Spar011252.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Syrista parreyssii
Gene Symbol
PAXBP1
Assembly
GCA_030142615.1
Location
JARQTG010000346.1:728145-740359[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-27 9.9e-24 84.3 2.2 2 272 541 750 540 752 0.93
2 2 0.66 5.7e+03 -3.4 0.0 42 90 1193 1241 1188 1244 0.84

Sequence Information

Coding Sequence
ATGTCGCTCTTCAATAAACCAAAGCGAAATATACGACGGCGACCGTTCaatgacgaggatgaagatAATGAGAACAGGATGGAGACCGAGGACGCACAACCGATCAAATTGAAACCGAAGAAGAAGGATAAGCCAAAACAAACGCTCCTTAGCTTTGGAGAGGAGCTGGAAGAAGCTGATGATGGTGAAGTTTTTAAAGTGAAGAAATCCTCCAGAAGCAAAAAACTGATGAAACAGCTAGATcacgagaggaaaaaaaagaaaggtgaaGAGAAAATGCAAGTGGACTCTGAGCAAGCAAACATGTCCATTAAGCAGGAAAAAGATTTAGAAATAAAGACAGACGATCTAGTAgttaaaattaaaaatacaggACCACTAATCTTAAACGGAAGGGCTGCCCTAGTGGCAGGGAAGGATGACTATACGTCCGAGGAAGAGGATGACGATCCAAATGGTCATAAATTCCGAAGGAATACTGATAGAGCtgatacaatgaaaatacttttagaAAgTGGTTGTATACCAGATGCAGCAATGATTCATGCAGCAAGGAAACGCAGGCAAAAAGCTAGAGAATTGGGAACGgactatatacctatagaagAACAAAGtgAAGATAAAGGAAAGTCAAGGTTAATCCGTGAAGAAGATCATGATAGAAGCGACGACGATGATTCTCAAGATCGAATTGATATGACTGTAAATACAGATGCTcgtgataaagagaaaagaagagaagctTTCCTTGCATCGCAAGCTCAAGATAAACTTTCAGACAATGAGTGTGAGCATAGCATTGATGAGGAAGAATGGGAAGCGCAACAGATTAGAAAAGGCGTAACTGGAGCACAGatTGCAGCCGTTCAACAAGATTCTATTATGCATCAACAATACACGATGGGTATGAGCGTGAATCCAATGATGGGATCAGGATTACCCGTGGATGTATTAATGATGCCTgcgccaccaccaccgccatcTATACATCCACCAGATCCAACGAAGATCGTACCAATTTCTCCGGAGGAAGTTGTCAATAAGATTCGTGGAAGattggACAGTTTGCGCGAGGTACACAGGCGTCATCAACTTGATCAGGAACAATTAGAGCAAGAGTTAGACCAGACTCTTAAGGAATTGGACCAGGGTGAACTGCATGCACCACAGCTTGCACAGCGCTTCAGATATTACCAAGAGTTGCGTGGGTATGTCACTGACTTGGTAGAGTGTCTTGATGAGAAGCTGCCTCTTGTTGTGGGATTGGAGCAGCGCTGGTTAGAACTGCACGGAGAGCGAACAACTGAACTGATGGAGAGGAGACGTCAAGACACGAGAGATCAAGCTGAAGAAATAACAACAGCTGCCAGAGGGCAAACTATGAGAAGAGGTCCAGAGGATGAAGCTCGAATTCGTCGTGCTACAGAAAGAGAAGGCAGAAGGGCTCGTCGCAGAAGAGCCAGAGAACTGACCCCGACGTTACCTAAACACATTGATGGCATGTCCAGCGACGATGAGGTCACCGAACAGCAAAATCTTGCATTTAAACAGACAAAGGAGGACATTGACAACGAGAGTAAAGATATATTCTCTGACGTCGTCGATGACTTCTGTACAGTTAGGGGTATATTATCGAAATTAGAATCCTGGAGGGAAACGGACTTGGATGCATATATGGAAGCATATGTCCCTTTATGTATACCTAAAATAATCTCCCCGATTGTTAGATTGAAACTTGTTACATGGAATCCTATTATGgaAAGCACGGATCTAGAAAGGACGAAGTGGTATAACACGTTATTACTGTATGCATTGGATAATAAGGAAACCGAAGATTCTTTAAAGCGCGATCCCGACGTTAGACTCGTGCCGTTTACGATGGAAAAAATTGTCCTACCGAAACTCacatCTATCGTGGAGAAAGTATGGGATCCAATGTCAACTTCTCAGACTTTACGACTAGTAGGCACTGTGAGCCGTCTCATTAGGGATTATCCAAACTTTAACAATTCCAGTAAACAGTTAGAACTGCTGTTTCATGCTATCTTAGATAAAATCAAAGCAGCTGTTGAGAACGATGTTTTTATACCAATATTTCCAAAACAAGTTTTGGATACAAGGCACCAATTTTTCCAAAGACAGTTTGCAATGGCTGTCAAGTTGCTGCGCAATTTATTAAGTTGGCAAGGACTTCTTGGTGACACTCAACTAAAAAACTTGGCACTTGGATCACTTTTGAACCGATACCTCTTGGCTGGACTAAGAGTCTCATCTCCAACCGATGCTCTTGTAAAAGCAAATATGATAATGAGTACTTTACCACGAGCCTGGCTTCAGGGAGAAACAATTGAACAACTCAGGATGTTTGCCACATTGATTCAACAACTCAGTGAACAATTGGATCAAGCGAATCCGGCTCACAACGTAGCAGAAAATATCTTTGAACCAGGGaaagaatatttgtattcataCAATGCCACTTCAAATTCTGGTGTCCTGTTGCCTATTACAACTGCTTCATCCTGGGGTATTTATGGGACACTGGTGGTCCAGGTCCTGGAGGAAAATGTTGTCGTGATGCAGTTGAGAGATTTACAAATGGATATGCGAAATGGACCGCCTGACGGGCAAAGAGAATTTATAGATGTTGGGAGTCAGGTTGATGAGATGTCAAAGCCATTTAAAGTGACGTACAAAATGGGATTAGTCGAGAACTTCAGTATTGAAGCAGAACCTGTTTGGGCgacaaatattaaaagaagtaTCGTGGGAATTTTACAATTGGATTTAGGCAGTTTAGAGAAGCAGGCAGCATTCCATTCTAAAGAGGTCAATCATTATGGTCAATGTAATATCGAGTATGTAGCCAGTCCTCAAGAggctgatgaaatttttgtaatgaaatcTACTGATCCAAGAACATGCGTTGGGCATCCATTTTGGACATGGAGTAATGTTCCAGTAATGCTGTGCCCCAATAACGATCAAaatccAGTATTAAAATCTAGTGAAAGACTTTATAGGGTGAAGTCAAGTAATGccaaaaatactattttatatattaacgcAACAGGGGGAATATATGTGCAGCCATTTCAAAGTCTCGGTGAGGCACAGTTCCTATTTACACAACAAGTTTTTACTTTGTTATCCACGCACAATCTAAGAGATAAAATATCTACAAGTGAATTATTTACTACAACCCTTCAGCATGTACTTCCGGAAAATGATTTTACCCAAGGAAGAGGATTACACGATAAGGATGATGTATTTGAATCTATAGGAGTGTTGCTGGATAGATTGAGCCAGCGACTTGAAAATCCTGGATTGGATACAGAAATTCacaatttacataatacaACAATTTCTCAACTTCTCTTCTATCTCAGCATGTTGGATCAGGACGATCTACAAGTAgcttacaataaaatatctggTACCAGTTACAAAGAGGAAACCATAAGGAATATGTTCCTCGAAGCGTTACCACAAGTCGGAAGCAAAGAAGCAGCCTTGTTTGTTCAAGATTTAGTTTTAAACAGGAAAGTCTCTGATATAACTGCAATATATCTTTTGACGCATTTACCATTTCACGTAAGAAAACCGGATGTTCAATTGTTAGTAAGTTTGCAAACATTACTCAGTCCTCCTGAAAAAGTATCACCGGAAGTGCACAATACAGGAATTCTTACATACGGCACATTAATTTACAAGACATGCTTGCTGTATTGTCCGTATGAAATGTTGGACGATTACGTGCGACTTTATCTTGACAAATTTacagaaagcAAAGAGTATGAGAAGAAAATGGTTTGGCTTGAGGGACTGTCTAATATACAATTGGGAAAAGTGGTGGAATTTTTGGAACCTATAGCTAGTGGTAGTAATTCAGAATCTCGACACTTGCGTTTCTTAGCTGCCTGGGCATCTTTGCCAACTGCTCCTTTAAGACCAGATGTGATATATCCAGTCTACTGGCCAATCTTAGTCAATCGCACAGAACCTCTAGAAATGCGAATAGTAGCAATGACTTTATTAATTGTCTCAAGTCCTTCGTCAACTAGATTGATATCACTTTATTGGTACATGCAAGGAGAACCAGATCAGcatttgtacaatttcttttacacCACTCTAAAATCTATGGAGCATACGAATTTCCCGTGTTACACGCAGATcGGTGGTATTGCTGCACAATTTACACGTGTACTCAAAAAGCCAGCGAGTAATCAATACATAATGACTGGCAATTATTTACTTGACTATCAAGATACTTTCAGAAACTTTGGTGCTATGTTAcatgcaattattattgccGATCCTCGTACAAACATTCCAACAGTGTCTCATATTACAATAAACAATCACGGTATTGGTACTAACTTGAATCACGTGTCTCTGTATATCAAAGATGATGGAATTTTCACTGGAGTATTAGAACACTTTAAGAATCTTACTCGTGTTAAAGAAGTCTTGCAAAGTTTTAAGTTACCAAAAAGAATAGAGAACCCGTTGCACATGgaaataattgcaaaagtACAACAGAAGGCTGTTCTGTGCATGTACTTCAATCAAACTAATATCGAAAAGGGTTTAAAATCCATATTGTCCATGGTTGAGAACGCATATCATGTATATGAGAATATGGAATTCCACATTAATCAACAACGTATTAACGTACCTCTTACTATGGAATCGGTGCAAGTTACTGATTTGGGTACTAACGTAAAAATTGCTGGTACTGTCACATCATTGTTTTCTATGAGAGGAAATTTTACTCATACCTCAGTTGGTCGTAATAATCACGTTATATTACGtACATCGATTCATGGAACCGAATCAGTTGCCTCTTATAATCCATTTACTGATTTATGGCATGGAGCTGAACGTGAACAGTCTGTACATGGTTATTTTCCTGTCAATGTGACAGTGCGATTTggggataaattatttttatcatacattaCACCCAGTGAATACATTAGAACTGGAATGACAGCACATGTAAGAACTGTGACGTCTATTATCAGTACCAGAAAGAggacaatattgaaaaatatatgtaagacgtgtcaagaaatatatacagtgagGAAACTgccagaaaataaattaaagGATACAAAACTCTTTGATATGGAAATTCCTGAACTGGGTGGGCAGTTGTTCGTAAAGGTATTTGATTGTGAAAGTCAAATATCACACGATGAACTTCTAGGGGATGTGTTATCATCACACCGTAGCAACTATcaAATTTGGCCAGTTATTCGATCTGGAATGGTGGGTACACACTTTGTGGACTATTTCACTTACGTACCTCCAGGAGGAAGCTGTGGATTGGCAGCATATATAGAACCCCACAATTTACATTCACAAGATAGTATTGGAAAACCAACAGAGGTGAAACTCGAATATAGCAAAAATGATCAGTATCACGGATTCTTTCTAACGCGTCAGGAATTAGGGTCTTTGAATGTGCTTCAAAAGTGGAGTGTTGTGATATTGTATGAAACAACAAGTTGGATATCCgacacattaaaaataaaagccagCCGTACAGTACCTGGAGAAAAAGTCATGAAAATTTGCATTAACATTGACAGAGACAGTTTTTGGGAATGGGACTTTTTAAGCACAAAACCAAGCGACCCatcttcaattaaattatacgtcGTATGGGGACCAGCCGATTCAGCTGCAGGAAGATGTACAGGTTCCTCCGTATTATTAAATCTAGTTGGTGAAATTAGTCCCGAGCAATTAATCGAGAGTGCACAGAAGAAATGGCCTTACGAGGAGTGCAAGGAACAATCACGTGGAAAACAATTCACTCCGTACACAGAAGCTTGTTACTTAGCTTCTAGGGAATTGTCAACATTACGAAAATAccaaatatttgtcaaatatgAGAATTTACCTGAAAAGTTGTCAAAGGCCGCCTGGAGGCTGCGTGCTGTTTATGACTTAATGGGAGGAAATAGTAGTGTTGCTTTGAATActgatcaattttttgtaaccGCAATATTTCCAAAGGAATCTAGTTCAGGAGAATTACATCTCAATAAAGATAAAgtggatataaaatataatccatatatcgtcgattattttttaacaagaacAAGGTTGCATAAGTATATGGACAGTCCACTGgttcaaacatttttcagTAGCTGCGTATTAACACCCACCCGTATAAGGACATCATATAATgtgtcaatttcattaaacaaaGTTCAAGAGGTACTGATCCTCGGTGACTGTGAAGAAGACAGTCCAGGTTTTACAATATCTGCTGTAAACAATGCGGATagtgttaatattatttttaatgatgaaattgatagcttgaaaattattcctaACAAGGAAGGTGGTGCCGTTTATAATTATGCACAATATTTACCGTTAGAGCAAAACTTTCAGTTTCAGTCTATGAATCAAAAAAAATTAAGATTGGATACTAGATCTGTAGATCTTATAGTTCctggatttttaatattcctgcACTGGACTCAAGAGCAGGTATTGATCATTTATcccaatattttcaaagaatctgCGTGTGGACTGTGTACCGCTACAAACTCGGACATAGGAGACGTATATATAAAGCTCTAG
Protein Sequence
MSLFNKPKRNIRRRPFNDEDEDNENRMETEDAQPIKLKPKKKDKPKQTLLSFGEELEEADDGEVFKVKKSSRSKKLMKQLDHERKKKKGEEKMQVDSEQANMSIKQEKDLEIKTDDLVVKIKNTGPLILNGRAALVAGKDDYTSEEEDDDPNGHKFRRNTDRADTMKILLESGCIPDAAMIHAARKRRQKARELGTDYIPIEEQSEDKGKSRLIREEDHDRSDDDDSQDRIDMTVNTDARDKEKRREAFLASQAQDKLSDNECEHSIDEEEWEAQQIRKGVTGAQIAAVQQDSIMHQQYTMGMSVNPMMGSGLPVDVLMMPAPPPPPSIHPPDPTKIVPISPEEVVNKIRGRLDSLREVHRRHQLDQEQLEQELDQTLKELDQGELHAPQLAQRFRYYQELRGYVTDLVECLDEKLPLVVGLEQRWLELHGERTTELMERRRQDTRDQAEEITTAARGQTMRRGPEDEARIRRATEREGRRARRRRARELTPTLPKHIDGMSSDDEVTEQQNLAFKQTKEDIDNESKDIFSDVVDDFCTVRGILSKLESWRETDLDAYMEAYVPLCIPKIISPIVRLKLVTWNPIMESTDLERTKWYNTLLLYALDNKETEDSLKRDPDVRLVPFTMEKIVLPKLTSIVEKVWDPMSTSQTLRLVGTVSRLIRDYPNFNNSSKQLELLFHAILDKIKAAVENDVFIPIFPKQVLDTRHQFFQRQFAMAVKLLRNLLSWQGLLGDTQLKNLALGSLLNRYLLAGLRVSSPTDALVKANMIMSTLPRAWLQGETIEQLRMFATLIQQLSEQLDQANPAHNVAENIFEPGKEYLYSYNATSNSGVLLPITTASSWGIYGTLVVQVLEENVVVMQLRDLQMDMRNGPPDGQREFIDVGSQVDEMSKPFKVTYKMGLVENFSIEAEPVWATNIKRSIVGILQLDLGSLEKQAAFHSKEVNHYGQCNIEYVASPQEADEIFVMKSTDPRTCVGHPFWTWSNVPVMLCPNNDQNPVLKSSERLYRVKSSNAKNTILYINATGGIYVQPFQSLGEAQFLFTQQVFTLLSTHNLRDKISTSELFTTTLQHVLPENDFTQGRGLHDKDDVFESIGVLLDRLSQRLENPGLDTEIHNLHNTTISQLLFYLSMLDQDDLQVAYNKISGTSYKEETIRNMFLEALPQVGSKEAALFVQDLVLNRKVSDITAIYLLTHLPFHVRKPDVQLLVSLQTLLSPPEKVSPEVHNTGILTYGTLIYKTCLLYCPYEMLDDYVRLYLDKFTESKEYEKKMVWLEGLSNIQLGKVVEFLEPIASGSNSESRHLRFLAAWASLPTAPLRPDVIYPVYWPILVNRTEPLEMRIVAMTLLIVSSPSSTRLISLYWYMQGEPDQHLYNFFYTTLKSMEHTNFPCYTQIGGIAAQFTRVLKKPASNQYIMTGNYLLDYQDTFRNFGAMLHAIIIADPRTNIPTVSHITINNHGIGTNLNHVSLYIKDDGIFTGVLEHFKNLTRVKEVLQSFKLPKRIENPLHMEIIAKVQQKAVLCMYFNQTNIEKGLKSILSMVENAYHVYENMEFHINQQRINVPLTMESVQVTDLGTNVKIAGTVTSLFSMRGNFTHTSVGRNNHVILRTSIHGTESVASYNPFTDLWHGAEREQSVHGYFPVNVTVRFGDKLFLSYITPSEYIRTGMTAHVRTVTSIISTRKRTILKNICKTCQEIYTVRKLPENKLKDTKLFDMEIPELGGQLFVKVFDCESQISHDELLGDVLSSHRSNYQIWPVIRSGMVGTHFVDYFTYVPPGGSCGLAAYIEPHNLHSQDSIGKPTEVKLEYSKNDQYHGFFLTRQELGSLNVLQKWSVVILYETTSWISDTLKIKASRTVPGEKVMKICINIDRDSFWEWDFLSTKPSDPSSIKLYVVWGPADSAAGRCTGSSVLLNLVGEISPEQLIESAQKKWPYEECKEQSRGKQFTPYTEACYLASRELSTLRKYQIFVKYENLPEKLSKAAWRLRAVYDLMGGNSSVALNTDQFFVTAIFPKESSSGELHLNKDKVDIKYNPYIVDYFLTRTRLHKYMDSPLVQTFFSSCVLTPTRIRTSYNVSISLNKVQEVLILGDCEEDSPGFTISAVNNADSVNIIFNDEIDSLKIIPNKEGGAVYNYAQYLPLEQNFQFQSMNQKKLRLDTRSVDLIVPGFLIFLHWTQEQVLIIYPNIFKESACGLCTATNSDIGDVYIKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00770369;
90% Identity
iTF_00252067;
80% Identity
-