATATGATACACTATCGCcagaGGAACGTGAGAAATTGTTCGACGAAGTTGAAACTGAATGGATGAGAAAAGAAAGCAAAGCCTTGCAAAGGCAAGAAGTGTCGTCCAATGATAACGATGAGGAAGAGGATGAGGACAGTTCTGATGAAATTGAAGAATGCATCGTAAAAGGAAGAAACATGCCGTTGAACGCTTTTTACCGAATTGCCCGTAATACGCAACGTATGTGGTTTGGTGAAAATCAACGAGGAAACGAAACCGAGGGTGCTTCCGCCAATGAGGTGGAGAGTGCATTTTGGAAACACGTTGCCGAGAGAAAACGTCATGTTTGTGTACATGCGGCAAGCATTGATTCCAGTGGTCGTGGATTTGGCTTTTCCGTTGCAAAAAACAGTCCATTCGCTAGACATTCTTGGAATCTTAAAGTTCTCACTAACAATGCTGGATCAGTATTGAGAGCTTTGGGTCCACTAATGGGTGTGACCGTACCAACATTGCATGTGGGTATGTTATTTAGCGCTTGTTGCTGGTATCGCGATCCACATGGTTTACCATGGATAGAGTATCTACATACAGGTGCCAAAAAGATTTGGTATGGGATACCCGATGAgcataataacaattttcgaAAAGCACTTTCGAAAATGGTACCGCGATATTGCAAAAACAAGACTATATGGTTACCTTCTGACACTGCCATGGTTCCACCAGAATTATTAGTAAGCAACGGTGTACCGTTATGTCAGATAGTACAAGAACCGGGACAATTTATAATAGTATTTCCAAAAGCGTTCACATCTAGCATTTGTACCGGTTATGTAGTATCCGAAAGCGTATATTTCGCACAACCATCTTGGTTAGAAACCGCGGAACAAGTATTTAAGGACATACAAGACAGTTGCGAACCTTCTATCTTTTCATTTGAAagattgttatttaatattattaatgacacAAGATCTCacatagatatattaaaacagATATTGCCGAGTGTGataaaaattcgcgaaaaggAATTAGATTATCGTAAACAACTGGAATGTGTGGGTCTTATCAATAGAGAAAGATTGCCTTTGCCAGATAGtggaaaaggaaagaaagggaaaaagGTGAAAGAAGATGTTGGTGACTTTGAATGTGAGACGTGTAGAGCAAATTTGTTTGTCTCTTTGGTAAACAATCCACAAGATGACAGCGTTTATTGTTTGCCGCATGCATTGCATTTAATCAGTTGTAAGAAGCAAGTTCTGAAATATTGTACTCTGATGTACACATATGACGAATTTTCCACCACCTAA
- Protein Sequence
- MVLSRNDKRKRKEGDLVDLMEPLSESSKRTKVHAQRKFAQGATTVFNTSPTSVKDKEKAKPTTITELITHKRPNTEDFLTFLCFRGTSILPPSLNFFNIGNKKEKQEPKPARTSIEKASSTSTFTYIQKQEKRSMLKAGLQLAPRKFLPRIKAKRHGLRSGVVLLNKINKPLSKTKVALLRPKKKVDVKPKNSDTSNTDVSSEEENDVEDDEEKELHVEKSTLQIKRNVQKGIKKKICTRSKSEMRRVTRSSSSTVSSQNLSRRPTRKTKEAAAVYMEILGRKLVSPDLENDDNVSVESFPELPNARRIAQTENELKAKVKQNSTKTIAKTKDSKVSSLNSNTNKRLDKSKNNKLILKSKRLMRVQKYCEEDSDEESESSIEMNNTRPITRQSLGKIDKPISRSLRSSSKNTTIQTEIQSNTNTKPKTQVQSCMKSAREKFVIKRKREQNVSKTSSDKIKQKSLKSNQNEKAESEEETLGMLLNKIKKKKENDEEEGQIPDNVDNTKDGKAARGNRQNVKADLSKVSDDEESFRGFTKKAISKVLNSCQTHANVNLLVRESDEKLNLPKTLDVSQTMDKSDTLWESKVETSSVKAGSLVANSLNGECNVSVQDQKSVLDLSVKTQSSLLPSMEQTKCNHENEVSSNLMPLSTLHTRKERVNMSTEQIEKWLNESSLAKEESKLEMENVSSFRCNSAKEKFKTDVSHLSISTKIQHLVRPVNVTLSKLSDKTNLKDRAGIYGRNMISASSDMHNTGVKQQNAIVDKSKIITETREIAKNKTEKTNKDTFFAEDTSDTVSKSDQNSVDGSIEKKSPTEKKIFQLRKPFLPKVKERKTVTPNANAFSPENESSVYAFESDTEVPVSTPFRRKVRDDAKRSTAVMQSTAVIVSETKVVAEAKKSSLKEDSESSDSKEKSLNDSAMLIRKEDGKETQEPINVVNTGPSVSKFELPKNFASLTSVQVLPLDKLTTSWSNVNCSASIAVQVNLDETTQEQESDASQQKSTEISTQTEMSNENDDDNDGQLFYIPLQAVTRGGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKPPLSVARCPPIGTVQPTTRTPSNPTTITVEQHIPSTSTTETVSTTIASMSAKTQPISITKNEVSILSPNRPNASTSTNSSLEKLIKSPKSSRERKASIDSAKSGKRTQMKCKQKGSELCSSSNSTFPGTKIANDEARVVEAPTFYPTEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTQPPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEEREKLFDEVETEWMRKESKALQRQEVSSNDNDEEEDEDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRGNETEGASANEVESAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHSWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFRKALSKMVPRYCKNKTIWLPSDTAMVPPELLVSNGVPLCQIVQEPGQFIIVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDTRSHIDILKQILPSVIKIREKELDYRKQLECVGLINRERLPLPDSGKGKKGKKVKEDVGDFECETCRANLFVSLVNNPQDDSVYCLPHALHLISCKKQVLKYCTLMYTYDEFSTT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01423428;
- 90% Identity
- iTF_01406288;
- 80% Identity
- -