Sumb018932.1
Basic Information
- Insect
- Synergus umbraculus
- Gene Symbol
- dmd-4
- Assembly
- GCA_900474325.1
- Location
- UCOK01018818.1:54449-56616[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.5e-26 3.1e-22 78.7 10.7 1 47 18 64 18 64 0.99 2 3 0.9 7.9e+03 -2.6 1.3 10 22 330 342 329 343 0.85 3 3 1.5 1.3e+04 -3.3 0.3 3 8 369 374 368 376 0.74
Sequence Information
- Coding Sequence
- ATGCTTCGCACAAAGtctaaaaaatcagaaaatgaCAATGGGTCGAAGCAAAGGAAACCAAAGTGTGCAAGATGCAGAAATCATGGATTAATATCATGGTTGAGGGGTCACAAAAGAGAGTGTCGTTATAGAGATTGTTTCTGTGCAAAATGTTCTCTCATTGCTGAACGTCAAAGAGTCATGGCTGCACAGgtTGCTTTGAAAAGACAGCAAGCAGCTGAAGATGCAATCGCTTTGTGTATGGCGAAAGTGACGACGGGTCAGAAAATTAATCGTCTTCCCCCAGGAAAGATATTTGGAATGACAGTAACAGAGCCTGATATTGCGAACAAAAGTAAAGAAGACGTCCCTGCCAACCAAGATTCCACAAACTCATTTGTTGAAAGCAATTCCATAAAGGACGGAAGTGATTCTCTTAAGAATACAGATCGTCCAGCTATTTTTGAAGAGAACAAGACGAGTACTGAAGAGACTAAAATTGACATTGAGAGTGGGAGCAGTggtcatttttcaaaagtgaaggaaaaattaaataagaaaaaagaatgtgGTGTATCGCAAACTTCCGTAGAAACTCTTGTTCGCCTCTTCCCAAACACCAAACTTTCTGTATTGCAATTGGTATTGCAACGATGTGGACAGGATCTTCTGAAGGCCATCGAGTACTTTGCCTCTACAGAAAGAACTTCTGAAATCAGTCCTCGACTTTCTGAAACTTCTGCTTTTCGTCCACCACAAGTTGAACGGATTCCGGAAACATTGACCACTGGTTTTACGGATTCATCAAAGACCTTCACTCTGCCTCCACTTCGTTCAACGAATCTATATGGCGATAGCTACTGCCTCCTCAACGTCATTTCCGAGCCTATGTCTCAAAGCTTCGAAAATTGCTTTCCCTTTGGAAAATCAGCAACTTCCAGAATCGACAGGGAAAGCGTCGCCTTGAATTTGCAGTATAATCATTATTTCGATGCTGGGGTACAGCAGCAGCATCATCAATATCAGCAGTTACGTGAACACGCTCATTCCCAGCTTACAGACTTTCCTCAAAGATCTGGAGTATTGCATCTTCCGCCTTTCGTTCCAAATATTCCTTGCGTTCAACCCAATTGCTTACTTTGCTATAAGTTTGCATAA
- Protein Sequence
- MLRTKSKKSENDNGSKQRKPKCARCRNHGLISWLRGHKRECRYRDCFCAKCSLIAERQRVMAAQVALKRQQAAEDAIALCMAKVTTGQKINRLPPGKIFGMTVTEPDIANKSKEDVPANQDSTNSFVESNSIKDGSDSLKNTDRPAIFEENKTSTEETKIDIESGSSGHFSKVKEKLNKKKECGVSQTSVETLVRLFPNTKLSVLQLVLQRCGQDLLKAIEYFASTERTSEISPRLSETSAFRPPQVERIPETLTTGFTDSSKTFTLPPLRSTNLYGDSYCLLNVISEPMSQSFENCFPFGKSATSRIDRESVALNLQYNHYFDAGVQQQHHQYQQLREHAHSQLTDFPQRSGVLHLPPFVPNIPCVQPNCLLCYKFA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01392001;
- 90% Identity
- iTF_01391134;
- 80% Identity
- -