Basic Information

Insect: Synergus magnus
Gene Symbol: -
Assembly: GCA_032275165.1
Location: JAUESH010000036.1:4353140-4356844[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 8.4 1.1e+03 1.2 0.1 2 15 331 344 330 352 0.87

2 19 0.14 19 6.7 0.2 1 19 360 378 360 378 0.98

3 19 0.0072 0.95 10.8 1.5 2 23 434 456 433 456 0.96

4 19 0.00015 0.02 16.1 0.3 1 23 459 483 459 483 0.91

5 19 1.4 1.8e+02 3.7 0.8 2 23 508 529 507 529 0.82

6 19 0.0021 0.27 12.5 0.4 1 23 537 560 537 560 0.95

7 19 5.1e-05 0.0067 17.6 1.7 1 23 566 590 566 590 0.90

8 19 0.002 0.26 12.6 6.5 1 23 674 696 674 696 0.98

9 19 0.0078 1 10.7 1.2 1 23 703 726 703 726 0.92

10 19 0.00012 0.016 16.4 3.1 1 23 732 754 732 754 0.98

11 19 0.00013 0.017 16.3 0.8 1 23 760 782 760 782 0.97

12 19 0.00069 0.091 14.0 1.2 1 23 788 810 788 810 0.95

13 19 0.11 14 7.2 3.8 1 23 823 845 823 846 0.95

14 19 3.9e-05 0.0051 18.0 1.9 1 23 860 883 860 883 0.96

15 19 0.0006 0.078 14.2 0.3 1 23 891 914 891 914 0.96

16 19 3.4e-06 0.00045 21.3 0.5 1 23 920 942 920 942 0.98

17 19 0.00047 0.062 14.6 4.3 1 23 948 970 948 970 0.98

18 19 3.3e-06 0.00044 21.3 0.8 1 23 976 999 976 999 0.98

19 19 0.073 9.6 7.7 0.2 2 23 1006 1027 1005 1027 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	8.4	1.1e+03	1.2	0.1	2	15	331	344	330	352	0.87
2	19	0.14	19	6.7	0.2	1	19	360	378	360	378	0.98
3	19	0.0072	0.95	10.8	1.5	2	23	434	456	433	456	0.96
4	19	0.00015	0.02	16.1	0.3	1	23	459	483	459	483	0.91
5	19	1.4	1.8e+02	3.7	0.8	2	23	508	529	507	529	0.82
6	19	0.0021	0.27	12.5	0.4	1	23	537	560	537	560	0.95
7	19	5.1e-05	0.0067	17.6	1.7	1	23	566	590	566	590	0.90
8	19	0.002	0.26	12.6	6.5	1	23	674	696	674	696	0.98
9	19	0.0078	1	10.7	1.2	1	23	703	726	703	726	0.92
10	19	0.00012	0.016	16.4	3.1	1	23	732	754	732	754	0.98
11	19	0.00013	0.017	16.3	0.8	1	23	760	782	760	782	0.97
12	19	0.00069	0.091	14.0	1.2	1	23	788	810	788	810	0.95
13	19	0.11	14	7.2	3.8	1	23	823	845	823	846	0.95
14	19	3.9e-05	0.0051	18.0	1.9	1	23	860	883	860	883	0.96
15	19	0.0006	0.078	14.2	0.3	1	23	891	914	891	914	0.96
16	19	3.4e-06	0.00045	21.3	0.5	1	23	920	942	920	942	0.98
17	19	0.00047	0.062	14.6	4.3	1	23	948	970	948	970	0.98
18	19	3.3e-06	0.00044	21.3	0.8	1	23	976	999	976	999	0.98
19	19	0.073	9.6	7.7	0.2	2	23	1006	1027	1005	1027	0.94

