Basic Information

Insect: Tachina fera
Gene Symbol: RREB1
Assembly: GCA_905220375.1
Location: LR999966.1:75327266-75333518[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.031 3.6 9.6 1.7 1 21 228 248 228 250 0.95

2 13 0.00053 0.061 15.1 0.2 1 23 260 282 260 282 0.98

3 13 3.7e-05 0.0043 18.8 7.5 1 23 288 310 288 310 0.98

4 13 7.9 9.1e+02 2.0 0.0 1 23 545 569 545 569 0.70

5 13 5.1 5.9e+02 2.6 3.2 2 20 575 593 574 594 0.92

6 13 0.031 3.6 9.6 0.0 1 23 734 756 734 756 0.97

7 13 1.8e-05 0.0021 19.8 1.2 1 23 766 788 766 788 0.99

8 13 0.0013 0.15 13.9 2.0 1 23 794 817 794 817 0.97

9 13 0.0047 0.54 12.2 2.0 1 23 1181 1204 1181 1204 0.95

10 13 0.00029 0.033 16.0 1.0 3 23 1545 1565 1543 1565 0.97

11 13 0.23 26 6.8 6.3 1 23 1571 1594 1571 1594 0.97

12 13 0.13 15 7.6 1.1 3 23 1771 1791 1770 1791 0.91

13 13 0.0016 0.18 13.7 5.7 1 23 1797 1819 1797 1819 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.031	3.6	9.6	1.7	1	21	228	248	228	250	0.95
2	13	0.00053	0.061	15.1	0.2	1	23	260	282	260	282	0.98
3	13	3.7e-05	0.0043	18.8	7.5	1	23	288	310	288	310	0.98
4	13	7.9	9.1e+02	2.0	0.0	1	23	545	569	545	569	0.70
5	13	5.1	5.9e+02	2.6	3.2	2	20	575	593	574	594	0.92
6	13	0.031	3.6	9.6	0.0	1	23	734	756	734	756	0.97
7	13	1.8e-05	0.0021	19.8	1.2	1	23	766	788	766	788	0.99
8	13	0.0013	0.15	13.9	2.0	1	23	794	817	794	817	0.97
9	13	0.0047	0.54	12.2	2.0	1	23	1181	1204	1181	1204	0.95
10	13	0.00029	0.033	16.0	1.0	3	23	1545	1565	1543	1565	0.97
11	13	0.23	26	6.8	6.3	1	23	1571	1594	1571	1594	0.97
12	13	0.13	15	7.6	1.1	3	23	1771	1791	1770	1791	0.91
13	13	0.0016	0.18	13.7	5.7	1	23	1797	1819	1797	1819	0.99

