Math021556.1
Basic Information
- Insect
- Mellicta athalia
- Gene Symbol
- -
- Assembly
- GCA_905220545.1
- Location
- HG992189.1:15681804-15682259[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-10 1.4e-07 32.4 0.0 2 36 25 58 24 66 0.88
Sequence Information
- Coding Sequence
- ATGCCTCCTACGAAAACAACTCGAAACACTAAAAAAATCGGTGTCGTGAAAAGAAAATTGTTCCAGTACTCACCGCATAAAATAACATTAGCGTTGAACGCAATAAAGAATGGGATGTCCGTTGCCACTGCTAGTAGAGATTTTAACGTACCTCGAACGACTTTGCGTCACAAAATTTCTGGAAAAGCGCCTGAAACTTCTGGACATGTAGGGCCCCAGTCAGTTCTTGGAAGACAAATAGAAAACGAACTTGTCATATGGATCAAAGATTGCGCTCGCACTGGATTTCCTATCAACAAGGAAGGTTTACTGGATTCTGTTAAGAAAATTGTTGTGAAGGGCCAAATTGCTACACCTTACTGTTTACTTATAAATGATAGACCTTCAAGATCCTGGTTCGATGGATTTATGGCGAGACATCCTGATTTGAGCCAAAAACATGTCgagtatatttaa
- Protein Sequence
- MPPTKTTRNTKKIGVVKRKLFQYSPHKITLALNAIKNGMSVATASRDFNVPRTTLRHKISGKAPETSGHVGPQSVLGRQIENELVIWIKDCARTGFPINKEGLLDSVKKIVVKGQIATPYCLLINDRPSRSWFDGFMARHPDLSQKHVEYI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00935639;
- 90% Identity
- iTF_01401230;
- 80% Identity
- -