Basic Information

Insect: Tachina fera
Gene Symbol: L
Assembly: GCA_905220375.1
Location: LR999967.1:14470180-14494504[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 9.5e-06 0.0011 20.6 1.7 1 23 254 276 254 276 0.98

2 19 0.8 92 5.1 5.8 1 23 282 304 282 304 0.98

3 19 4.1e-07 4.8e-05 24.9 3.1 1 23 310 332 310 332 0.99

4 19 1.9e-05 0.0022 19.7 0.3 1 23 338 360 338 360 0.98

5 19 6 6.9e+02 2.4 0.8 2 23 425 448 424 448 0.84

6 19 0.24 28 6.8 0.3 2 23 477 499 476 499 0.96

7 19 0.05 5.8 8.9 0.7 1 23 600 622 600 622 0.97

8 19 0.2 23 7.0 2.9 2 23 630 651 629 651 0.96

9 19 0.00062 0.071 14.9 0.3 1 21 659 680 659 683 0.90

10 19 0.2 23 7.0 0.1 1 19 688 706 688 708 0.93

11 19 4.3 4.9e+02 2.9 0.9 1 23 718 741 718 741 0.92

12 19 0.0022 0.25 13.2 1.2 1 23 780 803 780 803 0.98

13 19 8.1 9.3e+02 2.0 0.9 1 23 991 1015 991 1015 0.87

14 19 0.0014 0.17 13.8 4.8 2 23 1024 1046 1023 1046 0.97

15 19 0.21 24 7.0 0.1 1 23 1052 1074 1052 1074 0.92

16 19 0.048 5.6 9.0 0.6 2 23 1082 1103 1082 1103 0.96

17 19 2.6 3e+02 3.5 0.1 2 23 1194 1215 1194 1215 0.93

18 19 0.012 1.3 10.9 0.1 1 23 1225 1247 1225 1247 0.97

19 19 0.018 2.1 10.3 0.7 1 23 1254 1276 1254 1276 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	9.5e-06	0.0011	20.6	1.7	1	23	254	276	254	276	0.98
2	19	0.8	92	5.1	5.8	1	23	282	304	282	304	0.98
3	19	4.1e-07	4.8e-05	24.9	3.1	1	23	310	332	310	332	0.99
4	19	1.9e-05	0.0022	19.7	0.3	1	23	338	360	338	360	0.98
5	19	6	6.9e+02	2.4	0.8	2	23	425	448	424	448	0.84
6	19	0.24	28	6.8	0.3	2	23	477	499	476	499	0.96
7	19	0.05	5.8	8.9	0.7	1	23	600	622	600	622	0.97
8	19	0.2	23	7.0	2.9	2	23	630	651	629	651	0.96
9	19	0.00062	0.071	14.9	0.3	1	21	659	680	659	683	0.90
10	19	0.2	23	7.0	0.1	1	19	688	706	688	708	0.93
11	19	4.3	4.9e+02	2.9	0.9	1	23	718	741	718	741	0.92
12	19	0.0022	0.25	13.2	1.2	1	23	780	803	780	803	0.98
13	19	8.1	9.3e+02	2.0	0.9	1	23	991	1015	991	1015	0.87
14	19	0.0014	0.17	13.8	4.8	2	23	1024	1046	1023	1046	0.97
15	19	0.21	24	7.0	0.1	1	23	1052	1074	1052	1074	0.92
16	19	0.048	5.6	9.0	0.6	2	23	1082	1103	1082	1103	0.96
17	19	2.6	3e+02	3.5	0.1	2	23	1194	1215	1194	1215	0.93
18	19	0.012	1.3	10.9	0.1	1	23	1225	1247	1225	1247	0.97
19	19	0.018	2.1	10.3	0.7	1	23	1254	1276	1254	1276	0.95

