Sjap011963.1
Basic Information
- Insect
- Synergus japonicus
- Gene Symbol
- dmd-4
- Assembly
- GCA_900474275.1
- Location
- UCOH01012666.1:50320-52533[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.7e-26 2.8e-22 78.7 10.7 1 47 18 64 18 64 0.99 2 3 4 2.4e+04 -4.8 1.2 10 21 330 341 329 342 0.68 3 3 2 1.2e+04 -3.3 0.3 3 8 369 374 368 376 0.74
Sequence Information
- Coding Sequence
- atGCTTCGCACAAAGtctaaaaaatcagaaaatgaCAATGGGTCGAAGCAAAGGAAACCAAAATGTGCAAGATGCAGAAATCATGGATTAATATCATGGTTGAGGGGTCACAAAAGAGAGTGTCGTTATAGAGATTGTTTCTGTGCAAAATGTTCTCTCATTGCTGAACGTCAAAGAGTTATGGCTGCACAGgtTGCTTTGAAAAGACAACAAGCAGCTGAAGATGCAATCGCTTTGTGTATGGCGAAAGTGACGACGGGTCAGAAAATTAATCGTCTTCCCCCAGGAAAGATATTTGGAATGACAGTAACAGAACCTGATATTGCGAACAAAAGTAAAGAAGACGTCCCTGCAAACCAAGATTCCACAAATTCATTTGTTGAAAACAATTCCATAAAGGACGGAAGtgattctcttaaaaatacagATCGTCCAGGTATTTTTGAAGAGAACAAGACGAGTACTGAAGAGACTAAAATTGACATTGAGAGTGGAAGCAGTGGTCATTTTTCAAACGTGagggaaaaattaaataagaaaaaagaatgtaGTGTGTCGCAAACTTCCGTGGAAACTCTTGTTCGCCTCTTCCCAAACACCAAACTTTCTGTATTGCAATTGGTATTGCAACGATGTGGACAGGATCTTCTGAAGGCCATTGAGTACTTTGCATCTACGGAAAGAACTTCTGAGATTGGTCCTCGACTGTCTGAAACTTCTGCTTTTCGTCCACCACAAGTTGAACGGATTCCGGAAACATTGACCACTGGTTTTACGGATTCATCAAAGACATTCACTCTGCCTCCACTTCGTTCAACGAATCTATATGGCGATAGCTACTGCCTCCTCAACGTCATTTCTGAACCTATGTCTCAAAGCTTCGAAAATTGCTTTCCCTTTGGAAAATCAGCAACTTCCAGGATCGACAGGGAAAGCGTCGCCTTGAATTTGCAGTATAATCACTATTTCGATGCTGGGGTACAGCAGCAGCATCATCAATATCAGCAGTTTCGTGAACACGCTCATTCCCAGCTTACAGACTTTCCTCAAAGATCTGGAATATTGCATCTTCCGCCTTTCGTTCCAAATATTCCTTGCGTTCAACCCAATTGCTTACTTTGCTATAAGTTTGCGTAA
- Protein Sequence
- MLRTKSKKSENDNGSKQRKPKCARCRNHGLISWLRGHKRECRYRDCFCAKCSLIAERQRVMAAQVALKRQQAAEDAIALCMAKVTTGQKINRLPPGKIFGMTVTEPDIANKSKEDVPANQDSTNSFVENNSIKDGSDSLKNTDRPGIFEENKTSTEETKIDIESGSSGHFSNVREKLNKKKECSVSQTSVETLVRLFPNTKLSVLQLVLQRCGQDLLKAIEYFASTERTSEIGPRLSETSAFRPPQVERIPETLTTGFTDSSKTFTLPPLRSTNLYGDSYCLLNVISEPMSQSFENCFPFGKSATSRIDRESVALNLQYNHYFDAGVQQQHHQYQQFREHAHSQLTDFPQRSGILHLPPFVPNIPCVQPNCLLCYKFA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01390241; iTF_01393546; iTF_01389451; iTF_01394324; iTF_01392795; iTF_01391134;
- 90% Identity
- iTF_01391134;
- 80% Identity
- -