Tacr018085.1
Basic Information
- Insect
- Tachystola acroxantha
- Gene Symbol
- -
- Assembly
- GCA_963506565.1
- Location
- OY735889.1:11283068-11283535[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.2e-09 4.9e-06 26.7 0.0 2 41 23 62 22 65 0.87
Sequence Information
- Coding Sequence
- ATGCCTCCATCGAAACCAAATACTAAAAAAATCGGTGTCGTGAAAAGAAAATTGTTCCAGTACTCACCGCATAAAATATCATTAGCGTTGAACGCAATAAAGAATGGGATGCCCGTTGCCACTGCTAGTAGAGATTTTAACGTACCTCGAACGACTTTGCGTCACAAAATTTATGGAAAAGCGCCTGAAACTTCTGGACATGTAGGGCCCCAGTCAGTTCTTGGAAGACAAATAGAAAACGAACTTGTCATATGGATCAAAGATTGCGCTCGCGCTGGATTTCCTATCAACAAGGAAGGTTTACTGGATTCTGTTAAGAAAATTGTTGTCAAGGGCCAAATTGCTACACCTTTTATAAATGATAGACCTGCAAGATCCTGGGTCGATGGATTTATGGCGAGACATCCTGATTTGAGCCAAAAACATGTCACACTACCTCGTATTGCAGAGTTGCTGATTAGTTTGTAG
- Protein Sequence
- MPPSKPNTKKIGVVKRKLFQYSPHKISLALNAIKNGMPVATASRDFNVPRTTLRHKIYGKAPETSGHVGPQSVLGRQIENELVIWIKDCARAGFPINKEGLLDSVKKIVVKGQIATPFINDRPARSWVDGFMARHPDLSQKHVTLPRIAELLISL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00935639;
- 90% Identity
- iTF_01443777; iTF_00985936; iTF_00935639; iTF_00276313; iTF_00276316; iTF_01076416;
- 80% Identity
- -