Sequence Information

Coding Sequence: ATGATGGCTTTAAAGATGTTATACCGCGGGCCCAGTTCAAGactagaaaatttaattgaaaaaattcaagcCACCAAGGAGATTGTTAATGCcgacatGTACTCCACACATACTTCGTCAAGTTATTCACCTTCCATATCAGATGGTACTATTACACCAAATTCCttacatcatcatcatcatcaccatcacCATCAGCATTTAGCTGTGCCACCACATTTATCATTCCCCAATTCGACTGCTTATGAAGAAGACACAACAACGTTGGCCCTACAGACACAACGTCTGCCAAGACAAAAAACCAATGGCACTTTGGATGGCGCTGAGTATGAAGACAACGCCAATGACAACGACAACGGCAACGACCACAACAACGAAAGAATGCACAAAAATGATGCCAAACTGTGTGAAGACAATGTCACAATTGCTGGCGACAATAAGACAAACGCAAATATTTCAGAAAGTGGTGAAGAACATCATGAGCAACAGCATCAACATCAGCAGCCACATaatcatcaccatcatcatcaaCTAAAACGTCATGGTCGTCATCATCGTTATGCTGAACATGCCTTAAGAATGCCTTCAAAATTACGCAAAATCGATAGGGATTCAACGGTTGGTGGCAATGGAGTCAGTGCCGCCGGTGTTGCTGCTAATGCTGATGGTGTTGGTGTAACAGCAAATGCAGTCAAGTTTGATAAGTTGACAGGAGATGGCATTAAAAGTGGTAATAATGCTGCTAGTGCCGACGGATCCTATCAATGTCAATTCTGTGATAAATCATTTCCGCGTCTTGGTTATTTGAAAAAACATGAACAGAGTCACGCTGAGCATTTACCATTCAAATGTGATTACTGTGCACGCCTGTTCAAACACAAGCGTTCGCGTGACCGCCATACGAAATTGCATACAGGCGATCGTCGTTATCGCTGTCCGCATTGCGAGGCGGCATTTTCAAGGAGTGATCACTTGAAGATTCACATGAAAACGCACGACAACCAAAAACCATTCCAATGTACTATTTGCAATCGTGGCTACAATACTGCTGCGGCACTAACGTCCCACATGCAGAATCACAAAAAGCAGGCAGCTCTTTTAGCTGCCGGTGGCAATCCTCAAGCCCTCAATTATAGTCCGCGTTCCACCGGCTCGGCTTCTAGCAATGGCAGCTTACAGAAAAGACGTTATGGGTTGGCAGCAGCAGCCGAACAAAGTCCCAATCGTCTTGAGTATTCCAAAAGAGGTCGTTCGTCTTCATCAAATATGCTCAAGTGCACGTTTTGCTCAAAATCTGATTTCACTGCAGTGGAACAGCTTAATACTCATCTGCAGACTCAACACGAAAAAGAACTGGCACATTCTATGACACCACCCTCCTCAGCAAACCACCATCAAGCGTTAGAAAATCACAATGCATTCCAGTTATCATGTGAATATTGTACTATGAAATTTCTTAATATTGCTGCCATGTTTCAGCATATGCGTTCGGCTCATTTGGATCGTTTGACCAGTCCCAATTCTTACTTTGAACATTTCAATCGTTTGGCGGCCTCGGGTACATTTAGTCCACGCCTGTTGACGGGACCACCACTAAGAAGTGCGGCCAGTGCagaggaaaatataattaaagaagaaaacaatttatCAAGTCCCAAGTCAATAGAGGCAGCGAATCGCCAAAGTGAAGATGAACCTACTGATCTGAGTCAAAACAATCGCAGATCAATGACTCCAGCAAATACTCCCCAAACCTCTCCGCAGGAGTGCTTGCCGGCCAATGAAAAGCCTGGTCTATTCTTCTGCAATCAATGCAATGCCGGCTTGCCCGACTTCGAATCCTTTCGCAATCATTTGAAAACCCATATTGTCCAAGGGCTTAATTTGGTGTGCCACCACTGCGGTATGCTTTTGAGGGAACATTCGGAATATGAAAGACATGTGATATCACATTTTCTCATTACCAATTCGGAATACAATTGCTCGGGAAATTGCCAAAAATCTTTTGCAAAGCCGGAGGAATTGCAAAAACATCTCGTGGATCAGCATGCCATAACAATGTTTAAGTGCAGCCTGTGCAGCGAAATGTTCGAATCGAAAGTAGCCATACAAGTACATTTTGCTTGTACACATTCCGCGGAGACTAAAATATTTCGCTGTTCGGCCTGCATGGATGTGTTTAGAAGCGAAAACGATTTTAATATGCACGTCAAAACGCGCCATCAAGCTGTTAATAATAATGCGGCGCCCGTTAACTCTTTGCAGTGTATGTTTTGTCGCACAATATGTTCCTCGGACCTGGAGATGCAATTCCACTTGGCCGCGCATGCCCGACAATTTCGTTGTCCCTCTTGCCCGGAAACTTTCCATGTTGAATTTCTGCTCGATCGTCATATGCAAACACAGCATGGTGGTTTAGAGCGCCCACCACCACCGCCACCACCAcatcctcctcctcctcctccagCCGCTGCTGCCCAGCAAACTATTGCCGAGGAACACACATCTCCCGTAGCCGTGCCAAATGCTATATCACCCATGAACTCTTTGTATGTGAATGCTCTGTTTGGCAAAACGCCTTTAATGCCTTTGGCCCcacaaaataataacaacagtATTTTAGACTACAACATGGCCTTTGCCAGCCACATCAATAAGGGTCTATTTCCCAATGCCAATCCCAACAAGTTCTACAATCCTTTACAAATTGATACAAACGCCATGAAACATTCAGCCTTGATGTACGGTTTATCGCAAAGATATTTCGATACCAATCGCACGGTCATGGAAATGtatcaacagcaacagcagcagcaccaacagcaacagcaacaacaacaccatCACCCCCACGACAACAGCAGTAAAGCTTCAGCAAATTATTTCATAAGTCCCAAACAACCAGTAGCCGTAGTACACGACTCCCACCACCCAAGAGATGTGCCCACCTCCCCCCTAAACAATACCGGCTTCAATTGTGGCATTTGCGAGCGCAATGATTTTCGCACCGAATCCGAAGTCCACTCTCATCGCAAAATTGTGCACAATCTAAAGACCGGAGTCAGTCTGAAATGCGCCTATTGCTCGGGCAATTTTAAATCACGCAGTGAACTCGAACATCATATGAAAACCTGTCACAATTCCACCGGTAAGCACAAGTGTTTGATATGTGATGAAATCTTTCCCTCGCCCGCTATACTGGCCGAACATAAGCTACAACACTCTAAGGTGGGACAGTCGGGAAGATGTTCACATTGCTCCAAAGCACTGGCAGATGTTAGTGCCTTCAAAGTGCATTTGAGCGAGCACAATACGGAAGGTCAAATGCCAGTACAGTGCATATGCTGTCGCCAGTCATTACATTCGGAATTTGAGATTGGGCTGCATGCAAAattccaTGTTATCAACCCCACTGTGCAGGAGAACGTGTGTGCTCTTTGCTTAGAACCCATCACCCATTCAGCCACTGAGGCCAAAGTTTGCGAAAAATGCTGCCGCAAACACAATCTCAATACAAAGTTCAAGCCACGCGAACACTTTGAGCGTCCTGCCATCGAATTGAAGCAGTACATTGAAAATCGCTGTAATCTGTGCAAAATGATTTTGCCGTATGCCCAAAAGCTACAAGAACACTTGGTCGAACATACCTTTGCCGGCTGTGAGGAGCGTGGCTTCAACTGTTACATATGTTCGGCCGTTTTTACAGCTCCTACGGGTCTGCTCAACCACATGCTAGAGCATGGCACTAATGCTAAGCCCTACGATTGCAATCTGTGTccagaaaagttttattttcgcGCTGAGTTGGATCATCATCTGATTGATCATGAGGTGCGAGCAGCAGCACCGCAAGCAATAAAAAGCGAGCAGGAGCTATcaacaaaaaaagaagagaCTTTGAATAGCATGAAAGCGGAGAAAGCTTCAGCAGGTTTAAACGCCGTAAAGCAGGAGGTAATGGAACATGATCATAGTGCCAACAATGCTGAAGAGGATGAGTACATTGAAGTGGAAAAGGTACatgaaaataacaacaataacaacaacaacaccagcaACAACATGGGCAGTCAATTGAATGGTGATACAGTGGCGCATAAAATCGAACACACTAGAAATGAGTCTAATGAACAAACCAGAGATGAAAAAGCATAA
Protein Sequence: MMALKMLYRGPSSRLENLIEKIQATKEIVNADMYSTHTSSSYSPSISDGTITPNSLHHHHHHHHHQHLAVPPHLSFPNSTAYEEDTTTLALQTQRLPRQKTNGTLDGAEYEDNANDNDNGNDHNNERMHKNDAKLCEDNVTIAGDNKTNANISESGEEHHEQQHQHQQPHNHHHHHQLKRHGRHHRYAEHALRMPSKLRKIDRDSTVGGNGVSAAGVAANADGVGVTANAVKFDKLTGDGIKSGNNAASADGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAALLAAGGNPQALNYSPRSTGSASSNGSLQKRRYGLAAAAEQSPNRLEYSKRGRSSSSNMLKCTFCSKSDFTAVEQLNTHLQTQHEKELAHSMTPPSSANHHQALENHNAFQLSCEYCTMKFLNIAAMFQHMRSAHLDRLTSPNSYFEHFNRLAASGTFSPRLLTGPPLRSAASAEENIIKEENNLSSPKSIEAANRQSEDEPTDLSQNNRRSMTPANTPQTSPQECLPANEKPGLFFCNQCNAGLPDFESFRNHLKTHIVQGLNLVCHHCGMLLREHSEYERHVISHFLITNSEYNCSGNCQKSFAKPEELQKHLVDQHAITMFKCSLCSEMFESKVAIQVHFACTHSAETKIFRCSACMDVFRSENDFNMHVKTRHQAVNNNAAPVNSLQCMFCRTICSSDLEMQFHLAAHARQFRCPSCPETFHVEFLLDRHMQTQHGGLERPPPPPPPHPPPPPPAAAAQQTIAEEHTSPVAVPNAISPMNSLYVNALFGKTPLMPLAPQNNNNSILDYNMAFASHINKGLFPNANPNKFYNPLQIDTNAMKHSALMYGLSQRYFDTNRTVMEMYQQQQQQHQQQQQQQHHHPHDNSSKASANYFISPKQPVAVVHDSHHPRDVPTSPLNNTGFNCGICERNDFRTESEVHSHRKIVHNLKTGVSLKCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGRCSHCSKALADVSAFKVHLSEHNTEGQMPVQCICCRQSLHSEFEIGLHAKFHVINPTVQENVCALCLEPITHSATEAKVCEKCCRKHNLNTKFKPREHFERPAIELKQYIENRCNLCKMILPYAQKLQEHLVEHTFAGCEERGFNCYICSAVFTAPTGLLNHMLEHGTNAKPYDCNLCPEKFYFRAELDHHLIDHEVRAAAPQAIKSEQELSTKKEETLNSMKAEKASAGLNAVKQEVMEHDHSANNAEEDEYIEVEKVHENNNNNNNNTSNNMGSQLNGDTVAHKIEHTRNESNEQTRDEKA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01237143;
90% Identity: iTF_01399883;
80% Identity: -