Basic Information

Insect: Tachina fera
Gene Symbol: -
Assembly: GCA_905220375.1
Location: LR999965.1:33241695-33263206[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 9.5e-06 0.0011 20.6 1.3 1 23 549 571 549 571 0.97

2 18 0.00018 0.021 16.6 0.5 1 23 577 599 577 599 0.97

3 18 8.1e-05 0.0094 17.7 0.6 1 23 605 627 605 627 0.98

4 18 6.1e-06 0.0007 21.2 3.0 1 23 633 655 633 655 0.97

5 18 8.1e-05 0.0093 17.7 4.7 1 23 661 683 661 683 0.99

6 18 0.00014 0.016 16.9 5.6 1 23 689 711 689 711 0.97

7 18 7e-07 8e-05 24.2 4.3 1 23 717 739 717 739 0.98

8 18 2.6e-07 3e-05 25.6 2.4 1 23 745 767 745 767 0.97

9 18 0.00015 0.017 16.9 6.7 1 23 773 795 773 795 0.97

10 18 0.00025 0.029 16.2 6.6 1 23 801 823 801 823 0.98

11 18 2.4e-05 0.0027 19.4 4.5 1 23 829 851 829 851 0.98

12 18 8.8e-05 0.01 17.6 8.3 1 23 857 879 857 879 0.98

13 18 1.3e-05 0.0015 20.2 7.8 1 23 885 907 885 907 0.97

14 18 7.7e-06 0.00089 20.9 7.2 1 23 913 935 913 935 0.98

15 18 0.00049 0.056 15.3 9.5 1 23 941 964 941 964 0.95

16 18 0.00041 0.047 15.5 0.5 1 23 970 992 970 992 0.97

17 18 0.00059 0.068 15.0 4.5 1 23 1002 1024 1002 1024 0.98

18 18 2.1e-05 0.0025 19.5 1.6 1 23 1030 1053 1030 1053 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	9.5e-06	0.0011	20.6	1.3	1	23	549	571	549	571	0.97
2	18	0.00018	0.021	16.6	0.5	1	23	577	599	577	599	0.97
3	18	8.1e-05	0.0094	17.7	0.6	1	23	605	627	605	627	0.98
4	18	6.1e-06	0.0007	21.2	3.0	1	23	633	655	633	655	0.97
5	18	8.1e-05	0.0093	17.7	4.7	1	23	661	683	661	683	0.99
6	18	0.00014	0.016	16.9	5.6	1	23	689	711	689	711	0.97
7	18	7e-07	8e-05	24.2	4.3	1	23	717	739	717	739	0.98
8	18	2.6e-07	3e-05	25.6	2.4	1	23	745	767	745	767	0.97
9	18	0.00015	0.017	16.9	6.7	1	23	773	795	773	795	0.97
10	18	0.00025	0.029	16.2	6.6	1	23	801	823	801	823	0.98
11	18	2.4e-05	0.0027	19.4	4.5	1	23	829	851	829	851	0.98
12	18	8.8e-05	0.01	17.6	8.3	1	23	857	879	857	879	0.98
13	18	1.3e-05	0.0015	20.2	7.8	1	23	885	907	885	907	0.97
14	18	7.7e-06	0.00089	20.9	7.2	1	23	913	935	913	935	0.98
15	18	0.00049	0.056	15.3	9.5	1	23	941	964	941	964	0.95
16	18	0.00041	0.047	15.5	0.5	1	23	970	992	970	992	0.97
17	18	0.00059	0.068	15.0	4.5	1	23	1002	1024	1002	1024	0.98
18	18	2.1e-05	0.0025	19.5	1.6	1	23	1030	1053	1030	1053	0.96