Sequence Information

Coding Sequence: ATGTTGGTCGCTACAAATCCTCAACAAACTGCCCAAAACAGTCCCAAAACAACTAGAGCTAATACGCCAATAAAAATGGAAAGACGAGACTCATCTTCCTCGTACTCGTCGCTGGAAGATTTAGAGCAAgccaggaaaaaattaaatgctgtTACCTCAACGCCGATGGTGGCAAGTGAGGCTGCAAATCTTTGCAATGTAAGTGTCGAAACAAATGCAACATCAATTCAGAGGTCCGATGCCATTGATCAGCAACAAAACCTGCATCAGCGCATGCAAGAGTCCGATGAGGCTAATGATTATGATGAGGACGAATCAGCTGACGAGAAATGTACACAACCGCGTGAACACTACAAGCGTCGCCTGAGCAGCCGCAGTCTAACAGATAAAACTACCAGCTATTTGCTAGATTTTAATGCTAATAACCCGAATTCCTTACGCAAGAAATTCCGCTCTAATCGTTTTCCTTTAAACAATGGCGATGAGTCGGGTTTCGTGGATACTAGCAGCAATAGCCAATTGAAAAATGTGACGTCATCATCTTTAACAGTTACAGCAACGATTGAAGCGAACTCGAATAACAATTCCAAATCAAATAGTTCTTCAGATTCCTCATCGCCACCCCAAAGTAATGGTAATTCTAGTCCAGAATCTGGTATAGGAGAACGTGAAGATATGAAGTACATGTGTCCCATATGCGACGCAGTTTCACAAACGGCCCATCAATTCACAAATCATATACGTTGTCACAACTACGCCTCGGGTCATACGGAGAACTTTACTTGCCGTATTTGCTCAAAGGTGTTATCATCAGCCTCTTCATTGGATCGCCATGTTCTAGTACACACCGGAGAACGACCATTCAATTGTAAATATTGTCATCTGACATTTACTACAAATGGGAATATGCATCGTCATATGCGTACCCATAAGCAGCATCAACATACTCATCACAGACGTAACTCGAATGGAACAAAGTTCAACACCAGCAACAATAATAactataatagtaataataacaacgcaacaacaacaacaacaacaacaacaacaacggcaCCTGCTGTAAACAAAACAGCATTAAGTAATGGACAATTAAATGAAGGCGTTAAATTATCAACAAGCGAAACAACGCTGGccgcagcagcagcagcaacaacaacaacaacaacaaccacaatGACAACACCAGTGCCAGCAGCAATGGCACTGGTAGCAGCAACAGCAATCACAACAGCCAATGATTCTgacaataattataatcaaaaggCAACAAGTGCTAATGGTGAACGATTAAATGGTAACGCCAACTTAGAAAGTTATGAAAGTGATGGTGGCTGCTCATCAGATTCATCAGCAGCTCATGttcacaacagcaacaacaataacaacaataacaacaacaacaacaataataataataatgacaaacaaaataataacaacgattttaaaattaacaataataacTATAAACGAAAGCATAGTGATGATCACACGCACGAAGACGTACCGGATTCAAAGGAAAACAATCATAACCTTTTGAAGCATCGTTTAAGACCTGATAGTTCTAACTCACCCTGCGTCCCATATCACAGCAATGAATTCTTCAACAACACACTAAGTAATTTGTTCATTTGTCCTATTTGCAATGAAAGTGATTTCGCTGATAATCTGGCTCTTGACCAGCACATTGATAGCAAACATCCAAAAATCCCCACCAAATGCAAACATTGTGGTGTAATATATCTTACACAGCATCAATTTAACATACATGTCTGTCCGGCCGATATCAAAAGTTCTATAAATTTGTCGGTCAAACACAGGCGGTTAAGTGAAACTTCTAAACATCATGCGGCAGAAGAGCGTGATGAACCTGAAGACACTACAAAACAAAGACATGAACtatttcaacattttaaaaatgccATGGCCCAAAGTAATTCGGCTTCGTCTCATTTCAATCAAGACTTGAACGAAGACGATGTTAAGTCTGAACCATCGGCTCATGATTCAAAAGATTTAGCTGATATTCAATCAATCTTGAATATGACAGCATCTTCGAGCAACTCAAACTTACTCAGAAACTTTGAACAATCAGTGAATACTCCTTCTTCGCAATATAGTTATGACAGGGATGAAGAGGAAGCGCAGGATGCATTCACCTCCGAGTTTCGTAAGATGAAGTTGCGTGGTGAGTTTCCCTGCAAGCTCTGTCCAGCCGTTTATCCAAACTTACGAGCTTTGAAAGGCCACAATCGAGTGCATTTAAGTGAGGCTGGTCCAGCTGGGCCCTTCCGTTGCAATATGTGCCCTTATTCGATATGTGATAAAGCAGCCTTGATTCGTCATATGCGCACTCACAATGGCGATCGTCCGTATGAGTGTGCGGTCTGTAATTATGCTTTTACAACTAAAGCCAATTGCGAAAGACATTTGCGCAATCGCCATGCCAAAACTACGCGCGAGGAAGTTAAACGTGCCATTATATATCATCCATCAGAGGATTCGTCCTGTGAAGACGCCGCCAAAAAATTGCACATGTTTTCATCCGAGTTGGAAGAAGATTATGACTTGATGCCTTATCATCAACATCAGCCAAAAGATCGTTCAACTCCGGTATCTCACCTTAAGGAACGATTAACAGCAGTTGATGGTCCCTCTGCGAAACCAGTTAAGATTCAGGTGAAAAATCTTGAAGATCTCTTGGATAAGTCTACAGCTTCATCAGGATACCATGATAGCTACGATAGGCGCAACACAGAAACACCGCAGGCCCCTATTGATATGAGCATGGACGTTTTAGATTTGAGTAAAAAACCTAGTGTTCCCCTGCCACCAGCTCAAGAAGAAAAGGTAGAATCATCTCTACCTCTACCTATACCATCTTTACCAAAATCAAATGTTAACCCCATTAGCGAATTAATAAATACCAAAGTAGTTCCCATGGCAGTTGAACCAAAGTTGGACACGCCAAGTTTGAATAAACAGCACCAACAATTGCTTTTAGCTCAACAACAATTACTCAGTGATCCAAATCAATTGATGCATCAATTATATAGAAATCTCCTGTTCCCGCAATTCCCTCCGTTTTTTATGCCCAATACTTTTATGAACACCAGTTTTGCAGACTTTCAAAAAATTGCTCCTATTCTAACTCGTATGATGGGTGGTGTTgcagtagcagcagcagcagcaatgcCAAACAGCGATGTTGAAAAACCAACTACGCTAGCACCACCAATGAATACTAACAACAACATTAACAGCGACAACAGTCCAAGCGTGCCGCAGATGAGTCCAATAGTATCTGAAAAATCTAATTCTGCATCAATGGCTGCAATGCCTTCGCCTCAGACTTTACTTTCACCAAATACAAGTCATTTGAATATGCCAAGACATTTAATGCCCCCTTCTGCATCACCTCACTCCCCAAATCTGCCGCCAACAATGCTTTCAAATGGACCTGTCAAAATGGTGCTCAAGAATGGTGTGTTCATGCCCAAGCAAAAACAAAGACGTTACCGAACTGAACGGCCATTTGCTTGTGAGCATTGTTCAGCCCGTTTTACTTTACGCTCAAATATGGAACGCCATGTCAAACAACAACACCCCCAGTTCTATGCGCAACGACAACGCAGTGGACATCATGTTATGCGCGGCCGAGGTGCCAGCAGTGCTGCTAACATAAATAATATCTCTCATTTTCAAGCTGTAGCTCAAGCTCATTACAACACTGCACCGCCCCCGGCTAGTTCCCACTCCCCAATTTCCGATCAGGTTAAATGTGCTATATTAGCACAACAGCTTAAGGCACGTAAAGACACAGACCTGCTGCAGCAAGCCTTAGCTCATGGTTCCAACAGTGTAACCAATTCAAATATGTTTTCCCAACAAGGACCAAATCTGATTAATGGACAAGGCAATTATTACGGCTTCAATCCAAaccataaccatcatttgagtCAAAACGGCACACCAAATGGATCCATGGAAGATGATGAACCAAAATTAATAATCGATGAAGATGATGAGGACGAAGAAGACGAAGAAGATATTGAAGAAATTCCAGATGACCACGaagaggaggaggaggaggaggaaaATTACTTGGCATTGAATGCATGCGAAGACAAATTGCAAGCACATCATTTGCCAACAATAGTTGAAGAAGTTAAACTTAAGTCAACTGAACCACAAGAGTCTGCTAAGAAAGTCGCTGAGTCCATTTTAGAACAAGCCATTAAAGCCAAGCAAAATGTAAACCCTTTTGCTGCTAAAACTTTAGATCCCACTTTGATAACTCCCAACAATAACACTATGAAATCCATGATTGCTCAAGCTCCGGCAGTTGGTAAATTTTTGAAGGAAGTGGCAAGCTCTTCATTCAAAGATGAGTCCCAAGATTTGGCGTCAGTCTCTGAATTAGTAGATAATGCCACTAACAATGCGGTATCTTTTAACAGTTATTTCCGTCCATCCGATGTAGCGAATCATATGGAACCCAGCGATGAAGATGGCTTAGTCGCATCTTCGGCAAGTGAAAGTAATAATTCAGGAGCCGAAGATACTGTAAGTACTGAAAAACCTAAGAAAAAGTCGGCTTACAGCTTGGCCCCGAACAGGGTTCATTGCCCCTATTGCCAACGCATGTTCCCTTGGTCCAGTTCCCTCAGAAGACACATTCTCACTCATACGGGGCAAAAGCCCTTCAAGTGCTCTCACTGCCCTCTCTTGTTTACAACCAAAAGCAATTGTGACCGTCATCTTTTGCGAAAACATGGAGATGTAGAATCTGCTGTATCTGTGTATGTGCCAACTGAAGACGTGTCCGAACCGATTCCTTTGCCCAAGTCAGTCGAGGAAATAGAACGCATGCAAAGAGAACGCGAGGAAGAAGAGCGCAAACGTAAAGCTGAAGAACAAAGAGAACGTTTAGAAAAAGAGCAAATGGAAAAGCAAAAATTTGAACAAGAACAACTACAAAAACAAGCATTCCTGAAACAACTAGCTGCCGCACAATTTCAACAGCAGTTCGTGCAAAAGCCTGAAACCAATCCAGTTTCCTCCTCGGAGCTGCCTTTCAAATGTCACCTGTGCGAAAGCTCATTTTCTGAACGCCTGCACTGTTTAGAACACATTAAATCGCTGCACGCCCAAGAGTTCGCCTTACTGCTGTCGAAAGGAGCTATTGAAAGTGAAACAGATTGTGCTCAAATGACATCAAATGAAGAAGATGAACGCCAACGAACTGCCGAAGATACTGCTAAAGGCGGTAAGTACCCAGATTATAGTAACCGTAAAGTCATTTGTGCTTTCTGCATGAGGCGTTTCTGGTCAACTGAAGATCTGCGCAGGCATATGCGCACTCACTCTGGTGAAAGACCATTCCAGTGTGAAATTTGCTTTAGGAAATTCACCCTTAAGCACAGCATGCTCCGTCACATGAAAAAACATAATGGCCTGCATATTAATGGCATGCAGTCGAATAGCGACAATTTGGTCAATGGAAATTCTGGCTCCGATTACTCGGACGATGAACAGACGCCGAACTCATTGCCAACACCTGCTCTACCAATACCAAGTACCAGTATTAATGCATTATTAATGGGCTCAAAATTCCAAGAACTTCTGCACAAAGCTAACGAATGGAGAAATGGTAACTTAAATGCATTACGAGATGGTAAAGAAAACCATTCAGATGAGACTAACGCACCACAGTCATCGGATTTGATTGGTAACTTGTTGGGCATTAGTGATCAAGGTATACTAAACAAATTAATGTCGTCACCAGATGAAGCGGCTAAATTTTTAGGTGTTGACAAATAA
Protein Sequence: MLVATNPQQTAQNSPKTTRANTPIKMERRDSSSSYSSLEDLEQARKKLNAVTSTPMVASEAANLCNVSVETNATSIQRSDAIDQQQNLHQRMQESDEANDYDEDESADEKCTQPREHYKRRLSSRSLTDKTTSYLLDFNANNPNSLRKKFRSNRFPLNNGDESGFVDTSSNSQLKNVTSSSLTVTATIEANSNNNSKSNSSSDSSSPPQSNGNSSPESGIGEREDMKYMCPICDAVSQTAHQFTNHIRCHNYASGHTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHTHHRRNSNGTKFNTSNNNNYNSNNNNATTTTTTTTTTAPAVNKTALSNGQLNEGVKLSTSETTLAAAAAATTTTTTTTMTTPVPAAMALVAATAITTANDSDNNYNQKATSANGERLNGNANLESYESDGGCSSDSSAAHVHNSNNNNNNNNNNNNNNNNDKQNNNNDFKINNNNYKRKHSDDHTHEDVPDSKENNHNLLKHRLRPDSSNSPCVPYHSNEFFNNTLSNLFICPICNESDFADNLALDQHIDSKHPKIPTKCKHCGVIYLTQHQFNIHVCPADIKSSINLSVKHRRLSETSKHHAAEERDEPEDTTKQRHELFQHFKNAMAQSNSASSHFNQDLNEDDVKSEPSAHDSKDLADIQSILNMTASSSNSNLLRNFEQSVNTPSSQYSYDRDEEEAQDAFTSEFRKMKLRGEFPCKLCPAVYPNLRALKGHNRVHLSEAGPAGPFRCNMCPYSICDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCEDAAKKLHMFSSELEEDYDLMPYHQHQPKDRSTPVSHLKERLTAVDGPSAKPVKIQVKNLEDLLDKSTASSGYHDSYDRRNTETPQAPIDMSMDVLDLSKKPSVPLPPAQEEKVESSLPLPIPSLPKSNVNPISELINTKVVPMAVEPKLDTPSLNKQHQQLLLAQQQLLSDPNQLMHQLYRNLLFPQFPPFFMPNTFMNTSFADFQKIAPILTRMMGGVAVAAAAAMPNSDVEKPTTLAPPMNTNNNINSDNSPSVPQMSPIVSEKSNSASMAAMPSPQTLLSPNTSHLNMPRHLMPPSASPHSPNLPPTMLSNGPVKMVLKNGVFMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASSAANINNISHFQAVAQAHYNTAPPPASSHSPISDQVKCAILAQQLKARKDTDLLQQALAHGSNSVTNSNMFSQQGPNLINGQGNYYGFNPNHNHHLSQNGTPNGSMEDDEPKLIIDEDDEDEEDEEDIEEIPDDHEEEEEEEENYLALNACEDKLQAHHLPTIVEEVKLKSTEPQESAKKVAESILEQAIKAKQNVNPFAAKTLDPTLITPNNNTMKSMIAQAPAVGKFLKEVASSSFKDESQDLASVSELVDNATNNAVSFNSYFRPSDVANHMEPSDEDGLVASSASESNNSGAEDTVSTEKPKKKSAYSLAPNRVHCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVSEPIPLPKSVEEIERMQREREEEERKRKAEEQRERLEKEQMEKQKFEQEQLQKQAFLKQLAAAQFQQQFVQKPETNPVSSSELPFKCHLCESSFSERLHCLEHIKSLHAQEFALLLSKGAIESETDCAQMTSNEEDERQRTAEDTAKGGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEICFRKFTLKHSMLRHMKKHNGLHINGMQSNSDNLVNGNSGSDYSDDEQTPNSLPTPALPIPSTSINALLMGSKFQELLHKANEWRNGNLNALRDGKENHSDETNAPQSSDLIGNLLGISDQGILNKLMSSPDEAAKFLGVDK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00260066;
90% Identity: iTF_01398893;
80% Identity: -