Tgro037703.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tachina grossa
Gene Symbol
RREB1
Assembly
GCA_949987645.1
Location
OX465277.1:92705572-92712761[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.031 4 9.6 1.7 1 21 228 248 228 250 0.95
2 13 0.00054 0.069 15.2 0.2 1 23 260 282 260 282 0.98
3 13 3.7e-05 0.0048 18.8 7.5 1 23 288 310 288 310 0.98
4 13 4.9 6.3e+02 2.7 0.0 1 23 529 553 529 553 0.87
5 13 5.2 6.6e+02 2.6 3.2 2 20 559 577 558 578 0.92
6 13 0.031 4 9.6 0.0 1 23 718 740 718 740 0.97
7 13 1.8e-05 0.0023 19.8 1.2 1 23 750 772 750 772 0.99
8 13 0.0013 0.17 13.9 2.0 1 23 778 801 778 801 0.97
9 13 0.0047 0.61 12.2 2.0 1 23 1161 1184 1161 1184 0.95
10 13 0.00029 0.037 16.0 1.0 3 23 1523 1543 1521 1543 0.97
11 13 0.23 30 6.9 6.3 1 23 1549 1572 1549 1572 0.97
12 13 0.14 17 7.6 1.1 3 23 1748 1768 1747 1768 0.91
13 13 0.0016 0.2 13.7 5.7 1 23 1774 1796 1774 1796 0.99

Sequence Information

Coding Sequence
atgttagTCGCTACAAATCCTCAACAAACTGCCCAAAACAGTCCCAAAACAACCAGAGCTAATACCCCAATAAAAATGGAAAGACGAGACTCATCTTCCTCGTACTCGTCGCTGGAAGATTTAGAGCAagccagaaaaaaattaaatgctgtCACCTCAACGCCGATGGTGGCCGGTGATGCTGCAAATCTTTGCAATGTAAGTGTCAAAACAAATGCAAAATCAATTCAGAGTTCCGATGCCATTGATCAGCAACAAAACCTACATCAGCGTATGCAAGAGTCCGATGAGGCTAATGATTATGACGAGGACGAATCGGCTGACGAGAAATGTACACAACCGCGTGAACATTACAAGCGTCGCCTGAGCAGCCGCAGTCTAACAGATAAAACTACCAGCTATTTGGTGGATTTTAATGCCAATAACCCGAATTCCTTACGTAAGAAATTCCGCTCTAATCGTTTTGCACTAAACAATGGCGATGAGTCGGGTTTCGTGGACACTAGCAGCAATAGCCAATTGAAAAATGTGACGTCATCATCTTTAACAGTTGCAGCAACGATTGAAGCAAACTCGAATAACAATTCCAAATCAAATAGTTCTTCACATTCCTCATCGCCTCCGCAAAGCAATGGCAATTCTAGTCCAGAATCTGGTATAGGAGAACGTGAAGATATGAAATACATGTGTCCCATATGCGATGCAGTTTCCCAAACGGCCCATCAATTCACAAATCACATACGTTGTCACAATTACGCCTCAGGTCATACGGAGAACTTTACTTGCCGTATTTGCTCAAAGGTGTTATCATCAGCCTCTTCATTAGATCGCCATGTTCTAGTACACACAGGAGAACGACcatttaattgtaaatattgtCATCTGACATTTACTACCAATGGGAATATGCATCGTCATATGCGTACCCATAAGCAGCATCAACATACTCATCACAGACGTAACTCGAATGGAACAAAGTTCAACACCAGCAGCAATAATAActataatagtaataataataacgcaacaacagcaacaacaaccaCAACGACACCAGCTGTAAACAACACAGCATTAAGTAATGGACAATTAAATGAAGGCGTTAAATTGTCAACAAGCGAAACAACGCtggcagcagcagcagcagcagcaccaGCAACAACAATGACAACACCAGCGccagcagcaacaacagcaatcACAACAGCCAACGATTCTGACAATAATTATAATCAAAAGGCAACAAGTGCTAATGGTGAACGATTAAATGGTAACGCCAACTTAGAAAGTTATGAAAGTGATGGTGGCTGCTCATCAGATTCATCAGCAGCTCGTGTtcacaacagcaacaacaacaacaataacaataataataatgacaaacaaaataataacaacgattttaaaattaacaataataactATAAACGAAAGCATAGTGATGATCACACGCATGAAGACGTACCGAATTCAAAAGAAAACAATCATGACCTTTTGAAGCATCGTTTAAGACCTGATAGTTCCAACTCAGCCTCCGTCCCATATCACACCAATGAAATCTTAAACAACACACCAACTAATTCGTTCGTTTGTCCCATTTGCAATGATAGCGATTTCGCTGATAATATGGCTCTTGACCAGCACATTGATATCAAACATCCAAAAATTCCCACCAAATGCAAACATTGTGGTGTAATATATCTTACTCAGCATCAGTTTAACATACATGTCTGTCCGGCCGACATCAAAAGTTCTATTAATTTGTCGGTGAAACACAGGCGGTTAAGTGAAACTTCTAAAGATCATACGGCAGAAGAGCGTGATGAGCCGGaagacaatgcaaagcaaagaCATGAACTAtttcaacattttaaaaatgccATGGCCCAAAGTAATTCAGCTTCGTCTCACTTCAATCAAGACTTAAACGAAGACGATGTTAAGTCTGAACCATCGGCTCATGATTCAAAAGATTTAGCAGATATTCAATCAATCTTGAATATGACAGCATCTTCGAGTAACTCAAACTTACTCAGGAACTTTGAACAAACAGTGAATACTCCCTCCTCCCAATATAGTTATGATAGGGATGAAGAGGAAGCGCAGGATGCATTCACCTCCGAGTTTCGTAAAATGAAGTTGCGCGGTGAATTTCCCTGCAAACTCTGTCCAGCCGTGTATCCAAACCTACGAGCTTTGAAAGGCCACAATCGGGTGCATTTAAGCGAGGCTGGTCCAGCCGGTCCCTTCCGTTGCAATATGTGCCCTTATTCGATATGTGATAAAGCAGCCTTGATTCGTCATATGCGCACTCATAATGGCGATCGTCCGTATGAGTGTGCGGTCTGTAATTATGCATTTACAACCAAAGCCAATTGCGAAAGACATTTGCGCAATCGCCATGCCAAAACTACTCGTGATGAAGTTAAACGTGCCATTATATATCATCCGTCAGAAGATTCATCCTGTGACGATACCGCCAAAAAATTGCACATGTTTTCATCCGAATTGGAGGAAGATTATGAATTGATGCCTTATCATCAACATCAGCCAAAAGATCGCTCAACTCCGGTATCTCACCTTAAGGAACGATTAACAGCAGCTGATAGTCCCTCTGCGAAACCAGTTAAGATTCAGGTGAAAAGTCTTGAAGATCTCTTGGATAAATCTACAGCTTCATCAGGCTACCATGATAGCTACGACAGGCGTAACACTGAAACACCTCAAGCCCCTATTGATATGAGCATGGACGTTTTAGATTTAAGTAAAAAACCAAGTGCACCCCCGCCACAAGTTCAAGAAGAAAAGGTGGAATCATCTCCGCCTATACCATCTTTACCAAAACCAAATGTCAACCCCATCAGCGAATTAATAAATACCAAAGTAGTTCCCATGGCAGGTGAGCCGAAATTGGACATATCAACTTTGGATAAACAGCACCAACAATTGCTTTTAGCTCAACAACAATTACTCAGTGATCCAAATCAATTGATGCAGCAATTATATAGAAATTTCCTGTTCCCGCAATTCCCTCCCTTCTTTATGCCCAATACTTTTATGAACAGCAGTTTTGcagactttcaaaaaattgCTCCTATTCTAACTCGTATGATGGGTGGTgttgcagcagcagcagcagcaattCCAAACAACGATGTTGAAAAACCAACTATATTACCACCACCAATGAATACCAACAATATTAACAGCAACAACACTCCAAGCGTGCCGCAAATTAGTCCACTAGTATCTGAAAAATCTAATTCTGCATCAATGGCTGCAATGTCGTCGCCTAAGACTTTACTTTCACCAAATACAAATCATTTGAATATGTCAAGACATTTAATGCCCCCTACTGCACCACCTCACTCCCCAAATTTGCCACCAACTATGCTTTCAAATGGTCCTGTCAAAATGGTGCTCAAAAATGGTGTATTCATGCCCAAGCAAAAACAAAGACGTTACCGCACTGAACGGCCATTTGCTTGTGAGCATTGCTCGGCCCGTTTCACTTTACGCTCAAACATGGAACGCCATGTCAAACAACAACACCCCCAGTTCTATGCGCAACGACAACGCAGTGGGCATCATGTTATGCGCGGCCGAGGAGCCAGCAGTGCCgctaatataaataatatctCTCATTTTCAAGCTGTAGCTCAAGCTCATTATAACTCTCCACCTCCTCCGGTTAGTTCCCATTCTCCAATTTCCGATCAGGTTAAATGTGCTATATTGGCACAACAACTTAAGGCACGCAAAGACACAGACCTGCTGCAACAAGCCTTAGCTCATGGTTCTAACAGCGTAACCAATTCAAATATGTTTTCCCAACAAGGACCAAATCTTATTAATGGACAAGGCAATTATTACGGTTTCAATCCAAACCATAGCAATCATCTGAGTCAAAACGGCACACCAAATGGATCCATGGAAGATGATGAACCAAAGTTGATAATCGATGAAGATGATGAGGACGAAGAAGATGAAGAAGATATTGAAGAAATTCCAGATTACCAcgaggaggaggaggaggaaAATGACTTGGCATTAAATGAATGCGAAGACAAATTGCAAGCATATAATTTGCCAACAACAATTGAAGAAGTTAAACTTAAGTCAACTGAACCACAAGAATCTGCTAAGAGAGTCgctgagtccattttagaacaAGCCATTAAAGCCAAGCAAAATATAAGTCCTTTTGCTGCTAAAACTTCAGATCCCACTTTGATAACTCCCAACAATAACACTATGAAATCCATGATTGCTCAAGCTCCGGCAGTTGGTAAATTTTTGAAGGAAGTGGCCAGCTCTTCATTCAAAGACGAGTCCCAAGATTTGGCTTCAGTCTCTGAATTAGTAGATAATGCCACTAACAATGCGGTATCGTTCAACAGCTATTTCCGTCCATCAGATGTAGCGAATCATATGGAACCCAGCGATGAAGATGGCTTAGTAGCATCATCGGCAAGTGAAAGTAACAATTCAGGAGCCGAAGATACTGTGAGTACTGAAAAACCTAAGAAAAAGTCGGCGTACAGTTTAGCTCCGAACAGAGTTCATTGCCCCTATTGCCAACGCATGTTCCCTTGGTCCAGTTCGCTCAGAAGACACATTCTCACCCATACGGGACAGAAGCCATTCAAGTGCTCTCACTGCCCTCTCTTGTTTACAACCAAAAGCAATTGTGACCGTCATCTTTTGCGAAAACATGGAGACGTAGAATCCGCTGTATCTGTGTACGTGCCAACTGAAGACGTGTCCGAACCCATTCCTTTGCCTAAGTCAGTCGAGGAAATAGAACGGATGCAAAGAGAACGCGAGGAAGAAGAGCGCAAACGTAAAGCTGAAGAACAAAGAGAACGtttagaaaaagagcaaatggaaaagcaaaaatttgaacAGGAACAACAAAAACAAGCATTTTTGAAACAATTAGCTGCCGCACAATTTCAACAGCAATTCGCGCAAAAGCCTGAAACCAATCCAGTTTCCTCCTCGGAGCTGCCTTTCAAATGTCACCTGTGCGAAAGTTCATTTTCTGAACGGCTACACTGTTTAGAACACATTAAATCGCTGCACGTCCAAGAGTTCGCTTTACTGCTGTCAAAAGGAGCTATTGAAAGCGAAACAGACTGTGCTCAAATGGCGTCAAATGAAGAAGATGAACGCCAACGAACTGCCGAAGATACTGCTAAAGGCGGTAAGTACCCAGATTATAGTAACCGGAAAGTCATTTGTGCTTTCTGCATGAGACGCTTCTGGTCAACTGAAGATCTGCGCAGGCATATGCGCACTCACTCTGGCGAAAGGCCATTCCAATGTGAAATTTGCTTCAGAAAATTCACCCTTAAGCACAGCATGCTCCGTCACATGAAGAAACATAATGGCCTGCACATTAATGGCATGCAGTCAAATAGCGACAGTTTGGTCAATGGAAATTCTGGTTCCGATTATTCGGACGATGAACAGACGCCGAATTCATTGCCAACACCTGCTCTACCAATACCAACTACCAGTATTAATGCATTATTAATGGGCTCAAAATTCCAAGAACTTTTGCACAAAGCCAACGAATGGAGAAATGGTAACTTAAATGCATTACGAGATGGTAAAGAAAACCATTCAGAGGAGACAAACGCACCACAGTCATCGGATTTGATTGGTAACTTGTTGGGCATTAGTGATCAAGGTATACTGAACAAATTAATGTCATCACCAGATGAAGCGGCTAAACTTTTAGGTGTTGACAAATAA
