Tame001212.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Temnothorax americanus
Gene Symbol
Hr39
Assembly
GCA_030770215.1
Location
JASTWO010000010.1:1022271-1026485[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 1.5 3e+04 -4.9 8.2 128 164 34 71 20 95 0.60
2 5 2 4e+04 -5.3 8.9 83 163 308 396 229 431 0.59
3 5 2 4.1e+04 -11.7 14.6 70 160 416 499 369 541 0.42
4 5 4e-08 0.0008 20.1 0.0 1 21 608 628 608 634 0.92
5 5 7.4e-71 1.5e-66 226.7 0.2 201 408 787 1001 641 1001 0.84

Sequence Information

Coding Sequence
ATGTCAGAGCAAAACGGGCCCAGCGAGGGCCCAGGGCCAGGGCCCGGCTCGGATTCGGGCTGGTGGCCAAACACGCAGTCTTGGAAATCGTCGGCGGCCGCCTCGTCGTCGACCTCGTCGACTCCCACTTCGGCGGCAGGTTCCGCATCCGTTTCTGTCTCGTGCTCCGCGTCCAGCTCATCCTCGACGAGCTCTTCCACCTCGGCCAACTCGTCCGCGACTTGTTGCCCCTCGTCCTGCATCGGCGTGTCCTGCACGATGAGCCCAAGCCGCTCCACGGAAACGGGGAAAAACGTGTCCGTCACCACTATTAACGTACCGCCCAATCAAGAAATGCACGATGGTAAAGGAGTATGTAAATATCTCGGGGGGCAGAATGGCGTGACGGTGTCGGTGGTATCGACCTCGGTACTGGGATGCGGAAACGCGAACGCCATCCCGACAAGCGGAATCTGCACGAATACGGGGCCGCATAGTATCGGTATCGGAATCGGCGGCATCCTCGCCGCGAACGCGGCCGACATCGATGATCCCGAGGACAGCGACGGCGAGATCAGCAAGATCGACTTTAGAGGTGTCAATCTACGTTCGAAGAAGAAACGCGACGTATCGGGTAATCAGAATGGCGACAAAATCGGTGACGGAGATGCAAACGGCGACGGCGGGGGATGTTGCGATGACAATTCGCAACAGCAGCCAGAGAGGCCTATGTCATGGGAGGGTGAACTATCGGACCAAGAAATGTCTTCCAATACAATTACTAATCAGGATCACAATGAGGAAACGTCTATGGAGGGGGTTCAAGTATGCAGCACGAGCCCTGGGCCCATGGAACAGAAATTTCCTATCAAGTCGGAACCGGATTTTCGATCCAGCCCAGGTTTCACAATAGGATCCTTTCACGATGGTGGACTGCCCATGACACACAATCAACAActgcagcaacagcaacagcaacaacgCGGTATCGAAAACCTCGAACAGACGCAACAGAGTGACCTACCGCTTCTCGTAGGCAAGCTTCTCGGTGGATACAACAACTCGACGCCTAATCACAGTCCTGTTCTCAATCCGCGACATCATCTAACTAAACACAGTCATACTAGATCGCAGGTGCCGTCACCAGATTCCGCCATTCATTCAGCGTATAGTGTCTTCAGTTCACCAACACAGAGCCCCCACGCGGCACGGCATTCCGCCCTAGGAGCGGGCAGTCCGATACCCTCCTCGTCGCTGTCCCTCTCTCGACACAGCTTCAACAATTCGACCTCCTCGTTATCCTTATCGCTGTCGCATTCGCTTTCGAGGAACAATTCCGACGCTTCCAGTAGCTGCTACAGCTACGGTTCGCTTAGCCCGCCTACGCATTCACCCGTCCAGCAGTCGAGACATCCGCATTCGCACTCGCAACATCATCAGCACCAAGTGGCGCAAGGTAGTCCGCTGCATCTACCAGTCTCGTCCGCAGTCGCCGCACATCATTACTCGTCCTCTTCCGTACCAGGCTCGGAACTATCGCCGGACGGCCATGCTGTCGCGGAGGATCAGGAAGACTGTAGGATACCCTCAGCGCCGTCGGGTATCTCCACGAGGCAACAACTGATCAACAGCCCCTGCCCGATTTGCGGCGACAAGATAAGCGGCTTCCATTACGGCATCTTCTCGTGTGAATCGTGCAAGGGATTCTTCAAGCGCACCGTCCAGAATCGCAAGAACTATGTGTGCCTTAGAGGCGCAGGCTGTCCGGTCACCGTGGCTACGAGGAAGAAGTGCCCGGCCTGCCGCTTCGACAAGTGCCTCAACATGGGTATGAAACTCGAGGCGATCAGGGAGGATCGTACCAGAGGCGGTAGAAGCACTTATCAATGTACCTACACTCTACCGGCAAATCTCGTTGGTAGTCCTGCCGGCGGTATGACCAGTGAAAAACTGACGACGGCGGGCAATTGCAGCCCGGCACCGACCGGTAGCGAGCACCATTATTCCGTTAGATACCATTCAAATCATTCTCACAAGATACAAGTAGTACCTCAACTTTTGCAAGACATCATGGATGTGGAACATCTTTGGCATTATAACGACAACGATCGTGTAAGCGGCAGTGGAGGAGTACTTGGAAGCGCAAGAAATAATATTGGTGACAGTATGCTGTTCGGTGGATCCGGAAGTGGTCTGACGCCCAGCGGTATTGGAACCGCGACCGGTATTGGCGCCGGAAACAACGGAGGTGCGGTGGAATGTTTGTCGAATGACTCTAGTAACGTCGATACTAACAGTAAGAAAGGAGAGACGGCGAGCCCTGCCAGTTCGACCTCAACGGGGGCGTCTGATCAACATTCCACAAATGGCAATACCACCAACAATAGTAATTCTCAAATCGCCAGTAATTCCAATGGCAATTCAGCGCAGCATCCGGACTTTCTATCTAATCTGTGCAACATCGCGGATCATCGGCTTTATAAGATAGTCAAGTGGTGCAAGAGTCTgccattatttaaaaatatctcgatCGACGATCAAATCTGTTTGTTGATCAACTCTTGGTGCGAGCTACTACTTTTCTCCTGCTGTTTTCGCAGCATGAGCACTCCCGGTGAGATAAGAGTGTCTCTTGGCAAGTCGATTACTCTAGAACAAGCAAGACAGCTTGGTTTAGCGACTTGCATCGAGAGGATGCTCGCTTTTACCGACAATCTGCGAAGACTGAGAGTAGACCAATACGAATATGTTGCAATGAAGGTGATCGTGCTGTTAACATCCGATACAAGCGAATTAAAGGAGCCTGAAAAAGTCAGAGCCTCTCAGGAAAAGGCCCTTCAAGCACTGCAGCAATATACAATCGCGAGGTATCCAGAAATGCCTGCCAAATTCGGTGAACTATTGTTGAGAATTCCAGATCTACAAAGAACATGTCAAGCAGGAAAAGAATTGCTCAGTGCAAAACGCGCCGAGGGAGAAGGCAGCTCGTTTAACCTTTTAATGGAATTGTTGAGAGGAGATCACTGA
Protein Sequence
MSEQNGPSEGPGPGPGSDSGWWPNTQSWKSSAAASSSTSSTPTSAAGSASVSVSCSASSSSSTSSSTSANSSATCCPSSCIGVSCTMSPSRSTETGKNVSVTTINVPPNQEMHDGKGVCKYLGGQNGVTVSVVSTSVLGCGNANAIPTSGICTNTGPHSIGIGIGGILAANAADIDDPEDSDGEISKIDFRGVNLRSKKKRDVSGNQNGDKIGDGDANGDGGGCCDDNSQQQPERPMSWEGELSDQEMSSNTITNQDHNEETSMEGVQVCSTSPGPMEQKFPIKSEPDFRSSPGFTIGSFHDGGLPMTHNQQLQQQQQQQRGIENLEQTQQSDLPLLVGKLLGGYNNSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQSRHPHSHSQHHQHQVAQGSPLHLPVSSAVAAHHYSSSSVPGSELSPDGHAVAEDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLVGSPAGGMTSEKLTTAGNCSPAPTGSEHHYSVRYHSNHSHKIQVVPQLLQDIMDVEHLWHYNDNDRVSGSGGVLGSARNNIGDSMLFGGSGSGLTPSGIGTATGIGAGNNGGAVECLSNDSSNVDTNSKKGETASPASSTSTGASDQHSTNGNTTNNSNSQIASNSNGNSAQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTDNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01267641;
90% Identity
iTF_00885153;
80% Identity
iTF_01405856;