Basic Information

Insect: Synergus itoensis
Gene Symbol: -
Assembly: GCA_904066005.1
Location: CAJFCP010000602.1:1-5950[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.15 20 6.7 0.2 1 19 424 442 424 442 0.98

2 19 0.85 1.2e+02 4.3 0.8 2 23 468 489 467 489 0.89

3 19 0.0029 0.39 12.0 0.2 2 23 498 520 497 520 0.95

4 19 0.00037 0.051 14.8 0.3 1 23 523 547 523 547 0.91

5 19 1.1 1.5e+02 3.9 1.8 2 23 572 593 571 593 0.92

6 19 0.0021 0.29 12.5 0.4 1 23 601 624 601 624 0.95

7 19 0.0048 0.66 11.3 2.3 1 23 630 654 630 654 0.90

8 19 0.002 0.28 12.5 6.5 1 23 738 760 738 760 0.98

9 19 0.0079 1.1 10.6 1.2 1 23 767 790 767 790 0.92

10 19 0.00013 0.017 16.3 3.1 1 23 796 818 796 818 0.98

11 19 6.4e-05 0.0087 17.2 1.4 1 23 824 846 824 846 0.99

12 19 0.00071 0.096 14.0 1.2 1 23 852 874 852 874 0.95

13 19 0.11 15 7.1 3.8 1 23 887 909 887 910 0.95

14 19 4e-05 0.0055 17.9 1.9 1 23 924 947 924 947 0.96

15 19 0.00061 0.083 14.1 0.3 1 23 955 978 955 978 0.96

16 19 3.5e-06 0.00047 21.2 0.5 1 23 984 1006 984 1006 0.98

17 19 0.00048 0.065 14.5 4.3 1 23 1012 1034 1012 1034 0.98

18 19 5.5e-06 0.00075 20.6 0.4 1 23 1040 1063 1040 1063 0.98

19 19 0.097 13 7.2 0.2 2 23 1070 1091 1069 1091 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.15	20	6.7	0.2	1	19	424	442	424	442	0.98
2	19	0.85	1.2e+02	4.3	0.8	2	23	468	489	467	489	0.89
3	19	0.0029	0.39	12.0	0.2	2	23	498	520	497	520	0.95
4	19	0.00037	0.051	14.8	0.3	1	23	523	547	523	547	0.91
5	19	1.1	1.5e+02	3.9	1.8	2	23	572	593	571	593	0.92
6	19	0.0021	0.29	12.5	0.4	1	23	601	624	601	624	0.95
7	19	0.0048	0.66	11.3	2.3	1	23	630	654	630	654	0.90
8	19	0.002	0.28	12.5	6.5	1	23	738	760	738	760	0.98
9	19	0.0079	1.1	10.6	1.2	1	23	767	790	767	790	0.92
10	19	0.00013	0.017	16.3	3.1	1	23	796	818	796	818	0.98
11	19	6.4e-05	0.0087	17.2	1.4	1	23	824	846	824	846	0.99
12	19	0.00071	0.096	14.0	1.2	1	23	852	874	852	874	0.95
13	19	0.11	15	7.1	3.8	1	23	887	909	887	910	0.95
14	19	4e-05	0.0055	17.9	1.9	1	23	924	947	924	947	0.96
15	19	0.00061	0.083	14.1	0.3	1	23	955	978	955	978	0.96
16	19	3.5e-06	0.00047	21.2	0.5	1	23	984	1006	984	1006	0.98
17	19	0.00048	0.065	14.5	4.3	1	23	1012	1034	1012	1034	0.98
18	19	5.5e-06	0.00075	20.6	0.4	1	23	1040	1063	1040	1063	0.98
19	19	0.097	13	7.2	0.2	2	23	1070	1091	1069	1091	0.93

