Thag053501.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tanypteryx hageni
Gene Symbol
ARID2
Assembly
GCA_028673005.1
Location
CM054114.1:128421091-128455703[-]

Transcription Factor Domain

TF Family
RFX
Domain
RFX domain
PFAM
PF02257
TF Group
Basic Domians group
Description
RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer [1]. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD) [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.2e-18 3.9e-13 52.5 0.0 2 78 147 226 146 227 0.94
2 2 2 1.3e+05 -3.8 1.2 13 50 1623 1660 1619 1662 0.79

Sequence Information

Coding Sequence
ATGCCGAATGTAAATGCCTCTGTTCCTCACACTCCTTCCACTACCCTGGCCACATTGTCTCCTGTGGTGGCATCTAGTGTACCTTTCCGTCCATCCCCTGTCATTCAGAGGCATCCACAGGTGCCTCAAAgaacTCTAATAGGAGCACCTCAGCCTGCAGTTGCCACCCCTGTCAACCTCTCTGCTGCTCAGCAGCAGTTGGGTTCTTCAATGGTTACGTCAACAGGAACAATGAGTGCCACTGCTCCGTTGACTACACCATCTCACATGACTGGTGCACATCATCAGCATTCCCAACTGGTACATCATCATCAGCAGCAGCTGCATCAAAATCAGCCAAATCAACATCAGATGCTCCATCATCAGGGAGTGGTTGTGGGAACTACGCCGAGCAGCATTCACCAGCAGCACCAGCAGCAAATGGCACAGGAAAATGAGCAGTTTGCCCTTGCATGGATTCGAGCAACTTATGACCAAGCTAATGGGTCTAGCATCGAGCAGGCTGACTTGTATCGGCAGTATTTAGCTTCTTGTGCCAAGATAGGCCGACGTGGTGTTGTCTCAGCCTTGCAATTTCCACGATGTGTTAGGTCTGTCTTTGGAACTGCCGTCGGACCAGTCCAGCGAATGTCTCCCAGTGGCTCAACGGAGTATCATTACGAGGGTATCAAGGTGCGAGCGAATGCCCTGTCCCGCTTTGCGTCTGCAGGGGTGGTGCACACTATGCCCAACCTTGCAGCCCCTTCCCCCCATACAAACCCCTCCCAAATGCACCAAGCACAGCCTCAACAACACCTCAGGAAGCAAGTCCCCCCGATCCAGCACCACCAACTCCAACAGCAGCTTCACCACAGGCCAGACAGCACGGCCTCCCCTCCCCTAGTGTCTTCCCCGACGCCCTCGTGCTCACCTACCCCAAGTGTTGCCCCCTGCTCACCAATACTCAAGGCTCAGTTGAGTGCCCCACCCAAAGCATCCAAAGGGGAGAGTAAGAGCCAGGTGTTGGCTCATCCGCACCTCACGCAGGCCCTGCTTGGCAGCACAACAGGACCCAGaaactcccctcctcctcccatccaaCACCCACAGGCGTCATCATCATCCTCTCCTACTGTCACGTCATCCATTTCCTCGTCTGTTGCGGTCCCTCAGCCTCCATCTTCTCCCACGGCCCCTCCTGTTTCCCCATCCCCTTCAACCTCggcctccccttcctcttcttccatggGAACCCACACAGCTTCATCAAGCAGCGGGAGTTGtacttcctcttcttccctcatcAAGAGTCTGCTAGCATCCAAGGTAAACACGGGGCCCCCAGATGGGACCCCGTCCGTCGGGTCAATGCCTGACAGCCGACAACTGCAGCAGCAGAGGAACCCGACGCAGTGCATGAGTGGCATGACAGTGCCTTCCCCCCATGTTACTACCACCCCTATCCAATCCCATGCCCAAAGTCCACTGGTGACACCACCAACCGTCTCCAACGAAACGCCGTTGTCCCCAGAGAGCAATCAGGTAGCACAACGGCAACAGCAGCAAAGACTCCTCATGCAGCTTCAGCAGCAACAAACTAGTGCAACAAGTAGTACCACCACATCATCTACTACTGCAGTTGCAAATCCCATCAGTCCAAGGCCATCAACACCATCTTCGGTGACCAATGTGACAAGCACCACTAGTTCCACAATGACTGCGCAGCTTGCTCAGCCGCAAAAAATCCAACAAACACTCAGCCCTGTCACCAACAAAGCAGGCACTGTTGTTGGCACTGTCTTGACCACAGGAGTCATTAGTAAGATGAATGAGCCTACATCTCCACGTCCGAGAATTTCAAGGATCAATGGGGCCAGGGTTATATCAATGGAGaTTGATGGGAAAGAAGTTTGGGATGCCACTGCAACACCATTGTCTCCTCAAGGACCTTGGGGTGCTGATAAAGCAGATAGCAATCATTTATCAAATTCACCTCTGCGAGGTCGTCGGGATCCACCTCAGCCACCCCCACCATTGACGCCACATTCTTTGACTCCAAGTCCTCAACCAATATCAACAAACCTCCCTCCACCACTGGTTTCCATTGGAGGTGTTCGAAGCCCTGTTTGTGCTCCTCCACCAAGGCCAGATGAAGACTCGAACTCGGCTGCATCTTCTTCTACTGTGTCAAGTGGTGTGACTGGAGGTGGCAATGCTACTTTGCAGACCACACCTCTTCCTGTTCCCTCTAATACTCCTAGTGCATCAGATGGTGATGAAAACTCTCTGACCAGTTTTGAGGGATTGCTTCTCAATGGTGGTACAGTTGTACCTCACTCCTTAGACATTGATGGTAATAGTAGCATTGGTGGTGGATTGGCATCTAATGATGATGACAGTTCTTCTAAGGACTCTGCCAGAAGTGGACTTAGCAGGCTTCCTAATAGTAATCCTGGGAGTGGAGCCACAAAAGTGAAGGGAATGCTTGCAGATCTTCTGGAAAAGAAAGTGGGGCCCAGGGAGCCTCTGATTAATGGCGTACTGGGAAAAGAACTTAGAATTGGTGAAAAAGGTTTAGAATTGGTTGAAAATCATGAGACAGTTGAGCAAAATAACAATCCTGAAGGTGGCAATAATGATACAAATCAGGTGATGTCATCTGGAAATCTTAACCCTGTAAATCCATCCTCGGGAGTGGTTTCTTCTGAAACTGTTGTGACATCAGGGACTGTTACAACTACAACTACTACTACTGGAAGTCTTCCTCCAGGGGCAATTCCTGGTGGAGTTGTGGTTGGTAGAGTTGTAATTGCTGGAGGCACACCTAACACTGTGTCAATGAGTGATGTAACCTCTCAGCAGCCTCCCCCATTAAGGACAGTGGTTATTTCTGCTGGCAATAGTAGTGGTGTTGTGGTCAGACCAGGTGATGGTATACTAGGTGGTATTGGTGGGGCCAATAATTCCAGTGATGCAAAGGTTCAAGTTGTAGGCTTGCTGGGGACCAATGCAGGTGGAGTGAGTGGCCAACCAGGAGCCATTCAGACTTTTCGAATTGCTGGTGGATTAGAAGAGTTATTAGCAGGTTCTCAAGTATCGGTGGAACAATTGAAGCAAATAATACAGCAGCAACAATTGCAACAACAGCAGTTACAGCAGCAACAACTGCAGCAGCAGCAGTTACAgcaacaacaacagcagcagTTGCAACAGCAACAGCAGTTACAGCAgcaacaacagcagcagcaacaacagcagcagcaacaacaacaacagcagcagcagcaacaacaacagCAACAATTACAGCAGCAGCAACTGCCACAACAGCAGCTGATTTCTCAACAACAACAGGCACTAAAAAGACCTGCTCCTCCTTTAGCTCGGGAAGTCCAACCTGAAATTAAAAGAGTTCATTTGGCTAATGTTCCAAATGGTAATAGTACCCCACCATTAATACCTATTGTAGGCAAGGATCAACAAGTAGGAATACCAGTAGCCTACACAAATCAAGCAGCAAATGCAACAGTGGCTACCAGCATTGCAGGAGGTGCTATCCAGTACAGTGTTCAATCACAGGAAAATATGACGGTTGCATCCAATCATCAGCAACAGCAATCACAGCAACCTCAAATCATCATGAAGCAGATAGATGGAACGGTAGCTGTCTCAAGTCAAGCAACCATGGTACAAAGTCCTGCACTTGCAGCACAACAGGTGCGACAGGTTTTAGTATCACAGGGTCAGGGTGGAGAGCAGCAGTTGATAGCTGTGGCACCCCGGCAGATAGTCCTTGCGGCTCCTCCTGGGagcattgctggtggaactgtcATCTCTCAAGGGACGCAGACTGCAGTGCCACAGCATCATCAAATGGTTGCAATCCAACAGAAGGCAGGGACCGCTGGAATGTTGGTAGCTACTTCAGCTGGAGGCCAACGTCAACTGGTACCTGGTCAAGTAATGATCTCGCAAGGTGGAGGGGCGCAAGTACTTGTCTCACATGCCCAAATGACATCTCAAGGTCCAGTGTTTGTCACCACTCAGCCTCCAAATACAGCAGGAACACAGCAGTATTTGGTTGCGTCTAGTAGTGGCAGTGTTAGTGGTGGTGCAGCAGGTGGAGTGAACTATGTGGTTGCTCAACCTCAGACTGCTCTTGTTCAAGGACAGACACAGACAGTTCTTGTAGCTCAGACTCCTCAGCAGCAAGGCACAAGTGCAAAAACAATAATAATCCTCCAATCCCAAGGACAGAAAATGATGATGGCAACTGGAGGGAGTGGAGGACAACAAGTTGTGATGCAAGTTCCTCGTGCTAGTGGTGCAAGCATCATTCAGGCAGCCAGCGGAGGACCTGTTACATCTCAGGCTTGTGTGCAGGTTGCAGTATCTGCTGCGCAAGCTGTAATGGGTGGCGGGCAAGGAGGTTCAGTTACTGTCGCCGTACCCGTAGCCACAGCAGCTAGAGCTCAAATAGTAGGCAATCATGGCCTTATTGGTCAGCCCCAAGTACAGATTCCACAGCAAATTCAAGTTCAGCAGCAACAAATCCAACCACAGGCACAGGTGCAGCAGCCTCAGCAGGTTCAACAAACACAGCAAGTACAGAATCCCCAAGTACAAGTCCAGCAGCAGGTGCAAGTACAGAGTCAGCAAGTACAATTGCAGCAACAAATGCAGGTACAGAGTCAGCAAGTACAAGTCCAGCACGTTGAGGTACAAACCCAACAGGATCAACAATCCCCTCAACAAACGCAGCAGCAAACACAAACTCAGTCACAGCAACAAGCTCAACAGCAGCAGATACAGCAAATTCAGTTACAACAGCAGCTGCAACAGCAGCAGTTGCAAGTACAACCTCAGTTGCCacaacagcagcagcaacagTTACAACAGCAGCAGCAAGTGCAACAGCAACATTTGCAACAACAGCATCAGCAGTTGCAGCAGCAGCTGCAACAGCAACAGCTGCAGCAACAACAAACCCAGCAAATCATACAGCATCATCCTGTCCCACAACCTATTCAACAACAGGAGCAACCACAGTTGGTTTTGCAGCATCAACAAATTCAGCTTCAGCCATCAGTGACCCCAACTCCTGCACTTTCACCTGCTCCATCTTCCTCCACTCCAACACCTTGTGCATCACCAGCACCATCTGTCATAACCATGGCAATGAGTTCTCAGTCGAAAGGACAGCAAGTAACAGTTTCCACCTCTCCTAAGCCCAACCTCTCCCCAAATGTCAAAGGTGCATCAGCAATGTGCAGTGTTGGTCTTGCAAGTGGCACCGCTGTCGGGAAGGGAATGCCTTCCCCCTCAGTTGGTATGCCATCTCGACCGTCAACCCCCAGAGCGGGGCAACAAGGACATGATGTTGACCATTCTCCTCAGCAACATCAGTCTGTCATTTCAAGCACTAATAGGGTGAATTCTAGCCCTAGTCCCCACAGGGAGTTGCACTATGGTCAGTTCCTCTGTGAATGGAGAGGCTGCATGAGGAGTTTTAAGTCTGCCAATGAGGTCTACATGCATGCATGCCGTGAGCACTGTCCAACAGCTGCCAATGAGGAGCAGCAGTGTCTGTGGGAGCGCTGTGATGGAATGAGGAGGAAGCGATTTTCTCTGATGACTCATCTTTTTGACCGTCATTGTAATGCTGAGGTATGTATGAAGCATTTTCCTGACTTTCGGAAtctcaatcttgccctaaaaAAAACCATTACctatcaatctctctccctcctctgtcctaaaaaaccattatctatctgtccctcctctctccccccttccctctccctctctctcccccctctctctctccccccctctctctctctcccccctctctctcccccctctctctccccctctctctccccctccctctctctccctccctctctccccctacctctctccccctacctctctccccctccctctctcccccctctctctccccctcccccctctctctccccctcccccctctctctccccctcccccctctctctctccctctctctccccctcccccctctctccccctcccccctctctccccctcccccctctctcccctccccctctctccccctccccctctctccccctccccctctctctccctctctctctccccctccctctccccctctctctccccctcccccctctctctccccctcccccctctctctccccctcccccctctctctccccctcccccctctctctccccctcccccctctctctccccctcccccctctctccccctccccccctctctctcccccctcccccctctctctccccctcccccctctctctccccctccctctctctcccctccccccctctctctctcccctccccccctctctctctcccctccctctctctctctctccctccctctctctctcccccctccctctctctccccctctcttcctctctccccctctcttcctcttttttgcAACTGAAAGCTCTCCATTACTATAAGAATTCTGTTGTTGTGCCTCATGCACTTTTATAA
Protein Sequence
MPNVNASVPHTPSTTLATLSPVVASSVPFRPSPVIQRHPQVPQRTLIGAPQPAVATPVNLSAAQQQLGSSMVTSTGTMSATAPLTTPSHMTGAHHQHSQLVHHHQQQLHQNQPNQHQMLHHQGVVVGTTPSSIHQQHQQQMAQENEQFALAWIRATYDQANGSSIEQADLYRQYLASCAKIGRRGVVSALQFPRCVRSVFGTAVGPVQRMSPSGSTEYHYEGIKVRANALSRFASAGVVHTMPNLAAPSPHTNPSQMHQAQPQQHLRKQVPPIQHHQLQQQLHHRPDSTASPPLVSSPTPSCSPTPSVAPCSPILKAQLSAPPKASKGESKSQVLAHPHLTQALLGSTTGPRNSPPPPIQHPQASSSSSPTVTSSISSSVAVPQPPSSPTAPPVSPSPSTSASPSSSSMGTHTASSSSGSCTSSSSLIKSLLASKVNTGPPDGTPSVGSMPDSRQLQQQRNPTQCMSGMTVPSPHVTTTPIQSHAQSPLVTPPTVSNETPLSPESNQVAQRQQQQRLLMQLQQQQTSATSSTTTSSTTAVANPISPRPSTPSSVTNVTSTTSSTMTAQLAQPQKIQQTLSPVTNKAGTVVGTVLTTGVISKMNEPTSPRPRISRINGARVISMEIDGKEVWDATATPLSPQGPWGADKADSNHLSNSPLRGRRDPPQPPPPLTPHSLTPSPQPISTNLPPPLVSIGGVRSPVCAPPPRPDEDSNSAASSSTVSSGVTGGGNATLQTTPLPVPSNTPSASDGDENSLTSFEGLLLNGGTVVPHSLDIDGNSSIGGGLASNDDDSSSKDSARSGLSRLPNSNPGSGATKVKGMLADLLEKKVGPREPLINGVLGKELRIGEKGLELVENHETVEQNNNPEGGNNDTNQVMSSGNLNPVNPSSGVVSSETVVTSGTVTTTTTTTGSLPPGAIPGGVVVGRVVIAGGTPNTVSMSDVTSQQPPPLRTVVISAGNSSGVVVRPGDGILGGIGGANNSSDAKVQVVGLLGTNAGGVSGQPGAIQTFRIAGGLEELLAGSQVSVEQLKQIIQQQQLQQQQLQQQQLQQQQLQQQQQQQLQQQQQLQQQQQQQQQQQQQQQQQQQQQQQQQQLQQQQLPQQQLISQQQQALKRPAPPLAREVQPEIKRVHLANVPNGNSTPPLIPIVGKDQQVGIPVAYTNQAANATVATSIAGGAIQYSVQSQENMTVASNHQQQQSQQPQIIMKQIDGTVAVSSQATMVQSPALAAQQVRQVLVSQGQGGEQQLIAVAPRQIVLAAPPGSIAGGTVISQGTQTAVPQHHQMVAIQQKAGTAGMLVATSAGGQRQLVPGQVMISQGGGAQVLVSHAQMTSQGPVFVTTQPPNTAGTQQYLVASSSGSVSGGAAGGVNYVVAQPQTALVQGQTQTVLVAQTPQQQGTSAKTIIILQSQGQKMMMATGGSGGQQVVMQVPRASGASIIQAASGGPVTSQACVQVAVSAAQAVMGGGQGGSVTVAVPVATAARAQIVGNHGLIGQPQVQIPQQIQVQQQQIQPQAQVQQPQQVQQTQQVQNPQVQVQQQVQVQSQQVQLQQQMQVQSQQVQVQHVEVQTQQDQQSPQQTQQQTQTQSQQQAQQQQIQQIQLQQQLQQQQLQVQPQLPQQQQQQLQQQQQVQQQHLQQQHQQLQQQLQQQQLQQQQTQQIIQHHPVPQPIQQQEQPQLVLQHQQIQLQPSVTPTPALSPAPSSSTPTPCASPAPSVITMAMSSQSKGQQVTVSTSPKPNLSPNVKGASAMCSVGLASGTAVGKGMPSPSVGMPSRPSTPRAGQQGHDVDHSPQQHQSVISSTNRVNSSPSPHRELHYGQFLCEWRGCMRSFKSANEVYMHACREHCPTAANEEQQCLWERCDGMRRKRFSLMTHLFDRHCNAEVCMKHFPDFRNLNLALKKTITYQSLSLLCPKKPLSICPSSLPPSLSLSLPPLSLPPSLSLPPLSPPSLSPSLSPSLSLPPSLPLPLSPYLSPPPSLPPLSPPPPSLSPSPLSLPLPPLSLPLSPPPPSLPLPPLSPSPLSPLPLSPPPPLSPSPSLSLSLSPSLSPSLSPSPLSLPLPPLSPPPPSLSPSPLSLPLPPLSPPPPSLPLPPSLSPLPPLSPPPPSLSPSLSLPSPPLSLPSPPLSLPSLSLSLPPSLSPPSLSLPLSSSLPLSSSFLQLKALHYYKNSVVVPHALL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01504444;
90% Identity
iTF_01504444;
80% Identity
-