Basic Information

Insect: Tachina lurida
Gene Symbol: -
Assembly: GCA_944452685.1
Location: CALYBZ010000118.1:243645-251580[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 6.4e-05 0.0062 17.8 3.4 1 23 9 32 9 32 0.99

2 14 0.0003 0.029 15.7 0.2 1 23 38 60 38 60 0.93

3 14 7.7e-07 7.5e-05 23.9 1.1 1 23 66 88 66 88 0.97

4 14 0.00083 0.081 14.3 3.6 1 23 95 117 95 117 0.96

5 14 8.6e-05 0.0084 17.4 1.3 3 23 125 145 123 145 0.98

6 14 1.5 1.4e+02 4.1 2.3 1 14 151 164 151 167 0.88

7 14 0.00092 0.089 14.2 2.2 1 23 219 241 219 241 0.98

8 14 5.9e-06 0.00058 21.1 0.6 1 23 251 273 251 273 0.98

9 14 5.6e-06 0.00055 21.2 1.5 1 23 279 301 279 301 0.93

10 14 6.8e-06 0.00066 20.9 0.1 1 23 307 329 307 329 0.95

11 14 3.3e-05 0.0032 18.7 1.0 1 23 336 358 336 358 0.96

12 14 6.7e-08 6.5e-06 27.2 1.1 1 23 364 386 364 386 0.98

13 14 1.8e-06 0.00018 22.7 3.5 1 23 392 414 392 414 0.99

14 14 0.049 4.8 8.7 0.3 1 23 420 442 420 442 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	6.4e-05	0.0062	17.8	3.4	1	23	9	32	9	32	0.99
2	14	0.0003	0.029	15.7	0.2	1	23	38	60	38	60	0.93
3	14	7.7e-07	7.5e-05	23.9	1.1	1	23	66	88	66	88	0.97
4	14	0.00083	0.081	14.3	3.6	1	23	95	117	95	117	0.96
5	14	8.6e-05	0.0084	17.4	1.3	3	23	125	145	123	145	0.98
6	14	1.5	1.4e+02	4.1	2.3	1	14	151	164	151	167	0.88
7	14	0.00092	0.089	14.2	2.2	1	23	219	241	219	241	0.98
8	14	5.9e-06	0.00058	21.1	0.6	1	23	251	273	251	273	0.98
9	14	5.6e-06	0.00055	21.2	1.5	1	23	279	301	279	301	0.93
10	14	6.8e-06	0.00066	20.9	0.1	1	23	307	329	307	329	0.95
11	14	3.3e-05	0.0032	18.7	1.0	1	23	336	358	336	358	0.96
12	14	6.7e-08	6.5e-06	27.2	1.1	1	23	364	386	364	386	0.98
13	14	1.8e-06	0.00018	22.7	3.5	1	23	392	414	392	414	0.99
14	14	0.049	4.8	8.7	0.3	1	23	420	442	420	442	0.95

Sequence Information

Coding Sequence: ATGCACAAAAATAAAGAACAAAGGTATAAATGTTCAATATGTACAGAAGAGTTTAATGAGAGATGCACATTAAAAGATCACATGCGTACAACGCACAGTGGTGAAAAAGTATTTTTATGCTCAGAATGTGGAAAAGGTTATACAACAGCCGGAGGTCTGAAAGAACATTCGTATCGCCATTTAAAAGAAAAGAACTTCTCTTGTCCTGATTGTCCGCGCTCATTCACAACCAAGACGGATCTGATGTCACATCATATAATACATAAGGCGAAACCAAAAAATCACATTTGTGATATATGCGGACGGGGTTTCCACAAGCCTTTTCTATTAAAAAAGCATAAAATGTATCACAACAATGAGAGACCATTCGGCTGTGAGTTTTGTGTAAAACGttttgtcacaaatgaaaagctaaaacgtcatactcgcattcacaccggcgaaaaaccttacaaatgtaattactgtaagaatgcctactgtcaAAACACTGAAATAACTGATAAGTCTAAAATTCTTAAAAGAGAAGAGTTTGACGACGAAGTATTTGAACCAGTTACATATGACGATGATGAAGATGTTGTTAAAGACGACGACGATGATGATGATGAATATGCGCATTTCAATGTGAAACAAATTAGCGTGCAACAACTATATCCATGTGACAGATGTAAACGAAAATTGAAATCGAAACTATCTTTAAAAAAACATCAGGAAATGCACACAAAACGTGATAATGAGGAGCCAAAATTTATGTGCAATATTTGCGACAGAGGTTTTTCACAAGGTTACATGCTGAAAGATCATCTACGCTCGCATAGTGGTGAAAGGCCATATTTATGTTCGGAGTGCGGCAAGTCCTTCACATCGTCCGGCAGTTTAAAACAACACTCATTCCGCCATCTAAATGAAAAACAATTCTCCTGTCCAGACTGCCCAAAATCTTTTCCCACTAGAACTGATTTGGCGTCCCATTCTGATGTTCATAATGCAAGACCTAGAACacatgtttgcgatatctgcgggcgaggtttcccaaaaccgtttcttttaaaaaaacataaaatgtatcacactaacgatcgaccgttttcctgcgaatactgcggtaaacgttttgtaactaacgagaaactacaacgtcacgtgagaatacatactggcgaaaagccatacaaatgcagttattgcgaaaaagcctactgtcagtcgaatgaattaaccaaacatttgagaatacatttgggtgagaatgtatatcaatgtgaattgtgtcctctaagatttcccacagtcaaagtagttcgagagcatttctctacacacaaaaacgatgatacagaaacTAAAGTTCGCAATTTGGCAGAACTCAATGCCTTGACATTAAAAGGCATTTATTGTAGATAA
Protein Sequence: MHKNKEQRYKCSICTEEFNERCTLKDHMRTTHSGEKVFLCSECGKGYTTAGGLKEHSYRHLKEKNFSCPDCPRSFTTKTDLMSHHIIHKAKPKNHICDICGRGFHKPFLLKKHKMYHNNERPFGCEFCVKRFVTNEKLKRHTRIHTGEKPYKCNYCKNAYCQNTEITDKSKILKREEFDDEVFEPVTYDDDEDVVKDDDDDDDEYAHFNVKQISVQQLYPCDRCKRKLKSKLSLKKHQEMHTKRDNEEPKFMCNICDRGFSQGYMLKDHLRSHSGERPYLCSECGKSFTSSGSLKQHSFRHLNEKQFSCPDCPKSFPTRTDLASHSDVHNARPRTHVCDICGRGFPKPFLLKKHKMYHTNDRPFSCEYCGKRFVTNEKLQRHVRIHTGEKPYKCSYCEKAYCQSNELTKHLRIHLGENVYQCELCPLRFPTVKVVREHFSTHKNDDTETKVRNLAELNALTLKGIYCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01237893; iTF_00259073; iTF_00259944; iTF_00760306;
90% Identity: -
80% Identity: -