Basic Information

Insect: Tachina grossa
Gene Symbol: grau
Assembly: GCA_949987645.1
Location: OX465278.1:28779187-28781015[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.17 22 7.3 0.2 3 23 251 272 250 272 0.94

2 9 1.8e-06 0.00023 23.0 3.1 1 23 305 327 305 328 0.96

3 9 0.00022 0.028 16.4 1.7 3 23 338 358 336 358 0.95

4 9 0.88 1.1e+02 5.0 0.3 1 23 366 391 366 391 0.93

5 9 0.02 2.6 10.2 0.7 3 23 398 418 397 418 0.97

6 9 0.3 39 6.5 0.2 3 23 428 451 426 451 0.80

7 9 0.043 5.5 9.2 7.1 1 23 456 479 456 479 0.97

8 9 2.9e-05 0.0037 19.1 0.2 1 23 484 506 484 506 0.97

9 9 0.00034 0.044 15.8 2.5 1 23 512 535 512 535 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.17	22	7.3	0.2	3	23	251	272	250	272	0.94
2	9	1.8e-06	0.00023	23.0	3.1	1	23	305	327	305	328	0.96
3	9	0.00022	0.028	16.4	1.7	3	23	338	358	336	358	0.95
4	9	0.88	1.1e+02	5.0	0.3	1	23	366	391	366	391	0.93
5	9	0.02	2.6	10.2	0.7	3	23	398	418	397	418	0.97
6	9	0.3	39	6.5	0.2	3	23	428	451	426	451	0.80
7	9	0.043	5.5	9.2	7.1	1	23	456	479	456	479	0.97
8	9	2.9e-05	0.0037	19.1	0.2	1	23	484	506	484	506	0.97
9	9	0.00034	0.044	15.8	2.5	1	23	512	535	512	535	0.97

Sequence Information

Coding Sequence: atgatTTGTTTTGTGTGCACTGAAAACGCGAATGAGACTTTATCAATATTTGAAAAGGACGatgtaaattcaaaaattgcTACAATGATCGAAAAACATTTATGTCTTAAGcCCCAAGTAAAGGAGGAAAAGCCTTTAGAAATATGTGTCAAATGTTGGGAAAAGCTTCGAgattttagcgaattttttgaatttgttgCACAAGCTCATAATGAGCAGAGAAAATTGTTACCAGAATTAGTTTTGGAAAATACAGGCAGCGAGTATGATAAAGGTGCTTGGGACACCAATATTAAGACAGAGAATTTAGAGGAGACGCTGTGTGGAGACGATAATGTGGAGTTAAATTTTCTTGTAACTGGCGATACTTTTACTGAAAATCCTCTTTTAGATATAGAGTCGGAAGTGAATGATGATACGGAAGAATTTCAAAATATAGGTGTTGCAACGGTCAAACCTAAAGCTTTAAAATCTAAACGACccaaaaaactaataaaacgttCTAAATGTTCTAAATCGAGTGATAGTGATGATGAAAACGAACAATCTTTGGCATCCCTTCTAGATGATATTAATAATGAAGACAGCAATAAAATTTACCAtgcagaagtaaataaaaagaaacaaagaaGAAAAGTGCATCGGACTGAAACTAAGCTCTCAAAAAAAGTAGATAAACCGAAACGCCGCAAAGGCCGTGTTTTGTTAGAAGAAAATGAAAGCCTTATTAAGAAGCATATTAAAATGCTATGTCAAATGTGTTCCTATATAGGTGaagatttttcaaatttgaTAAAACATTACAAAGACGAACACGCTGGTGTAAAGCCCTTTATAAAATGCTGTGAACGTAAATTAGATTGTCCATCAGATATTTTACAGCATGCTTATTTCCATGAAGATCCTGAACACTTTAAGTGCCAAGAGTGcggaaaaacatttataaataaCTCTGGCCTAAAAGACCATTTTATGAAACATCACGAACCGGAAGAAAATCTTCCCTATGGCTGCGATGAGTGCCCACGTCGATTTTCAAGAAAAAATCTTTTGGCTCATCACAAAGCAAAGCATATACCGAAAACGGAAAGATCACACTTTTGCCAAATATGTGAACCACCCAAAGCatttgcAAGTGAGTACATACTACAGATTCATATAAAGTCACGCCATACGAAAGCCTCTAATATATGTCATGTGTGCGCAAAAGAAATACGAGATAAACAAGCTTTTGAGAAACATGTGCGATTGCATTTCGAGACTAGCGGTCCACGTATTAAATGCCCCCGAGAAGGTTGCGAAAGTTGGCTTAAGGATGAGGATAATTTGAAACAACACTTAAGACGCTTCCATAACCAATCTAAATACGAGTGCCCTGAATGTAGCCGCATATGTAAAAACAAGCATTCTTTAACATGCcatttaagaaatacacattcCACGCAAATCTTTACATGTGAAGAATGCCAAAAGGGCTTTAAAAGTGCTTTATCCTTAAAGGAGCATATGGCTGGTCACACGGGGGAACCTCTATACAATTGCCCGTTTTGTACGAGAACTTTCAATTCCAAGGCAAATATGTACTCTCATAAGAAAAAAGCTCATCCCATAGAATGGGATTTAGTTCACAAATCAAAAATGggtttcatataa
Protein Sequence: MICFVCTENANETLSIFEKDDVNSKIATMIEKHLCLKPQVKEEKPLEICVKCWEKLRDFSEFFEFVAQAHNEQRKLLPELVLENTGSEYDKGAWDTNIKTENLEETLCGDDNVELNFLVTGDTFTENPLLDIESEVNDDTEEFQNIGVATVKPKALKSKRPKKLIKRSKCSKSSDSDDENEQSLASLLDDINNEDSNKIYHAEVNKKKQRRKVHRTETKLSKKVDKPKRRKGRVLLEENESLIKKHIKMLCQMCSYIGEDFSNLIKHYKDEHAGVKPFIKCCERKLDCPSDILQHAYFHEDPEHFKCQECGKTFINNSGLKDHFMKHHEPEENLPYGCDECPRRFSRKNLLAHHKAKHIPKTERSHFCQICEPPKAFASEYILQIHIKSRHTKASNICHVCAKEIRDKQAFEKHVRLHFETSGPRIKCPREGCESWLKDEDNLKQHLRRFHNQSKYECPECSRICKNKHSLTCHLRNTHSTQIFTCEECQKGFKSALSLKEHMAGHTGEPLYNCPFCTRTFNSKANMYSHKKKAHPIEWDLVHKSKMGFI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01177301;
90% Identity: iTF_01074875; iTF_01399858; iTF_01397926;
80% Identity: -