Sequence Information

Coding Sequence: ATGGAATTTGTTTTATCAGACAGCAATGAATGCGAAGGAATACTGCATGAAGATTCATCGACTAAAACGCAAGATTCCAAAGTATGTAGATTGTGTGGCATGAATACCACTAAttcagttgaaatttttagtaaagaaGATCCTATTGCACAAAAACTAGATTACATTCTGCCAATAAATattttcaaAGAGGATAATGTATCAGTCATTGTTTGTAAAAACTGTTGCACAAAAATCAATGATCTTAGCGAATTTACGAATCAGTGTTTACAGAATGAACAAAAGCTTTTAGAAGTTGCAACCTTGTTATCTTCTACAGAAAACGAGCCTGTCGAAACAAAGAAAGATGCTGCAAAATTACAGTTGAAACAAACATGTCCACATTTTTATGCGAATTTACTCATTCCGCAGAATAATGAAtcacttaattttcaaaatgaacttCAGCTTTCATTATGCGATGATAACGCCTCAAATttagaattggaaaatattattaacgaagctatttctttgaatctaGAATCGGAGAGCATCTTAAATGACATTACAACTTTGAATTTAGAAACCGATACAatcttaaatgattttaccAACTCAAATCCGAAATGCGATGATATATTAAACGAAGCAACTCCCTTGAATGTAAAAGGgtcaaaatcaatttctgaAGTTTCAGAACCACTTCATGAAATATCAAAACcgatttttgaagaatcaaAAGAAATCTACACAGCATCAAAACCAATTTTAGATAAAGAGCTTGAAGTTCAATGCACGAGAATTGAAAGTCTAAGTAGTGTAAAACTGATTGATTTAGAAATAATGGATGACCTCAACAATGGGGTGAAATTAGAGAATAAGTCGTTTAAGATAAAAAAGCGAAGCCTAAaagtgaagaagaaaaagaaatcaaagttGGGATTTCCCAAATCAAAAAAACAACGTAAAGAGATTATTGACTCttttcaaaatgagaaaaaagacTTGCAATGCTTTTTATgcaatttagaatttatttcacGAGATCAACATCTTTTTCATTTAGAGCAGcataaaaatcaaaacataAAACAATTCACTTGCCagaaatgcaaaatggatcTGAGCACTGAGGATGATTTGTGGCAGCACTGTGAAAATGACTGTCTTCCAGATAAAGTTACAAGTTTAGAGGAAGCTTCTGATTTTAATACAGAAGATAAATTAACTTGTGAGATTTGCCAAGCATTGTTTATTCAAAAGGAGAGATATGACTTTCATATGCAGTTCCATGAAAAGCGAGATTTggatgttttaaaatgttcccaatgcaataaaatattccaaaccGAAACTGTCCTCTGGGAACATCACCAGACTGAGCACAAACGTTTTTCATGTGTTGGatgtgacaaaatatttagaagGAAAGCGAGTTTGGattatcatttgaaaatatcggGTCACTCAAatgttaagaaaaatttagaagaagagaaaatcaaaataacGGATTCGTCTAAGTCAAAACTATTGATAACTTGTGCCAAATGCGGAGCTCGATATCGTCGCCAGGAAAGATACGATTTCCATGTGAAAAGACACgaattaggaaaaataaacCTATTTATCTGCACAGAATGTGAGAAAGAATTCACGAATGAAAACGTTTTATGGGATCATTATCAGTATACGCACAGAAAAACCGAATGTTTCAATTGTTTAACTTGCGGAAAAGTTTTTCCAAAGCagtatcttttaaataaacaccAACTCAAGTACAAACATGAGAGCACAAAAATCGAGGTTGAATCAAAGAGCAAAAATCAATgTTCTCCAGGGGAGAAAAACGGAATGAATTCTCAAACCAAAGATACCGTCCAACCTAAGTTTCTGGACTGCGTTCTTTGCGGAGAAgcagtttcaaattttgatcccGATTCTCTGAATGACGTAGTAACTTGTGCCAAATGTGAGACACCTGGACTCTCTTTACAAGTCGATTCTGATGGTGCCAAAGTACTTTCCCGTCGAGAATATCATTGCAATTTATGCTACAAACATTTCTCGACTAAAGATAGATTAGAGTATCATATAATGCGTCATTCGGAAAATATGGATGAATTTATTTGCAGTAACTGCGGCAAAAAACTCAGTACCGAACAGGCACTTTTCGAGCATCATCTCTTCGTTCATAAAGGAGCAAGACCTCATGTCTGTGAATTATGTGgtaaATCTTACCAGTTTCGAACGAGACTCAGGGAACATATGAGAACGCACAGTGGAGAAAGACCTTTCGCGTGCgaattttgtggccaggaTTTCATGACAAACAACTCTTTACGCTCTCATGTAAAAACCCACCTCGATGATAAGAAATTTCTTTGCCAACTCTGTTCAAAGCTCTTTCGACGTCAGCAGGACCTAAACGAGCACCTGGAACGTCACTGGAAAAACGACAAATCCTTAAACTTATCTAGATTCTTCCACTGCGAAAATTGTTCCGAATTTTTTCCAACTATTCGCGTTTTAAAAACCCATTTAAAAGAGCACCATGGAATTGAAAATGGAGATCTCACTGATCTCCATCCTTGGTTCGAGTGCGAAGACTGTCCAGAGAAATTCAAACACCAAATGTCCCTGAAATCTCATAGAGAAAAAGTCCACAAGGGGAAAACTAAACCGATTTATCGCTGCGATAAATgtgatataatttataaaacggCGAGACTCTTGGCAAGTCACGTAAATAATAATCATGGAGGGGGAAAAAGATACAAGTGTGCCCAATGTGGAAAAGAATATAATCAGTCGAAGTCCTTACAAAATCATATTTTGATTCACACTGGTGAAAAACCATTTAATTGCGAAATTTGTGAGATGACTTTTAGGACCAGGGAGTCTCGAAATCATCATCAGAGAAAACACACTGGGGAAAAACCTTATAAGTGTCCAGGATGCGATAAAACTTTTGCCACTGCTGGACAGAGAAGAGAACATAGAAGGAAAACTCATGAAGATGGAAACGAATTACCTTGTCCTGAATGTGGTAAAATTTGCTTTGGCGAACGCGGAGTTCGTAGTCATTTGAGTATTCACTCAATTGAGAAGCGCAAGATGCTAgctttgaattaa
Protein Sequence: MEFVLSDSNECEGILHEDSSTKTQDSKVCRLCGMNTTNSVEIFSKEDPIAQKLDYILPINIFKEDNVSVIVCKNCCTKINDLSEFTNQCLQNEQKLLEVATLLSSTENEPVETKKDAAKLQLKQTCPHFYANLLIPQNNESLNFQNELQLSLCDDNASNLELENIINEAISLNLESESILNDITTLNLETDTILNDFTNSNPKCDDILNEATPLNVKGSKSISEVSEPLHEISKPIFEESKEIYTASKPILDKELEVQCTRIESLSSVKLIDLEIMDDLNNGVKLENKSFKIKKRSLKVKKKKKSKLGFPKSKKQRKEIIDSFQNEKKDLQCFLCNLEFISRDQHLFHLEQHKNQNIKQFTCQKCKMDLSTEDDLWQHCENDCLPDKVTSLEEASDFNTEDKLTCEICQALFIQKERYDFHMQFHEKRDLDVLKCSQCNKIFQTETVLWEHHQTEHKRFSCVGCDKIFRRKASLDYHLKISGHSNVKKNLEEEKIKITDSSKSKLLITCAKCGARYRRQERYDFHVKRHELGKINLFICTECEKEFTNENVLWDHYQYTHRKTECFNCLTCGKVFPKQYLLNKHQLKYKHESTKIEVESKSKNQCSPGEKNGMNSQTKDTVQPKFLDCVLCGEAVSNFDPDSLNDVVTCAKCETPGLSLQVDSDGAKVLSRREYHCNLCYKHFSTKDRLEYHIMRHSENMDEFICSNCGKKLSTEQALFEHHLFVHKGARPHVCELCGKSYQFRTRLREHMRTHSGERPFACEFCGQDFMTNNSLRSHVKTHLDDKKFLCQLCSKLFRRQQDLNEHLERHWKNDKSLNLSRFFHCENCSEFFPTIRVLKTHLKEHHGIENGDLTDLHPWFECEDCPEKFKHQMSLKSHREKVHKGKTKPIYRCDKCDIIYKTARLLASHVNNNHGGGKRYKCAQCGKEYNQSKSLQNHILIHTGEKPFNCEICEMTFRTRESRNHHQRKHTGEKPYKCPGCDKTFATAGQRREHRRKTHEDGNELPCPECGKICFGERGVRSHLSIHSIEKRKMLALN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01392220;
90% Identity: iTF_01392973; iTF_01391407;
80% Identity: -