Basic Information

Insect: Tachina grossa
Gene Symbol: -
Assembly: GCA_949987645.1
Location: OX465275.1:41135620-41159934[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 9.8e-06 0.0013 20.6 1.3 1 23 561 583 561 583 0.97

2 18 0.00019 0.024 16.6 0.5 1 23 589 611 589 611 0.97

3 18 8.4e-05 0.011 17.7 0.6 1 23 617 639 617 639 0.98

4 18 6.3e-06 0.0008 21.2 3.0 1 23 645 667 645 667 0.97

5 18 8.4e-05 0.011 17.7 4.7 1 23 673 695 673 695 0.99

6 18 0.00015 0.019 16.9 5.6 1 23 701 723 701 723 0.97

7 18 7.2e-07 9.2e-05 24.2 4.3 1 23 729 751 729 751 0.98

8 18 2.7e-07 3.4e-05 25.5 2.4 1 23 757 779 757 779 0.97

9 18 0.00016 0.02 16.8 6.7 1 23 785 807 785 807 0.97

10 18 0.00015 0.02 16.9 6.7 1 23 813 835 813 835 0.98

11 18 2.4e-05 0.0031 19.4 4.5 1 23 841 863 841 863 0.98

12 18 1.8e-05 0.0023 19.8 8.1 1 23 869 891 869 891 0.98

13 18 1.4e-05 0.0018 20.2 7.8 1 23 897 919 897 919 0.97

14 18 1.6e-06 0.00021 23.1 7.7 1 23 925 947 925 947 0.98

15 18 0.0005 0.064 15.2 9.5 1 23 953 976 953 976 0.95

16 18 0.00042 0.054 15.5 0.5 1 23 982 1004 982 1004 0.97

17 18 0.00061 0.079 15.0 4.5 1 23 1014 1036 1014 1036 0.98

18 18 2.2e-05 0.0028 19.5 1.6 1 23 1042 1065 1042 1065 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	9.8e-06	0.0013	20.6	1.3	1	23	561	583	561	583	0.97
2	18	0.00019	0.024	16.6	0.5	1	23	589	611	589	611	0.97
3	18	8.4e-05	0.011	17.7	0.6	1	23	617	639	617	639	0.98
4	18	6.3e-06	0.0008	21.2	3.0	1	23	645	667	645	667	0.97
5	18	8.4e-05	0.011	17.7	4.7	1	23	673	695	673	695	0.99
6	18	0.00015	0.019	16.9	5.6	1	23	701	723	701	723	0.97
7	18	7.2e-07	9.2e-05	24.2	4.3	1	23	729	751	729	751	0.98
8	18	2.7e-07	3.4e-05	25.5	2.4	1	23	757	779	757	779	0.97
9	18	0.00016	0.02	16.8	6.7	1	23	785	807	785	807	0.97
10	18	0.00015	0.02	16.9	6.7	1	23	813	835	813	835	0.98
11	18	2.4e-05	0.0031	19.4	4.5	1	23	841	863	841	863	0.98
12	18	1.8e-05	0.0023	19.8	8.1	1	23	869	891	869	891	0.98
13	18	1.4e-05	0.0018	20.2	7.8	1	23	897	919	897	919	0.97
14	18	1.6e-06	0.00021	23.1	7.7	1	23	925	947	925	947	0.98
15	18	0.0005	0.064	15.2	9.5	1	23	953	976	953	976	0.95
16	18	0.00042	0.054	15.5	0.5	1	23	982	1004	982	1004	0.97
17	18	0.00061	0.079	15.0	4.5	1	23	1014	1036	1014	1036	0.98
18	18	2.2e-05	0.0028	19.5	1.6	1	23	1042	1065	1042	1065	0.96

