Basic Information

Insect: Tachina grossa
Gene Symbol: -
Assembly: GCA_949987645.1
Location: OX465277.1:148472324-148483107[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.79 1e+02 5.2 1.5 1 23 262 285 262 285 0.88

2 25 6.7e-06 0.00086 21.1 0.3 1 23 291 314 291 314 0.97

3 25 0.02 2.6 10.2 0.8 2 20 344 362 343 365 0.94

4 25 0.008 1 11.5 0.7 1 23 442 465 442 465 0.97

5 25 0.17 22 7.3 0.8 2 23 473 494 472 494 0.97

6 25 0.0006 0.077 15.0 0.8 3 23 540 560 538 560 0.97

7 25 0.09 12 8.2 0.7 2 20 573 591 572 594 0.94

8 25 0.0004 0.051 15.6 0.8 1 23 673 696 673 696 0.96

9 25 0.0037 0.47 12.5 0.3 1 20 703 722 703 724 0.95

10 25 0.1 13 8.0 0.2 2 23 736 758 735 758 0.94

11 25 0.00043 0.055 15.5 0.4 2 23 773 794 772 794 0.97

12 25 2.6e-07 3.3e-05 25.6 1.8 1 23 800 822 800 822 0.98

13 25 0.067 8.6 8.6 2.8 1 23 973 997 973 997 0.96

14 25 8.4 1.1e+03 2.0 1.3 1 23 1034 1057 1034 1057 0.92

15 25 0.013 1.7 10.8 4.6 1 23 1067 1089 1067 1090 0.95

16 25 0.01 1.3 11.2 3.6 1 23 1097 1119 1097 1119 0.97

17 25 0.022 2.8 10.1 0.1 2 19 1146 1163 1145 1165 0.95

18 25 0.0039 0.51 12.4 4.3 1 23 1219 1242 1219 1242 0.97

19 25 0.018 2.2 10.4 0.3 1 23 1279 1302 1279 1302 0.97

20 25 0.074 9.5 8.4 5.7 1 23 1334 1357 1334 1357 0.96

21 25 7.3e-07 9.3e-05 24.2 0.8 2 23 1388 1409 1387 1409 0.95

22 25 7.7e-06 0.00098 21.0 0.4 1 23 1415 1437 1415 1437 0.99

23 25 7.1e-05 0.0091 17.9 2.4 1 23 1443 1465 1443 1465 0.97

24 25 4.1e-06 0.00052 21.8 2.3 1 23 1471 1493 1471 1493 0.99

25 25 0.058 7.4 8.8 0.4 1 21 1499 1519 1499 1523 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.79	1e+02	5.2	1.5	1	23	262	285	262	285	0.88
2	25	6.7e-06	0.00086	21.1	0.3	1	23	291	314	291	314	0.97
3	25	0.02	2.6	10.2	0.8	2	20	344	362	343	365	0.94
4	25	0.008	1	11.5	0.7	1	23	442	465	442	465	0.97
5	25	0.17	22	7.3	0.8	2	23	473	494	472	494	0.97
6	25	0.0006	0.077	15.0	0.8	3	23	540	560	538	560	0.97
7	25	0.09	12	8.2	0.7	2	20	573	591	572	594	0.94
8	25	0.0004	0.051	15.6	0.8	1	23	673	696	673	696	0.96
9	25	0.0037	0.47	12.5	0.3	1	20	703	722	703	724	0.95
10	25	0.1	13	8.0	0.2	2	23	736	758	735	758	0.94
11	25	0.00043	0.055	15.5	0.4	2	23	773	794	772	794	0.97
12	25	2.6e-07	3.3e-05	25.6	1.8	1	23	800	822	800	822	0.98
13	25	0.067	8.6	8.6	2.8	1	23	973	997	973	997	0.96
14	25	8.4	1.1e+03	2.0	1.3	1	23	1034	1057	1034	1057	0.92
15	25	0.013	1.7	10.8	4.6	1	23	1067	1089	1067	1090	0.95
16	25	0.01	1.3	11.2	3.6	1	23	1097	1119	1097	1119	0.97
17	25	0.022	2.8	10.1	0.1	2	19	1146	1163	1145	1165	0.95
18	25	0.0039	0.51	12.4	4.3	1	23	1219	1242	1219	1242	0.97
19	25	0.018	2.2	10.4	0.3	1	23	1279	1302	1279	1302	0.97
20	25	0.074	9.5	8.4	5.7	1	23	1334	1357	1334	1357	0.96
21	25	7.3e-07	9.3e-05	24.2	0.8	2	23	1388	1409	1387	1409	0.95
22	25	7.7e-06	0.00098	21.0	0.4	1	23	1415	1437	1415	1437	0.99
23	25	7.1e-05	0.0091	17.9	2.4	1	23	1443	1465	1443	1465	0.97
24	25	4.1e-06	0.00052	21.8	2.3	1	23	1471	1493	1471	1493	0.99
25	25	0.058	7.4	8.8	0.4	1	21	1499	1519	1499	1523	0.91