Protein Sequence
MLVATNPQQTAQNSPKTTRANTPIKMERRDSSSSYSSLEDLEQARKKLNAVTSTPMVAGDAANLCNVSVKTNAKSIQSSDAIDQQQNLHQRMQESDEANDYDEDESADEKCTQPREHYKRRLSSRSLTDKTTSYLVDFNANNPNSLRKKFRSNRFALNNGDESGFVDTSSNSQLKNVTSSSLTVAATIEANSNNNSKSNSSSHSSSPPQSNGNSSPESGIGEREDMKYMCPICDAVSQTAHQFTNHIRCHNYASGHTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHTHHRRNSNGTKFNTSSNNNYNSNNNNATTATTTTTTPAVNNTALSNGQLNEGVKLSTSETTLAAAAAAAPATTMTTPAPAATTAITTANDSDNNYNQKATSANGERLNGNANLESYESDGGCSSDSSAARVHNSNNNNNNNNNNDKQNNNNDFKINNNNYKRKHSDDHTHEDVPNSKENNHDLLKHRLRPDSSNSASVPYHTNEILNNTPTNSFVCPICNDSDFADNMALDQHIDIKHPKIPTKCKHCGVIYLTQHQFNIHVCPADIKSSINLSVKHRRLSETSKDHTAEERDEPEDNAKQRHELFQHFKNAMAQSNSASSHFNQDLNEDDVKSEPSAHDSKDLADIQSILNMTASSSNSNLLRNFEQTVNTPSSQYSYDRDEEEAQDAFTSEFRKMKLRGEFPCKLCPAVYPNLRALKGHNRVHLSEAGPAGPFRCNMCPYSICDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSSCDDTAKKLHMFSSELEEDYELMPYHQHQPKDRSTPVSHLKERLTAADSPSAKPVKIQVKSLEDLLDKSTASSGYHDSYDRRNTETPQAPIDMSMDVLDLSKKPSAPPPQVQEEKVESSPPIPSLPKPNVNPISELINTKVVPMAGEPKLDISTLDKQHQQLLLAQQQLLSDPNQLMQQLYRNFLFPQFPPFFMPNTFMNSSFADFQKIAPILTRMMGGVAAAAAAIPNNDVEKPTILPPPMNTNNINSNNTPSVPQISPLVSEKSNSASMAAMSSPKTLLSPNTNHLNMSRHLMPPTAPPHSPNLPPTMLSNGPVKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASSAANINNISHFQAVAQAHYNSPPPPVSSHSPISDQVKCAILAQQLKARKDTDLLQQALAHGSNSVTNSNMFSQQGPNLINGQGNYYGFNPNHSNHLSQNGTPNGSMEDDEPKLIIDEDDEDEEDEEDIEEIPDYHEEEEEENDLALNECEDKLQAYNLPTTIEEVKLKSTEPQESAKRVAESILEQAIKAKQNISPFAAKTSDPTLITPNNNTMKSMIAQAPAVGKFLKEVASSSFKDESQDLASVSELVDNATNNAVSFNSYFRPSDVANHMEPSDEDGLVASSASESNNSGAEDTVSTEKPKKKSAYSLAPNRVHCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVSEPIPLPKSVEEIERMQREREEEERKRKAEEQRERLEKEQMEKQKFEQEQQKQAFLKQLAAAQFQQQFAQKPETNPVSSSELPFKCHLCESSFSERLHCLEHIKSLHVQEFALLLSKGAIESETDCAQMASNEEDERQRTAEDTAKGGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEICFRKFTLKHSMLRHMKKHNGLHINGMQSNSDSLVNGNSGSDYSDDEQTPNSLPTPALPIPTTSINALLMGSKFQELLHKANEWRNGNLNALRDGKENHSEETNAPQSSDLIGNLLGISDQGILNKLMSSPDEAAKLLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00260066;
90% Identity
iTF_01397893; iTF_01074864; iTF_01399807;
80% Identity
-