Sequence Information

Coding Sequence: atgaataCTGAGAATGCAATTGCTAATGGATCAACTCCTGCTGAATCAACAACAGCGGTAACATTAtcaaacacaacaacaactatTGCTAATGCGCTTACAACACCAAATGGCTATGATCCACAGCAACAAAATCGTCATTCGCctttacaacagcaacaacaacaaacccAATTAAATGAGTCGCGCGATATTTTAACTGTCGTTCAAGCACAAAATCAAACATCTCAACAATTTATGTCGACTCGAAATGTAAATAGTGTTGGTGATGTTTCTGGCATTAATCACATAGCACTCACACCTTTAACAGTATCCCCAAAAACGCCAACAACGTCGTCTACAAGTATTGTTGAACATAAAAATGTTATTACGCAGCTATCAATAATAACTTCAACGAATTCCACAACAACACAATCAACAACTGAGGATGTCAATTCTAGTCCAGTTGCTGTACCTATGAGCACCACGTTAGTGTCTGCACATGAACCACTTTTGCTAAATCATCATCAGCACGATCAAAATGTACACCAGCATGCAAACCAAGCTTTAGGCACTCCTTTGCTGCTAAATAGTTCTTCTGGGCCTTCGGGAACACTCTTAGCCAATAATTCGCAAAATtTGGGTAAATATTGGGTCGTGACAAACTTGTTTCCGGGAGGGCCTAGTCAAGCGGCTCAATATAACGAAGGTGGCATAACGCATACACAGACATCTATATCAGGAGTGCCTTCATCGACATTAGTGCGTGCTATATCCACAACTGCGGGAAGTACAACAGTGGTAACAAAAACTGAGCCAGTTTGTAGCAGTGCGGGAACGCTGCAAATCCCACAAACACAAATGCTATCGCAGGCGGGTATTGCACACCAATTGCCAAATGGCACCATTATAACAGCGCAACCACAGCAACAGCAGCAAAGACATGTTGCagaacatcaacaacaacagtTGCATGTGCACGATGATAAtcaccaacaacaacagcagcagcaacagcaacaattgAGTCAACAGCAACATATTGCCGTACTACAGTCAACGGATGCCATAAAAGATGAAAAGCCTTTTGCTTCAAATGGCAAAATATCGACACCAAATCAACAAATTATTATGCAGCATATGTCAACAGCAGCATCTTCTGGAAACCCGTCTACCTCCGGAGGTACCACTATTACATTGGGTACTCCTAAAACGGAAATTAAAGACGATGGCAGCGTAGTCATGAGCGGTAAATTGCATCCTGGCATCGAAATGTATAAGGTTAATATCGACGATATATCGCAACTGTTTACCTATCACGAAGTTTTCGGTAAATTACACGGCGATGCTATGAATCATACTTTGGCTTCCGCCCACGGATCATTGCCCCCAACTGCAAACAGCAATATTGCTACAGCTGTTTCAGCAGCAAGTACCAGTACTGCCGAAGTAAACAATTCGACTGGAGGAGTTCCTGTGGTAGCCAATAGCGCCTCTATAACAGAATCCACCAGTAGTACTTCAACCAGTACAGCGGCAAACTTAACCACAGCCATTGCAACAAACTCTACTGCTACTTGCACAACTACCGGTATGCCACCTGGTGGCTTGTTAATGCCTAAAATGGAGGGTGGTATTACTGGTGTAGAACAAAATACTGTCACTTTGGCACCAGATGGTACAGTAGTTTCGACTGGAGAACATGTGTGCGATATATGTGGAAAAATGTTTGCTTTCCGTTATCAATTAATAGTACATCGGCGTTATCACACTGAACGTAAACCATTTAATTGTCAAGTCTGTGGCCAGGGGTTTTTCACTTCTCAGGATCTAACTCGGCATGGCAAGATTCATATTGGTGGACCCATGTTCACCTGTTTAGTgtgttttaatgtttttgcCAATAATGCCTCTTTGGAGCGTCACATGAAGCGACATTCTACGGATAAACCTTTCGCTTGCACAATATGTCAAAAGACTTTTGCTCGCAAGGAGCATTTGGAAAATCATTTTCGTTCACACACTGGTGAGACTCCTTTCCGGTGCCAATATTGCGCTAAAACATTTACACGCAAAGAGCACATGGTAAATCATGTTCGCAAACATACAGGAGAGACACCTCATCGTTGCGAAATCTGCAAGAAATCGTTTACGCGCAAAGAACACTATGTCAATCACTATATGTGGCATACAGGTCAAACTCCACATCAATGTGAAGTGTGTGgtaaaaaatatacacgtaaAGAACATTTGGCAAATCATATGCGTTCGCACACAAACGACACACCGTTTCGTTGTGAAATCTGTGGCAAAAGTTTTAGTCGTAAGGAGCATTTTACTAATCATATATTATGGCATACAGGCGAAACTCCCCACCGTTGTGACTTCTGTTCGAAGACGTTTACACGTAAGGAACATTTGTTGAATCATGTGCGTCAACATACTGGAGAATCACCGCATCGTTGTACATATTGCATGAAAACGTTTACACGCAAGGAACACTTGATCAATCATATACGACAGCATACTGGCGAAACCCCTTTTAAGTGCACTTACTGCACTAAGGCTTTCACCCGAAAAGATCACATGGTCAATCATGTACGCCAGCATACCGGCGAATCGCCACATAAATGTACATACTGTACAAAGACGTTTACACGCAAAGAACATTTAACGAATCATGTACGGCAACATACTGGAGAATCGCCGCATCGTTGCACCTACTGCAAGAAAACCTTTACACGCAAAGAGCATCTAACGAATCATGTGCGTTTGCATACTGGTGATTCGCCGCACAAGTGTGAATACTGTCAGAAAACATTCACACGTAAGGAACATCTCAACAATCATATGCGTCAACATTCTAGTGATAATCCACACTGTTGCAATGTCTGTAACAAACCATTTACGCGCAAAGAACATTTAATAAATCACATGTCACGCTGCCACACCGGTGATCGGCCATTTGCATGTGAAACATGTGGAAAATCTTTTCCACTCAAGGGAAATTTACTTTTCCATCAACGTAGTCATACTAAGGGTCAAGAAATGGAAAGACCATTTTCCTGTGAAAAATGCccaaaaacatttatttgcaaagGACATTTGGTTTCACATATGCGTTCTCACTCTGGCGAGAAGCCACACGCTTGCACTTtgtgtagtaaagcatttgtgGAAAGAGGTAATTTAAAACGCCACATGAAAATGAATCATCCAAATGCTCCAATGCCGCCACCTCCAGTGCCACATCCAGTTATACCAGCCGGGGTATTGCCTCAAATTAAGCAAGAAATAAAACCAGTTATCAGTGAATTAAATTCGCTTCAAACAACAACTCCAACAATGCATACCATACAACAAATAACAGCAGGAGCCTCGGCAAATAATGTGCAACTAACATCGGGTTTAACACCGTTGGTAACATCAACTATAACATCGCATACTACACAGAAACAGGCGACACAGAGCCAAGCTCAAGTACAGCAAGATCCATTGCAACTACAAGTCGCTACAcaccagcagcagcagcagcagcagcagcaacaacaaatgTCAGCCCATCAACAAGTTttacagcagcagcaacaacaacaacaacaacaacaacaacatcaaaatCAGTTACTGCAGTTGTCTATGCAACAGGCAGCGGCTGCATCCGCAGCCCATCAGCAGATACAACAGCATCAGGACCAACACCGCCAACATCATcatcaacagcaacaacaacagcagcagcagcagacacaacaacaagctcatcatCAACAACAAACAGCTTCAAATGTTACTGGCGTTGCAAGTgctcaacaacaacagcagcagcagcaacaacaacaacaacagccatCTCAGCAACAAACTCAAACTCAACAGCAACCACCACAAGTGCCAATCGCTTTAATACAAACCGATCAGGAAGCTTTGGCCCGTGCTACCATGCAACAATTACAGCACATGCCCGCTAATGTTGAACAACACCCGGTTGTTTACTAA
Protein Sequence: MNTENAIANGSTPAESTTAVTLSNTTTTIANALTTPNGYDPQQQNRHSPLQQQQQQTQLNESRDILTVVQAQNQTSQQFMSTRNVNSVGDVSGINHIALTPLTVSPKTPTTSSTSIVEHKNVITQLSIITSTNSTTTQSTTEDVNSSPVAVPMSTTLVSAHEPLLLNHHQHDQNVHQHANQALGTPLLLNSSSGPSGTLLANNSQNLGKYWVVTNLFPGGPSQAAQYNEGGITHTQTSISGVPSSTLVRAISTTAGSTTVVTKTEPVCSSAGTLQIPQTQMLSQAGIAHQLPNGTIITAQPQQQQQRHVAEHQQQQLHVHDDNHQQQQQQQQQQLSQQQHIAVLQSTDAIKDEKPFASNGKISTPNQQIIMQHMSTAASSGNPSTSGGTTITLGTPKTEIKDDGSVVMSGKLHPGIEMYKVNIDDISQLFTYHEVFGKLHGDAMNHTLASAHGSLPPTANSNIATAVSAASTSTAEVNNSTGGVPVVANSASITESTSSTSTSTAANLTTAIATNSTATCTTTGMPPGGLLMPKMEGGITGVEQNTVTLAPDGTVVSTGEHVCDICGKMFAFRYQLIVHRRYHTERKPFNCQVCGQGFFTSQDLTRHGKIHIGGPMFTCLVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLENHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHYVNHYMWHTGQTPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCMKTFTRKEHLINHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGESPHRCTYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQEMERPFSCEKCPKTFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPNAPMPPPPVPHPVIPAGVLPQIKQEIKPVISELNSLQTTTPTMHTIQQITAGASANNVQLTSGLTPLVTSTITSHTTQKQATQSQAQVQQDPLQLQVATHQQQQQQQQQQQMSAHQQVLQQQQQQQQQQQQHQNQLLQLSMQQAAAASAAHQQIQQHQDQHRQHHHQQQQQQQQQQTQQQAHHQQQTASNVTGVASAQQQQQQQQQQQQQPSQQQTQTQQQPPQVPIALIQTDQEALARATMQQLQHMPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01236968;
90% Identity: iTF_01397716;
80% Identity: -