Pimp005189.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Prenolepis imparis
Gene Symbol
gprs
Assembly
GCA_030444845.1
Location
JAUDTA010000002.1:14371854-14375750[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-09 1.2e-06 30.1 0.0 9 45 39 78 32 94 0.83
2 2 4.6e-11 2.8e-08 35.3 0.0 47 106 127 185 111 188 0.84

Sequence Information

Coding Sequence
ATGGGCCCAATGCCAGAGGCTTCAGGATCAGGAGTAGCCGATGAATCGGATTACTCGACTTTCGAGAATAAAACCGGCCTGGCCGAAGACATGAAGTTCTTGGCGAGTATGCCGGAACTCTGTGACGTGACATTCCTCGTCGGTGATACCAGAGAGCCCGTTTGCGCTGTGAAGGCTGTGCTTGCGGCCAGAAGCAGAGTCTttcataaaatgttatatcaaACTCCGAGTCCGCAACGCAAAAAAGAACCGCCGGCACGAGAAAACAAGATTCGACTTTTCCTCAAGCGTAGCTCCGAGCCGTTGTTGAATTTGCAGAACGCAGCACAACAGCGGTCAGGGTTCACGCAGCAACTGGCCCCCATCCAAGAGCCGCAATCAAATCAGCATCATACGCTGATTATCGAGGAATTCGAGCCCGATGTCTTCCGGCAGCTGATCGAATACATTCACACGGGATGTGTGACATTACAGCCTAGGACTTTGCTTGGTGTTATGAATGCCGCCGATTATTACGGATTGGACGAGCTTAGACGAGCCTGTGCTGGTTTCGTTCAATGCTGTATAACCGTCGATACGGTCTGCGCTTTGTTAGCATCAGCAGAGCGTTATATTCAGTATAAATGCACGAAATCTTTGGTACAAAAGGTACTGGAGTTTGTCGATGAACACGGCAACGAAGTATTGAATCTGGGATCGTTCACTTTACTGCCGCAACACGTTGTCCGATTAATACTTGCCAGAGAAGAACTACGAGCGGATGAATTTACGAAATTTCAAGCGGCGTTAATGTggagtaaaaaatattgcgacaGCAATCAAAATACACCATTGAAAGACGTGATAGGTAACTTTATCGAGTATATCCAGTTTCACAAGATCCCGGCTACTGTATTGATGCAAGAGGTGAACCCGTTGGGATTAGTACCGCCGGAAATCATCATGAACGCATTGGCTTATCAGGCAGACCCAACCAGTATTGACCCCAGGAAACTCTCCCCCCACAGAGTGAGAAGACAGGGTCGCAGTATGTCGGTCCAGTCGTCGCTGGATCCGTACGGCAGCAACACGACCTTGAGCTCGAGCGGCTCCGACGCCGGATCGGATCAGAAACAGCACTCTGGTAGCAACTAA
Protein Sequence
MGPMPEASGSGVADESDYSTFENKTGLAEDMKFLASMPELCDVTFLVGDTREPVCAVKAVLAARSRVFHKMLYQTPSPQRKKEPPARENKIRLFLKRSSEPLLNLQNAAQQRSGFTQQLAPIQEPQSNQHHTLIIEEFEPDVFRQLIEYIHTGCVTLQPRTLLGVMNAADYYGLDELRRACAGFVQCCITVDTVCALLASAERYIQYKCTKSLVQKVLEFVDEHGNEVLNLGSFTLLPQHVVRLILAREELRADEFTKFQAALMWSKKYCDSNQNTPLKDVIGNFIEYIQFHKIPATVLMQEVNPLGLVPPEIIMNALAYQADPTSIDPRKLSPHRVRRQGRSMSVQSSLDPYGSNTTLSSSGSDAGSDQKQHSGSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01423046;
90% Identity
iTF_00264421; iTF_00770502; iTF_00060481; iTF_00297699; iTF_01473316; iTF_01255813; iTF_00293863; iTF_00293096; iTF_00296936; iTF_00254473; iTF_01475594; iTF_00879883; iTF_01130955; iTF_00200941; iTF_00255214; iTF_01395246; iTF_00252207; iTF_00393711; iTF_00773937; iTF_01199537; iTF_00253714; iTF_01474834; iTF_01198803; iTF_00460950; iTF_00252952; iTF_01474073; iTF_01538106; iTF_00048100; iTF_01273922; iTF_00168647; iTF_00728775; iTF_00047370; iTF_00438890; iTF_00046379; iTF_00438226; iTF_00351293; iTF_00280073; iTF_00280679; iTF_00730896; iTF_00729458; iTF_01245343; iTF_01049068; iTF_00718753; iTF_00738497; iTF_00939749; iTF_01389605; iTF_01392166; iTF_01303591; iTF_00938890; iTF_00159244; iTF_01414353; iTF_00719570; iTF_01200338; iTF_01411673; iTF_01393690; iTF_01048347; iTF_01413503; iTF_01394496; iTF_01412480; iTF_00174447; iTF_00175865; iTF_00175196; iTF_01454304; iTF_00869001; iTF_00867569; iTF_01229144; iTF_01169289; iTF_01390477; iTF_00964590; iTF_00963308; iTF_00961941; iTF_00962622; iTF_01261935; iTF_00129123; iTF_00126857; iTF_00128361; iTF_00129874; iTF_00127610; iTF_00126110; iTF_01015973; iTF_00015495; iTF_00181424; iTF_00016148; iTF_01423046; iTF_01421675; iTF_01422348; iTF_01423788; iTF_01354737; iTF_01523506; iTF_00016793; iTF_01520405; iTF_00769809; iTF_00452690; iTF_00265139; iTF_00883190; iTF_00881426; iTF_00306391; iTF_00086433; iTF_01392919; iTF_00756792; iTF_00109947;
80% Identity
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