Basic Information

Insect: Syrista parreyssii
Gene Symbol: -
Assembly: GCA_030142615.1
Location: JARQTG010000056.1:76507-80721[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.046 3 8.4 2.3 1 23 340 362 340 362 0.97

2 19 0.063 4.1 8.0 1.8 2 23 397 418 396 418 0.95

3 19 0.00035 0.022 15.1 2.0 1 23 495 517 495 517 0.96

4 19 0.0074 0.48 10.9 0.7 2 23 521 542 520 542 0.96

5 19 3.4e-05 0.0022 18.3 2.2 2 23 608 629 607 629 0.97

6 19 0.0037 0.24 11.9 6.6 1 23 634 656 634 656 0.97

7 19 0.00068 0.044 14.2 0.8 1 21 662 682 662 686 0.92

8 19 0.0063 0.4 11.2 3.1 1 23 754 776 754 776 0.97

9 19 0.00028 0.018 15.4 5.1 1 23 834 856 834 856 0.97

10 19 0.00032 0.021 15.2 0.7 1 20 861 880 861 882 0.94

11 19 0.0011 0.071 13.5 0.3 2 23 893 914 893 914 0.97

12 19 5.7e-05 0.0037 17.6 0.7 2 23 953 974 952 974 0.97

13 19 3e-05 0.0019 18.5 1.6 1 23 979 1001 979 1001 0.95

14 19 0.00013 0.0081 16.5 3.9 1 23 1007 1029 1007 1029 0.98

15 19 5.3e-06 0.00034 20.8 0.4 1 23 1045 1067 1045 1067 0.95

16 19 4.3e-07 2.8e-05 24.3 0.6 1 23 1073 1095 1073 1095 0.99

17 19 4.7e-05 0.003 17.9 0.2 1 23 1101 1123 1101 1123 0.97

18 19 0.00017 0.011 16.1 4.1 1 23 1129 1151 1129 1151 0.96

19 19 0.012 0.79 10.2 0.4 1 20 1157 1176 1157 1178 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.046	3	8.4	2.3	1	23	340	362	340	362	0.97
2	19	0.063	4.1	8.0	1.8	2	23	397	418	396	418	0.95
3	19	0.00035	0.022	15.1	2.0	1	23	495	517	495	517	0.96
4	19	0.0074	0.48	10.9	0.7	2	23	521	542	520	542	0.96
5	19	3.4e-05	0.0022	18.3	2.2	2	23	608	629	607	629	0.97
6	19	0.0037	0.24	11.9	6.6	1	23	634	656	634	656	0.97
7	19	0.00068	0.044	14.2	0.8	1	21	662	682	662	686	0.92
8	19	0.0063	0.4	11.2	3.1	1	23	754	776	754	776	0.97
9	19	0.00028	0.018	15.4	5.1	1	23	834	856	834	856	0.97
10	19	0.00032	0.021	15.2	0.7	1	20	861	880	861	882	0.94
11	19	0.0011	0.071	13.5	0.3	2	23	893	914	893	914	0.97
12	19	5.7e-05	0.0037	17.6	0.7	2	23	953	974	952	974	0.97
13	19	3e-05	0.0019	18.5	1.6	1	23	979	1001	979	1001	0.95
14	19	0.00013	0.0081	16.5	3.9	1	23	1007	1029	1007	1029	0.98
15	19	5.3e-06	0.00034	20.8	0.4	1	23	1045	1067	1045	1067	0.95
16	19	4.3e-07	2.8e-05	24.3	0.6	1	23	1073	1095	1073	1095	0.99
17	19	4.7e-05	0.003	17.9	0.2	1	23	1101	1123	1101	1123	0.97
18	19	0.00017	0.011	16.1	4.1	1	23	1129	1151	1129	1151	0.96
19	19	0.012	0.79	10.2	0.4	1	20	1157	1176	1157	1178	0.89