Sequence Information

Coding Sequence: atgaatacTGAGAATGCAATTGCTAATGCAACAACTCCTGGTGAGTCAACAACAGCGGTAACATTatcaaacacaacaacaactgTTACAGCGCTTACAACACCAAATGGCTATGATCCACAGCAACAAAATCGTCATTCGCCtttacaacagcaacagcaacaacaacaacaacaacaaactcaATTAAATGagTCGCGAGATATTTTAACTGTCGTTCAACCACAAAACCAAACATCTCAACAATATATGTCGACTCGAAATGTAAATAGTGTTGGTGATGTATCCCCAAAGACAATAACAACGTCGTCTACAAGTATTGTTGAAGATAAAAATGTCATTACGCAACTATCAACAATAACTTCAACCAATTCCATAACAACACAATCAACAATTGAGGATGTTAATTCTAGTCCAGTTGCTGTACCCATGAGCACCACGTTAGTGTCTGCACATGAACCACTTTTGCTAAATCATCATCAGCACCATCAAAATGTACATCAGCATGCAAATCAAGCTTTAGGCACTCCTTTGCTGCTAAATAGTTCTTCTGGCCCTTCGGGAACACTCTTAGCCAATAATTCGCAAAATttGGGTAAATATTGGGTCGTGACAAACTTGTTTCCGGGAGCGACTAGTCAAGCTGCTCAATATAACGAGGGTGGCATAACGCATACACAGACATCTATATCAGGAGTGCCTTCATCGACATTAGTGCGTGCCATATCCACAACTGCGGGAAGTACAACAGTGGTAACAAAAACTGAGCCAGTTTGTAGCAGTGCGGGAACGCTGCAAATACCACAAACACAGATGCTATCGCAGGCGGGTATTGCACACCAATTGCCAAATGGCACCATTATAACAGCGCAAccacagcaacagcagcaaagACATGTTGcagaacatcaacaacaacagctgcATGTGCATGACGATAATcaccaacaacagcaacagcaacaattgAGTCAACAGCAACATATTGCCGTACTACAGTCAACGGATGCCATAAAAGATGAAAAACCTTTTGCTTCAAATGGCAAAATATCGACACCAAATCAACAAATTATTATGCAGCATATGTCAACAGCAGCAACTTCTGGAAACCCGTCTACCTCTGGAGGTACCACTATTACATTGGGTACTCCTAAAACGGAAATTAAAGACGATGGCAGCGTAGTGATGGGCGGGAAAATGCATCCTGGCATTGAAATGTATAAAGTTAATATCGACGATATATCGCAACTGTTTACCTATCACGAAGTTTTCGGTAAACTACACGGCGATGTTATGAATCATCCCTTGGCTTCCGCCCACGGATCATTGCCACCAACTGCAAACAGCAATATTGCTACAGCTGTTTCAGCAGCAAGTACCAGTACTGCCGAAGTAAACAATTCAACTGGAGGAGTTCCTGTGGTAGCCAATAGCGCCTCTATAACAGAATCCACCAGTGCTAGTTCAACCAGTACAGCGGCAAACTTAACCACAGCCATTGCTACAAACTCTACTGCTACTTGCACAACTACCGGTATGCCACCTGGTGGCTTGTTAATGCCCAAAATGGAGGGTGGTATTACTGGTGTAGAACAAAATACTGTCACTTTGGCACCAGATGGCACAGTAGTTTCGACTGGAGAACATGTGTGCGATATATGTGGAAAAATGTTTGCTTTCCGCTATCAATTAATAGTACATCGGCGTTATCACACTGAACGTAAACCATTTAATTGTCAAGTCTGTGGCCAGGGGTTTTTCACTTCTCAAGACCTTACTCGGCATGGCAAGATTCATATTGGTGGACCCATGTTCACCTGTTTAGtgtgttttaatgtttttgccAATAATGCCTCTTTGGAGCGTCACATGAAGCGACATTCTACGGATAAACCTTTTGCCTGTACAATATGTCAAAAGACTTTTGCTCGCAAAGAGCATTTAGAAAATCATTTTCGTTCACACACTGGCGAGACTCCATTCCGGTGCCAATATTGCGCTAAAACATTTACACGCAAAGAGCACATGGTAAATCATGTTCGGAAACATACGGGAGAGACACCGCATCGTTGTGAAATCTGCAAGAAATCGTTTACACGCAAGGAGCACTATGTCAATCACTATATGTGGCATACAGGTCAAACTCCACATCAATGTGAAGTGTGTGGCAAAAAATATACACGTAAAGAACATTTGGCAAACCATATGCGTTCGCACACAAACGACACACCGTTTCGTTGTGAAATCTGTGGCAAAAGTTTTAGTCGTAAGGAGCATTTTACTAATCATATATTATGGCATACAGgcGAAACTCCCCACCGTTGTGACTTCTGTTCGAAGACTTTTACACGTAAGGAACATTTATTGAATCATGTGCGTCAACATACTGGTGAATCACCGCATCGTTGTACATATTGCATGAAAACGTTTACGCGCAAGGAACATTTGGTCAATCATATACGACAGCATACTGGCGAGACACCTTTTAAGTGCACTTACTGCACTAAGGCTTTCACTCGAAAAGATCACATGGTGAATCATGTACGCCAGCATACTGGTGAATCGCCACATAAATGTACATTCTGTACAAAGACGTTTACACGCAAAGAACATTTAACGAATCATGTACGGCAACATACTGGAGATTCGCCGCATCGTTGCACCTATTGCAAGAAAACCTTTACACGTAAAGAGCATCTAACGAATCATGTGCGTTTGCATACTGGTGATTCGCCGCACAAGTGTGAATATTGTCAGAAAACATTCACACGTAAGGAACATCTCGACAACCATATGCGTCAACATTCTAGTGATAATCCACACTGTTGCAATGTCTGTAACAAACCATTTACGCGCAAAGAACATTTAATAAATCACATGTCGCGCTGTCACACCGGCGATCGGCCATTTGCATGTGAAACATGTGGAAAATCTTTTCCACTCAAGGGAAACTTACTTTTCCATCAACGTAGTCATACTAAGGGTCAAGAAATGGAAAGACCATTTTCATGTGAAAAATGTccaaaaacatttatttgcaaagGACATTTGGTTTCTCATATGCGTTCTCACTCCGGCGAGAAGCCACACGCTTGCACTTtgtgtagtaaagcatttgtgGAAAGAGGTAATTTAAAACGCCACATGAAAATGAATCATCCAAATGCTCCAATGCCACCACCTCCAGTGCCACATCCAGTTATACCAGCCGGGGTATTGCCTCAaattaaacaagaaacaaaaccaGTTATCAGTGAATTaaATTCGCTTCAAACTACAGCTCCAACGATGCATACTATACAACAAATAACAGCAGTAGCTTCGGCAAATAATGTGCAACTAACAACGGGTTTAACACCGTTGGTAACATCAACTATAACATCCCATACCACACAGAAACAGGCGACACAGAACCAAGCTCAAGTACAGCAAGATCCATTGCAACAACAAGTCGCTACacaccagcagcagcagcaacaacagatGTCAGGCCATCAGCAAGTTttacagcagcagcagcaacaacaacaacaacaacagcaacaacatcaaaatcagtTGCTGCAGTTGTCTATGCAACAGGCAGCGGCTGCATCCGCAGCCCATCAGCAGATACAACAGCATCAGGACCAACACCGccaacatcatcatcaacagcaacaacagcagcagcagcaacagacACAACAACAAGCTCATCACCAACAACAAACAGCTTCAAATGTTACTGGCGTTGCAAGtgctcaacaacaacaacaacagcatcagcagcaacaacaacaacaacaacaacagccatCTCAGCAACAAACTCAAACTCAGCAGCAACCACCACAAGTGCCAATCGCTTTAATACAAACCGATCAGGAAGCTTTGGCCCGTGCTACCATGCAGCAATTACAGCACATGCCCACTAATGTTGAACAACACCCAGTTGTTtactaa
Protein Sequence: MNTENAIANATTPGESTTAVTLSNTTTTVTALTTPNGYDPQQQNRHSPLQQQQQQQQQQQTQLNESRDILTVVQPQNQTSQQYMSTRNVNSVGDVSPKTITTSSTSIVEDKNVITQLSTITSTNSITTQSTIEDVNSSPVAVPMSTTLVSAHEPLLLNHHQHHQNVHQHANQALGTPLLLNSSSGPSGTLLANNSQNLGKYWVVTNLFPGATSQAAQYNEGGITHTQTSISGVPSSTLVRAISTTAGSTTVVTKTEPVCSSAGTLQIPQTQMLSQAGIAHQLPNGTIITAQPQQQQQRHVAEHQQQQLHVHDDNHQQQQQQQLSQQQHIAVLQSTDAIKDEKPFASNGKISTPNQQIIMQHMSTAATSGNPSTSGGTTITLGTPKTEIKDDGSVVMGGKMHPGIEMYKVNIDDISQLFTYHEVFGKLHGDVMNHPLASAHGSLPPTANSNIATAVSAASTSTAEVNNSTGGVPVVANSASITESTSASSTSTAANLTTAIATNSTATCTTTGMPPGGLLMPKMEGGITGVEQNTVTLAPDGTVVSTGEHVCDICGKMFAFRYQLIVHRRYHTERKPFNCQVCGQGFFTSQDLTRHGKIHIGGPMFTCLVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLENHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHYVNHYMWHTGQTPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCTYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTFCTKTFTRKEHLTNHVRQHTGDSPHRCTYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLDNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQEMERPFSCEKCPKTFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPNAPMPPPPVPHPVIPAGVLPQIKQETKPVISELNSLQTTAPTMHTIQQITAVASANNVQLTTGLTPLVTSTITSHTTQKQATQNQAQVQQDPLQQQVATHQQQQQQQMSGHQQVLQQQQQQQQQQQQQHQNQLLQLSMQQAAAASAAHQQIQQHQDQHRQHHHQQQQQQQQQQTQQQAHHQQQTASNVTGVASAQQQQQQHQQQQQQQQQQPSQQQTQTQQQPPQVPIALIQTDQEALARATMQQLQHMPTNVEQHPVVY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01236968;
90% Identity: iTF_01398744; iTF_01074685;
80% Identity: -