Spar000114.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Syrista parreyssii
Gene Symbol
gprs
Assembly
GCA_030142615.1
Location
JARQTG010000005.1:366480-370191[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4e-09 8.8e-07 29.0 0.0 9 45 35 72 28 89 0.85
2 2 4.4e-11 9.5e-09 35.3 0.0 47 106 123 181 107 184 0.84

Sequence Information

Coding Sequence
ATGCCGGAAGCTTCGGGTTCAGGAGTCGAGGAACCAGATTATTCGACCTTCGAGAACAAAACTGGCCTGGCCGAGGACATGAAGTTCTTGGCGAGTATGCCGGAGCTCTGTGACGTCACTTTCCTCGTAGGAGATACCCGCGAGCCCGTCTGCGCCGTCAAGGCAGTCCTAGCTGCCAGAAGCAgggtgtttcataAGATGCTGTATCAAGCGCCGAGTCCGCAACGAAAAAAAGAGCCGCCGCCGCGCGAGAACAAGCTGCGACTTTTCTTGAAGAGAAGCTCTGAGCCACTTTTGAATCTTCAGAACGCGGCGCAACAGCGGTCAGGGTTCACGCAGCAGCTGGCCCCCATACAAGAGCCACAGTCCAATCAGCATCATACATTGATCATTGAAGAATTCGAGCCCGATGTATTTCGTCAGCTGATCGAGTATATTCATACAGGATGCGTCACATTGCAGCCCAGAACATTGTTGGGAGTCATGAACGCTGCCGATTACTATGGACTGGACGAATTGAGACGAGCCTGTGCTGGCTTCGTGCAGTGCTGCATAACCGTGGACACAGTCTGTGCTCTACTAGCATCAGCCGAACGATACATTCAGTACAAATGCACAAAATCTTTAGTGCAAAAGGTATTGGAATTCGTGGACGAGCATGGTAACGAGGTACTAAATTTGGGCTCATTTACATTGCTACCGCAACACGTGGTAAGATTGATCCTTGCCCGAGAGGAATTGAGAGCGgatgaatttacgaaatttcagGCTGCCCTAATGTGGAGCAAGAAATATTGTGACAGCAATCAAAATACTCCTCTGAAGGATGTGATTGGAAATTTTCTGGAATACATACAGTTCCATAAAATTCCAGCTAATGTTCTCATGCGCGAAGTCTATCCTCTGGCATTGGTACCTAACAACATGATAATGAACGCTTTGGCCTATCAGGCAGACCCTTCCAGTGTTGACCCCGGGAAGCTCTCCCCCCACCGAGTGAGACGTCAAGGTCGTAGTATGTCTGTACAATCGTCCTTGGATCCATATGGTAGCAACACGACCTTAAGCTCCAGCGGAAGTGACGCCGGATCCGATCAGAAACAACACTCAGGTAGCAACTAA
Protein Sequence
MPEASGSGVEEPDYSTFENKTGLAEDMKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYQAPSPQRKKEPPPRENKLRLFLKRSSEPLLNLQNAAQQRSGFTQQLAPIQEPQSNQHHTLIIEEFEPDVFRQLIEYIHTGCVTLQPRTLLGVMNAADYYGLDELRRACAGFVQCCITVDTVCALLASAERYIQYKCTKSLVQKVLEFVDEHGNEVLNLGSFTLLPQHVVRLILAREELRADEFTKFQAALMWSKKYCDSNQNTPLKDVIGNFLEYIQFHKIPANVLMREVYPLALVPNNMIMNALAYQADPSSVDPGKLSPHRVRRQGRSMSVQSSLDPYGSNTTLSSSGSDAGSDQKQHSGSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00060481; iTF_00132097; iTF_00131427; iTF_00798716; iTF_00132735; iTF_01057793; iTF_01299426; iTF_00263651; iTF_01497607; iTF_01056200; iTF_01102953; iTF_00652971; iTF_01129483; iTF_00051148; iTF_00262796; iTF_00266604; iTF_01057036; iTF_00397454; iTF_01101486; iTF_00459919; iTF_00343312; iTF_01100752; iTF_00721393; iTF_01103697; iTF_00439637; iTF_00265878; iTF_00398230; iTF_01207510; iTF_00829657; iTF_01306649; iTF_00058843; iTF_00629243; iTF_00414462; iTF_00059583; iTF_01379423; iTF_00058080; iTF_00243434; iTF_00894982; iTF_00242395; iTF_01509012; iTF_00828923; iTF_01273922; iTF_01273223; iTF_00438226; iTF_00048100; iTF_00168647; iTF_00047370; iTF_00438890; iTF_00046379; iTF_00351293; iTF_01512932; iTF_01513588; iTF_00993701; iTF_01272303; iTF_00883190; iTF_00770502; iTF_00297699; iTF_01473316; iTF_00293863; iTF_00293096; iTF_00296936; iTF_00254473; iTF_01475594; iTF_01130955; iTF_00255214; iTF_00252207; iTF_01199537; iTF_00253714; iTF_01474834; iTF_01198803; iTF_00252952; iTF_01474073; iTF_00360327; iTF_01524144; iTF_00728775; iTF_00905543; iTF_01303591; iTF_00996488; iTF_01560586; iTF_00938155; iTF_00452056; iTF_01004463; iTF_00381232; iTF_00378995; iTF_00379768; iTF_00378170; iTF_00316924; iTF_00317576; iTF_01003680; iTF_01005375; iTF_00938890; iTF_00939749; iTF_01120331; iTF_01489547; iTF_01488835; iTF_00159244; iTF_00200941; iTF_00174447; iTF_00175865; iTF_00175196; iTF_00738497; iTF_01389605; iTF_01392166; iTF_01390477; iTF_01392919; iTF_01393690; iTF_01394496; iTF_00201831; iTF_00773937; iTF_01414353; iTF_01411673; iTF_01413503; iTF_01412480; iTF_01493713; iTF_01493007; iTF_00719570; iTF_00718753; iTF_00850002; iTF_00090558; iTF_01251200; iTF_01200338; iTF_01232500; iTF_01233109; iTF_00460950; iTF_01364790; iTF_00841227; iTF_00761079; iTF_00756792; iTF_01538106; iTF_01048347; iTF_01049068; iTF_00183389; iTF_00370336; iTF_01454304; iTF_00244411; iTF_00424022;
90% Identity
iTF_01254932;
80% Identity
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