Sequence Information

Coding Sequence: ATGGACGCCGTTGAGGTAAATACGTCGGAACCACCTGAAAATGAGGAAGGTATGGTCTCCGACGTGGAGATATGTCGCGTGTGTCTCCTTGGAAATTTGGTTATGCGGGACCTCTTCCAGGAGAATGATGTCGCCTCCTTATCCGCCAAGGCCATGAGCTTCGCCAGCGTTAAGATGTTACCAGGAGATGGTCTACCTTCACAAGTATGCTGTGTCTGTGCACAAAAGTTGGAGTCTGCATATGAATTCAAATTACAAGTTGAACAAGCTGACGGAGTCTTGCGGGAGAGATATGACTCGCTTAACATCAAGGAGGAGCTCTTCTTTAATGAAGTAGAAGTTCAAGTCGATGGTCGTTTTCAAACTGCTACTGAATCTTTAGATGAGGAGATTGATGATGAAAAGAGAACTTTATTAAAGGATCATATGGCTCTTTTACAAGTGGAGAAGCTTGCAGAGGAAGAAACGGCATTGGAAGAAGAACAGGGAGACGTGCAAGAACTTCAAGAGGAGGTTGACCAGGAGGCCATTCAAGAAGACCACCAGGTCATTGATGAAGATATGATAGAGCAAAATGTAGATGAGGTAGAGGAAATAACAAACACTCTGGAAGCTCATGAACAAATCAAAGACGAGGGTACGGTTGTAGTGGATACCATAGCTGTGGAAGAACATGATTACATTGTGCAACAGGATTACACTTTACAATCTGATCGAGAATATACTGCGCAAGAGGCTCCATCTGAAAATCAGGACTCTGAACAGTTCATGGAACTCCTGAATGAAGAAGACATTCCCAAGGATGATATCAACGAAGAAGAGCAATGTGATACAATGAAAGCAGAGTGTCCGTCCGAACGTGGTTTATCGCAAACAGAAACGCGAAGGAGTAAACGAAGGTCATTAAGAAGAGCAGCTATAGCTGATCGAGCTTCCGACGAGGAAAACTACTTCGAGAATCTCAACCTCAGCTCCAGGTTGAAACGTGCTCAGGCTGACAAAAGTgagaaagtatttttcatgtgTTACTTGTGCGACAAGCAATTCTTATCAAAAGGCGTTCTCAAGGAACACATGCACTCTCACGAAGAAGTTAGAAGAGCCTTATCCTTGAAGAAGACGCCTGAGAAGCCACGGAGAGGTAGCACAGGTACAGCGAAGCCACCGCCGTCAGGTAAACGCGCCAACAAGTGTCCCCATTGTGGTAAAGAATATCTTTATGTGATTTCTTTCAATAAGCACCTGAAGCAACACGAGAAAGATAAGGTGCATACCAAGAAGGAACACATGCCGCTGGAAGTTTCCTTCGAAGAGGATGAGAATAGTCTAAACTTTTCTAATTGCAATCGTGCACCCAGTTCTAATTCGGGCGACGATAGAGGCATGGGGGAGGACGAGGAATATTTGGAGGATGCTAATGAGAACGAGGATGAAAATCAGGAAGacagaagaaagagaaagaggaagaagcacATACAATCCTATTCGTGTGACAAGTGCCCTGAGAAGTTTTACACGAAACGTGGTTTACGTAAACATAACATTAAACATATTCCATTGACGTGCAGTGTATGCAATGAAGAATACGACTCTTTGGAGAAGCTTAGGAACCATAGAACAAAGCATGTGATGGAAGGTGTTTTGTCTGAACAAGATTTGAAGGAAGATGTGCAGGAGATTGTTGAAAAAGAGgttgaagaagaggatgaagatgatatCGAAGACGATATCGATGATGAGATAGATAATGAAGAACAGTTTTCAGATACCCAAGGAAAGGAGGTGCATAGGAAGAGAAGATGGAATGAAACAAAAGATTTGAAGTGTCCAAACTGTCCAATGACCTATTCccataaaaaatctttatcgaGACACTTAGAAACACATGAGGGTACCAAGTATGCATGCAAGATGTGTTGTCAACAGTTCACCAGGAAGGACCATCTTCGTAGGCATATGGAACAGCATGGTAGAGTCAAGTCCTTCAAGTGCACGCAGtgtaataaaacatttggCAATGAATTGACACTTCGCAACCATCTCATAGCTACCAATCACAAAACCTTTGTGCATGGTCAGGAATATGATcctaataaaagaataaaaagagtgGCTGCAAAGGCTGcgcaaaaaattattgacaagATCAAAACAGAGGATGATCTTgaggatgacgaggatgaggatgatatCAATGATGACTTTGGCAATCATGGTGATGACTACGGACCAACAAAGAGACATAATTACAGAAAGGACTTCGAATGCGCCACCTGTAGTAGAAAATGTGGCTCTAAACAATCCTTAACAAAACACATGGAGCAACACGTCAAGGatgaaaaagcagaaaaagcagaaaagttagagaagatgaagaaggatAAGAAAGATTTACAAAAGAATTGCAGCAGTAATCTTGGTCTTGGAATAGGCGACTTCGACATAGACGACGATGAGAATTCAGACTTCGAGAGCGGTTTGGAGTGGCCAATAGACAATCACGAGTGTACAacctgtaaaaagaaatatagcaCAAAGAAGTCCCTCCTGCGACACCAGCTTCTTCACGAGGAGCCAAACTTCGAGTGCGATATATGTAACGTGAAGTTCTACCGCAAAGACAAGCTAAAAGCCCACTACGACAAATGCTCAGAGAAGAATCCTGACCAGGTCAGGAAGTGCAACATTTGTGGTGATAGCTTCGAAAGTAATGAACTCCTACGAGAACACAGAGCCAAGCACGTCACTGAAGGTATCCTTACAGAAGAAGATCTCAGAGACATAGAACCCAGGCCAGAGGATCGCAAAAAGGGCGAGAAGATTGTTCGCAAACGAAGAACAGACATAGTAGGCTTAGAGTGTACCGAGTGCAACAAGCAGTACACATCCCGGAAGGGTCTTCTACGTCATCTTCAAGTACACGAGGGTAAGAAGTATCTCTGTGACATATGCCCTAAGAAATTCTACAGGCGAGAACATCTCAAAATTCATGTGGCTAAACACAACATGATAAAACCATACAAGTGCACGCGTTGCACGAAACGCTTCACCAAGGAGGAGCAGCTTACAAATCATTTGACGAAGCACGACCGTAACTTCAAGAAGAGCAAGGATACAGACAGTTCGAAGAGGTTCCTCTGCGAGATCTGCTCCAAGAGTTTCACCCAGTCGACGACGTTGATTGCTCATCTAAGGGCGCACAACGGTATAAAGCCCTACGTCTGCGAAGTCTGCTCCAGGCCTTTCACCACCAATGCGTACCTGAAAATGCATATGAGAACGCATACCCAGGAACGTCCTTACATATGCCAGTACTGCTCACGCGCCTTTGCCAGAGCTGATACCTTGGCCAATCATCTAACCTCTCATACAGGTGAGGCCAAGTATCACTGCAAATACTGTCCTAAGAATTTCAGACGCCTGAAGTCTCTCAAGGAACATGTTTTCATACACACGGGTCAACGACCTTATGCCTGTCCCACCTGCGACAGGAGATTTAATAACAACGGTAGCCGGTACGCTCATAGCAAAAGGTGTAAGCAGAACCTCCTGCAAAATCAAAACCGTAATGAGAACTTGGAGCAGGTACAGTTACAACCCAGGATACACCAGACCATTGGACAAGCCCACATAGTGAAGCCTCAAAGTGTTAAAACTATAACAATAACTAGACCGGCAGATTCAGTAACTGCTCAACAGGTGATGCAGCACCAGGAGATCCTGATGCCTTTGATCTTACCACTAACGGTGACGCTGACGGACGTTGGCGAAGAAGTGATCCTCCCAGAGGGTACAAAGATATTTACTACCTCGTAA
Protein Sequence: MDAVEVNTSEPPENEEGMVSDVEICRVCLLGNLVMRDLFQENDVASLSAKAMSFASVKMLPGDGLPSQVCCVCAQKLESAYEFKLQVEQADGVLRERYDSLNIKEELFFNEVEVQVDGRFQTATESLDEEIDDEKRTLLKDHMALLQVEKLAEEETALEEEQGDVQELQEEVDQEAIQEDHQVIDEDMIEQNVDEVEEITNTLEAHEQIKDEGTVVVDTIAVEEHDYIVQQDYTLQSDREYTAQEAPSENQDSEQFMELLNEEDIPKDDINEEEQCDTMKAECPSERGLSQTETRRSKRRSLRRAAIADRASDEENYFENLNLSSRLKRAQADKSEKVFFMCYLCDKQFLSKGVLKEHMHSHEEVRRALSLKKTPEKPRRGSTGTAKPPPSGKRANKCPHCGKEYLYVISFNKHLKQHEKDKVHTKKEHMPLEVSFEEDENSLNFSNCNRAPSSNSGDDRGMGEDEEYLEDANENEDENQEDRRKRKRKKHIQSYSCDKCPEKFYTKRGLRKHNIKHIPLTCSVCNEEYDSLEKLRNHRTKHVMEGVLSEQDLKEDVQEIVEKEVEEEDEDDIEDDIDDEIDNEEQFSDTQGKEVHRKRRWNETKDLKCPNCPMTYSHKKSLSRHLETHEGTKYACKMCCQQFTRKDHLRRHMEQHGRVKSFKCTQCNKTFGNELTLRNHLIATNHKTFVHGQEYDPNKRIKRVAAKAAQKIIDKIKTEDDLEDDEDEDDINDDFGNHGDDYGPTKRHNYRKDFECATCSRKCGSKQSLTKHMEQHVKDEKAEKAEKLEKMKKDKKDLQKNCSSNLGLGIGDFDIDDDENSDFESGLEWPIDNHECTTCKKKYSTKKSLLRHQLLHEEPNFECDICNVKFYRKDKLKAHYDKCSEKNPDQVRKCNICGDSFESNELLREHRAKHVTEGILTEEDLRDIEPRPEDRKKGEKIVRKRRTDIVGLECTECNKQYTSRKGLLRHLQVHEGKKYLCDICPKKFYRREHLKIHVAKHNMIKPYKCTRCTKRFTKEEQLTNHLTKHDRNFKKSKDTDSSKRFLCEICSKSFTQSTTLIAHLRAHNGIKPYVCEVCSRPFTTNAYLKMHMRTHTQERPYICQYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNLLQNQNRNENLEQVQLQPRIHQTIGQAHIVKPQSVKTITITRPADSVTAQQVMQHQEILMPLILPLTVTLTDVGEEVILPEGTKIFTTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01199571;
90% Identity: iTF_00297733;
80% Identity: -