Thag067222.1
Basic Information
- Insect
- Tanypteryx hageni
- Gene Symbol
- -
- Assembly
- GCA_028673005.1
- Location
- CM054115.1:98763419-98766446[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.3e-11 2e-07 33.3 0.0 2 39 74 112 73 116 0.91 2 4 8.7e-10 7.8e-06 28.2 0.0 1 38 131 168 131 174 0.89 3 4 4.5e-16 4e-12 48.3 0.0 3 44 188 229 186 230 0.95 4 4 1.6e-18 1.4e-14 56.2 0.0 1 40 237 277 237 281 0.92
Sequence Information
- Coding Sequence
- ATGAGACGAGATAGGGTCAGCCCAGTGTGGGCCCCCTTGCCCTCTGGGCCCCACCCACTTGCGTATGGCAGTGAGGTATCTGGGGCCCccggaggaggcggaggaggaggtggaggaggcagCGGCatcggaggaggagggggtggcggaggaggaggcggcggtgGTGGAGGAGGCGGTGGTGGCAAGTGTGGCCCTGGAGGCCCTAAGAACTGGAACCATGAAGATATGGAGATGGCCCTTGATGCTCTGCGCTCCCACGCCATGAGTCTCACACGAGCATCTGCCACGTTTGGAATCCCGTCCACCACTCTCTGGCAACGAGCTCATCGTCTTGGCATCGACACTCCAAAGAAGGATGGTGGTGGTCCACCAGGTGGGAAGTCTTGGTCAGAGGATGACTTGACGACTGCCCTTGATGAACTTCGAGCTGGTCGCATCTCGGCTAATCGTGCAGCCAAGGTGTATCGTATACCAAGCAGCACGTTATATAAAATTGCAAGAAAAGAAGGGATCAAACTCTCTGCCCCCTTTAATGCCACTCCCACAACTTGGTCATCCGAAGATCTTAACCGAGCCCTAGAAGCAATCCGTCAGGGCACATCAGTACAGAGGGCATCATCAGAGCACGGCATACCTAGTGGCACACTTTATGGGAGGTGCAAGAGAGAGGGCATCGAACTCTCTAAGAGCAACCCAGTTCCATGGTCCGAGGATGATATGAATGAGGCGCTTGAAGCAGTACGGGTGGGTGAGATGAGCATCAACCAAGCTGCAATCCATTACAACCTTCCATATTCCTCCCTCTACGGGCGATTCAAAAGGATTCGCTttgaggccgaaggaggaggagTCGAGGGAGGCTCGGCTCAAGGTCCTGCAGGTCCCGGCAGTGGCAGTGGGATCATGCTCACCACCAGTGGAGGAGGACACGAGGGCATCGACTTCGAGATGTACAGCAGCTGA
- Protein Sequence
- MRRDRVSPVWAPLPSGPHPLAYGSEVSGAPGGGGGGGGGGSGIGGGGGGGGGGGGGGGGGGGKCGPGGPKNWNHEDMEMALDALRSHAMSLTRASATFGIPSTTLWQRAHRLGIDTPKKDGGGPPGGKSWSEDDLTTALDELRAGRISANRAAKVYRIPSSTLYKIARKEGIKLSAPFNATPTTWSSEDLNRALEAIRQGTSVQRASSEHGIPSGTLYGRCKREGIELSKSNPVPWSEDDMNEALEAVRVGEMSINQAAIHYNLPYSSLYGRFKRIRFEAEGGGVEGGSAQGPAGPGSGSGIMLTTSGGGHEGIDFEMYSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01212600;
- 90% Identity
- iTF_01504595;
- 80% Identity
- -