Sequence Information

Coding Sequence: ATGGATAGCGATACAAAGACTGATTGTTTCATAAATGGAGTGCAATATAAATGTCGCACTTGCTTTGATCCTGGACGGACAGTGTACTCCCTTAGAGATGAGTGCTGCATTACGAAAAACTGGTGTGATTTAATAAAGGATGTTGCACAGTTGCAGATAAGTGACGATGATTTACTTCCAAATACCATATGCTGCAAATGCTCAGTTAAACTAAAAAGTTCCTATGATTTTATTCTTCAAGTTCATGAAACGAATGCGAAATATTCTCAGTTTTTAGCCGTTTGTAACGACCCCCTTCAGGACTATGTTCCTCCAACAGGGATAGATAATTTAAATGACTGTTTAGCGGAATCAACAATAGATTTACCATTGAACCAGTATATACCAGAAATAAAGATAGAGGAAGATTTTCCAGATTCATACAAGGTTAATCTAAACAGCATTTCATCTGAGAACATAGAAACAAAATTCGAAAACCAAAGTTTAAGAAGTTCTCGAGATTCTTTAGGGCATAACGAAGATTTCAAGTCAGCATCGGATGAAATAGAAGATGGCAAGAAGTTTCGGAAAACTAGAAAAACTCGTAATTTAGATATTGATCACAATGACAACGATTACAATAATGACTTCAGctCATCATCTAATGAAAGCGATTATATTccattaaagaaattaaaaaaggaaaaagtcaAAAGTGGTAACGATGGCAGTCAAccagtaaaaaggaaaaaaggtCGACAAGCTCCAGACTATTATGATAAAATAGAAAAGATCAACGATCGATTTTTGTGTCTCATATGtcaaaaaacattttccttGAGGAAAGATTGCGGTCGGCACATAGCATCGATACATTTGCGCCGTACCCCATTCCCTTGTGCAATTTGCGGACAAAGTTTTGGTCGAAAGGACAAATTGCAAAGGCACGTCAAACGTATACATTCGGGTGGAGAAATATATCCATCCAATCATAAGGAATGGTTATTTGGAGATCGTTTGTACCATAAACCAACTGCTTGGACTCTTGTGCAATGTAATTTATGCGATTCCAAATTTAAAACGACGAAAGAACTTCGTCAGCATTTACCAGAACACGGTAATTTTGATTCTCTCCATAAATTGGAGTTAAGCAGCGACTTTATTcaacatttgtttggaaatatgATTGAATTAAACATCGTCAAAGAAAGCATTTGTAAAGACATTCGCGATAAACAATGGTTTAAATACTAtactgttttaaataaatactctTATGAAATGTCTATTAGTGATACGGAAAATGAAGATGCAGAAGAAGAAACTGCAGAGCCAGCAAACAAATACAAATGTGATTTGTGTGCGCaggtattttcatttaaataccaagctttttccCATTTAAGGGAGGCTCATAGCGAAGATGAAATTCCTCTGAAGTGTAATCTTTGTAAGCtggaatttatttcaattaatatgTATGAGCAGCATTCCAAAACCCATTGTCGTAATAGGCATAAGGTTTTGCTTTGTGCGCACTGTCCAGCCAAATTTGTTTGGCCGAAAAATATGACAAATCACAATTGCGCTACCAAACTTCAACTCATACCACCGCCACCTACTAAGGAACAAATGGCGTGCAATATATGCGATCGTAAATTTGAGGTCAAGACGAAATTTGAAAAGCATTTAGAAACACATAAAGATGGCAGGCTTGTATCCTCAAAAACTATAATTCGTTGCGGTCTTTGTGCACATTCTTTTGAAAAGCTGCGAAATTTGCGCCAACACATGCCATTGCATGCCGATGGAAAAACTGGCATTGATTTTAAAGGCAGTATATATGTGAAACGTTTTGAACGTTCGAAATCCATTGATTTTGCTTTACTGCAACAGGAAATACAAAATGCTTATAGAAAATCTCAAATAAGTCGTTTTTATCGAGCTATTGATAGGGATGGAAATGAAATGGATATTTTAGATTCGGATAGCGACGCAGAAGTAGATAATCATAATGAGGCAGTTGTCGATAAGGAATATAGTTGTCAACTGTGCGGTGCTGCTTATAAAAGGCGAAAACTTTTACTAAATCATCAACGCGATAAGCATATCGGCGTACCACTTCCTTTTACTTGTAAAGATTGTACTCAACAATATGTAAGTAATGATTTGTTGCAGCAGCACTTGGTAAGAGATTGTTGGAATGAACACCGACGAATTGCACAGCAATGTGACTATTGTAATGCACGGTTTATATGGCCAAATAATCTACTAAAGCACAAAGAAATTCAGCATAAAAATCAGAAACATCCAAAACCTCAAAGAGCCAGTACACTTAAATGTGAATATTGTGAAAAGGTATTCATATGGCCTAAAGATTTGGTGCGACACCGGAAAACGCACACTGAGGGGAAGAAATTCACATGTCCGCACTGCGATCGTAGATTTCAGCGTAAAGACAATTTGCTGGCTCACATAAGAATACATTGTCCTGATGGCATACCAACGATATCAAATCCGGGCAAAAGTATCGATTACATTCTACCGCATTTAATAAAACCACATGGATGCAAACGCATCAAATGTATGATCTGCTTTTCAGAACACAATCGCGTGCGCGACTTAAGATCTCATTTGCGAACACATCGTTATACAGTTAGTTTCGACAAACGAAAAGAAATTGAAACTTTGGATATTATATCATCTCAACTCTATCCCGATGAACAGCTGCCTTTACCAGAGGAGCTTTTAAAGAAGCGTATTAATGTTGATATTGCAGCGGAAAATAACTTGGAACGCTTTTATtctataacaaatgaaaatggATATGAAGTTTCTTTAGACAGTTCTGAAACGGAAAGTGATTCAGATGATAACGATAATAAaggagaagaagaagaagacgAAGAAGAAGACAACGACAAATCGAAGCGTATTTACAAATGCGATTTGTGTCCTCAGTTAAGTTTTAATCGTAAATATAAACTTTTCGCTCATCACAACAATGAACATACATGGGAGGAAGCTCGACACGTTTGTATACATTGCAATGCTCGATTTCTGTCCTCATACATGCTGCAACTGCATTACAAGGACCAGTGTAAAAATAACAAGAAACGTCATTTTTGCCGCCGCTGTCCGCTGCGTTTTATGTGGAAAAATAATATGAAGGCTCATATCGTAATGGAACATGGTCACGAAATCGATTCAAATCGGGGTCATGAATGCTTTCTTTGCCAAGAAAAATTCTTTCCTCAAAAAGAGCTCAAGCGTCATTTGATCACACATCACTCTGCCGATGCCGAACTTCATTATTGTCTACTTTGTCCGAAAACCTTCTTTAGTGTGGAACATCTCAATGAACATTTGAGTCGTCATCGATTGACTACATCAGACGTCAAGACTGTTGAAAGTATAATACACTCCACATGCTGGCCCAACGGAGAAAAGATGattaaatgcaaaatatgtgAAGCAACGTTTCAAACATTGGCAAATCTAAGAGATCATTTTTCACCAACAAATCCAAAAAACGTGTGTGCCAATCAGCATTCCTTGGTAAATTATTCAGCTACTAACCAAAAGGGATTCGAGCTCCATATGGAACTCGATTCTGAAACAGAAATAGAAGATGATGTTGAACAGAATAAAGGTCATAAAAATTCTTTGTATCCCTATAATTGCTGCATGTGTAGTATGTCGTTTAAAAGAAAATACCAAATCGCTCAACATCAACGATCATTGCATAACTATGAAATGCTAGCTTTAAAGTGTGAACGTTGTATTTTTAGAACGGTCTCTCAGAAAGTATTAGATTATCATAAATCCACGCAGTGTTTCAACGCGGAGAAACAATTCGAATGCGAgcaatgcaaatttaaatttatgtggCCAGAAAATCTTGAGAATCACATTTCCACGCTTCATAGTCCAAAAGAGTGTGCTAAGGCAAGTGATGTTATTTGCATAGCCTCTTCTAATGAGCCCATACCCACCAACAGCAAAAATGATACCAACATTTTTGAATGCATGGACTGCCATCGCCGTTACAATCGTAAAGATCGATACAAAGctcattttaataaattccACAGTAATGAATTGCACTTAATATCTGAAAAGTGCATCTCTCATAGAAGAGTCCGGAAGCAGGCTACCACATCGAAAAtggaaaagaaatttttgtgtgCCTTTTGCGGTCTATCCTTTTCAAACAATTCCAACCTTACGGTACACATGAGAAGACATACGGGAGAGAAACCATTTAAGTGTGATCTGTGTGAAATGGCATTCCCACGTACATCCGATTTGCAAGCCCACCGGCGTACACACACTGGCGAACGACCTTTCAAATGCATTTATTGCGATAAATCATTTTCGCGACAATACAAATTAAATGTACATAAtcgcatacacactggcgaacGTCCTTACGAGTGTTCGTTTTGCCAGAAATCATTTACACAATCGAACGATTTGACACTTCATTTACGACGCCACACGGGTGAAAGGCCTTACATATGTGACATTTGCGGTGAAGGCTTTATATGTGCCACATCTCTCAAACAGCATCGCAATGCTAAAGGACATCAGGAGGTGAAAACGGATTTTAAAGAGTGTGTGCAACAATTGAATCATTACGATTTAAAATTCTAA
Protein Sequence: MDSDTKTDCFINGVQYKCRTCFDPGRTVYSLRDECCITKNWCDLIKDVAQLQISDDDLLPNTICCKCSVKLKSSYDFILQVHETNAKYSQFLAVCNDPLQDYVPPTGIDNLNDCLAESTIDLPLNQYIPEIKIEEDFPDSYKVNLNSISSENIETKFENQSLRSSRDSLGHNEDFKSASDEIEDGKKFRKTRKTRNLDIDHNDNDYNNDFSSSSNESDYIPLKKLKKEKVKSGNDGSQPVKRKKGRQAPDYYDKIEKINDRFLCLICQKTFSLRKDCGRHIASIHLRRTPFPCAICGQSFGRKDKLQRHVKRIHSGGEIYPSNHKEWLFGDRLYHKPTAWTLVQCNLCDSKFKTTKELRQHLPEHGNFDSLHKLELSSDFIQHLFGNMIELNIVKESICKDIRDKQWFKYYTVLNKYSYEMSISDTENEDAEEETAEPANKYKCDLCAQVFSFKYQAFSHLREAHSEDEIPLKCNLCKLEFISINMYEQHSKTHCRNRHKVLLCAHCPAKFVWPKNMTNHNCATKLQLIPPPPTKEQMACNICDRKFEVKTKFEKHLETHKDGRLVSSKTIIRCGLCAHSFEKLRNLRQHMPLHADGKTGIDFKGSIYVKRFERSKSIDFALLQQEIQNAYRKSQISRFYRAIDRDGNEMDILDSDSDAEVDNHNEAVVDKEYSCQLCGAAYKRRKLLLNHQRDKHIGVPLPFTCKDCTQQYVSNDLLQQHLVRDCWNEHRRIAQQCDYCNARFIWPNNLLKHKEIQHKNQKHPKPQRASTLKCEYCEKVFIWPKDLVRHRKTHTEGKKFTCPHCDRRFQRKDNLLAHIRIHCPDGIPTISNPGKSIDYILPHLIKPHGCKRIKCMICFSEHNRVRDLRSHLRTHRYTVSFDKRKEIETLDIISSQLYPDEQLPLPEELLKKRINVDIAAENNLERFYSITNENGYEVSLDSSETESDSDDNDNKGEEEEDEEEDNDKSKRIYKCDLCPQLSFNRKYKLFAHHNNEHTWEEARHVCIHCNARFLSSYMLQLHYKDQCKNNKKRHFCRRCPLRFMWKNNMKAHIVMEHGHEIDSNRGHECFLCQEKFFPQKELKRHLITHHSADAELHYCLLCPKTFFSVEHLNEHLSRHRLTTSDVKTVESIIHSTCWPNGEKMIKCKICEATFQTLANLRDHFSPTNPKNVCANQHSLVNYSATNQKGFELHMELDSETEIEDDVEQNKGHKNSLYPYNCCMCSMSFKRKYQIAQHQRSLHNYEMLALKCERCIFRTVSQKVLDYHKSTQCFNAEKQFECEQCKFKFMWPENLENHISTLHSPKECAKASDVICIASSNEPIPTNSKNDTNIFECMDCHRRYNRKDRYKAHFNKFHSNELHLISEKCISHRRVRKQATTSKMEKKFLCAFCGLSFSNNSNLTVHMRRHTGEKPFKCDLCEMAFPRTSDLQAHRRTHTGERPFKCIYCDKSFSRQYKLNVHNRIHTGERPYECSFCQKSFTQSNDLTLHLRRHTGERPYICDICGEGFICATSLKQHRNAKGHQEVKTDFKECVQQLNHYDLKF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00900821;
90% Identity: iTF_01399687;
80% Identity: -