Sequence Information

Coding Sequence: GATGAAACTAGAAGGTTTCCAGTAACAGTGGAGGATGCAAACTTTTCCCTCAAGACAAACGACACTTTTGAACATTTTTTATTCAAATTAGAGGAAAATCATCTCGACATTGATTCATTATTAATTAAAATAAAAGTTGAATCATTTAGAGGGAAAAGGCACGTCGAAAAATATGGTACAGAATATCGCATCATGGAATTTGCTTTATCAGACAGCAATGAATGCGAAGGAATACTACATGAAGATTCATCGACTCAATCACAAGATTCCAAAGTATGCAGGTTGTGTGGCATGAATACCACGAATTCAGTTGAAATTTTTAGTAAAAAAGACCCTGTTGCACAAAAACTAGATTACGTTCTACCAATAAATGTTTTCAAAGAAGATAATGTACCAGTCATTGTTTGTAAAAACTGTTGCACAAAAATCAACGTTCTTAGCGAATTTACAAATCAGTGTTTACAGAATGAACAAAAACTTTTAGAAGTTGCAACCTTGTTATCTTCTACAGAAAACGAGCTTGTAGAAACAAAGAAAGATGACGCAAAATTACAGTTGAAACAAACATTTCCACATTTTTATACGAATTTACTCATTCCGCAGAATAATGAATCATTTAATTTTCAAAATGAGCTTCAGTTTTCATTATGCGACGATAACGCCTCAAATTTAGAATTGGAAAATATTATTAACGAAGCTATTTCTTTGAATCTAGAATCGGAGAGCATCTTAAACGACATTACAACTTTGAATTTAGAAACTGATACAATCTTAAATGATTTTTCCAACTCAAATCCGAAATGCGATGATATTTTAAACGAAGCAACCCCTTTGAATGTAAAAGGGTCAAAATCAATTTCTGAAGTTTCAAAACCACTTCATGAAATATCAAAACCAATTTTTGAAGAATCAAAGGAAGTCTGCACAGCATCAAAACCAATTTTAGATCAAGAGCTTGAAATTCAATGCACGAGAATTGAAAGTCTAAGTAGTGTCAAACTGACTGATATAGAGATAATGGATGACCTTAACAATGGGGTCAACTTAGAGAAGAAGTCGATTAAAACGAAAAAGCGAAGCCTAAAAGTGAAGAAGAAAAGGAAATCGAAGTTGGGATTTCTCAAATCAAAAAAACAACGTAAAGAGATTATTGACTCTTTTCAAAATGAGAAAAAAGACTTGCAATGCTTTTTATGCAATTTAGAATTTCTTTCACCAGATCAATATCTTTTTCATTTAGAGCAGCATAAAAATCGAAACATAAAACAATTTACTTGCCAGAAATGCAAAATGGATCTGAGCACTGAAGATGATTTGTGGCAGCACTGTGAAAATTTCTGTCTTCCAGGTAAAATTACAAGTTTAGAGGAAGCTTCTGATTTTATTGCAGAAGATAAATTAACTTGTGAGATTTGCCAAGCAATATTTATTCAGAAGAAGAAATATGACTTTCATATGCAGTTCCATGCAAAAGGAGATTTGGATGTTTTAAAATGTCCCCAATGCAATAAAATATTCCAAACCGAAACCGTCCTTTGGGATCATTATCAAATTGAACACAAACATTTTTCATGTGTTGGATGTGACAGAATATTTAGAAGGAAAGCGAGTTTAGATTATCATTTGAAAATATCGGGTCACTCAAATGTTAAGAAAAATTTAGAAGAGGAGAAAATCAAAATAACGGATTCGTCGAAGTCAAAACTATTGATAACTTGTGCCAAATGCGGAGCTCGATATCGTCACCAGGAAAGATACGAATTCCATGTGAAAAGACATGAATTAGGAAAAATAAACCAATTTATTTGTACAGAATGTGAGAAAGAATTCACGAATGAAAACGTTTTATGGGATCATTATCAGTATACGCACAGAAAAACCGAATGTTTTAATTGTTTAACCTGCGGAAAAGTTTTTCTAAAGCAGTATCTTTTAAATAAACACCAACTTAAGTTCAAACATGAGGGCACAAAAATTGAGGTTGAATCAAAGAGCAATAATCAACGTTTTCCAGTGGAGAAAAATGGAATGAATTCTCAAATCAAAGATGCCGTCCCACCTAAGTTTATGGACTGCGTTATTTGTGGAAAACCAGTTTCAAATTTTGATACCGATTCTTTGAATGACGTAGTAACTTGTGCCAAATGTAAGACACCTGGACTCTCTTTACAAGTCGACTCTGATGGTGCCAAAGTACTTTCCCGTCGAGAATATCATTGCAATTTATGTTACAAACATTTCTCGACTAAAGATAGATTAGAATATCATATAATGCGTCATTCGGAAAATATGGATGAATTTATTTGCAGTAACTGCGGCAAAAAACTCAGTACCGAGCAGGCACTTTTCGAGCATCATCTCTTCGTTCATAAAGGAGCAAGACCTCATGTCTGTGACTTATGTGGTAAATCCTATCAGTTTCGAACGAGACTCAGGGAACATATGAGAACGCACAGTGGAGAAAGACCTTTCACTTGCGAATTTTGCGGCCAGGATTTCATGACGAACAACTCTTTGCGCTCTCATGTAAAAACCCACCTCGACGATAAGAAATTTCTTTGCCAACTCTGTTCAAAGCTCTTTCGACGTCAGCAGGACCTAAATGAACACCTGGAACGTCACTGGAAAAACGACAAATCCCTAAACTTATCTAGATTCTTCCACTGCGAAAATTGTTCCGAATTTTTTCCGACTATTCGCGTTTTAAAAACGCATTTAAAAGAGCACCACGGAATTGAAAATGGAGATCTCACTGATCTCCATCCTTGGTTCGAATGTGAAGACTGTCCAGAGAAATTCAAGCACCAAATGTCCCTGAAATCTCATAGAGAAAAAGTCCACAAGGGGAAAACTAAACCGGTTTATCGTTGCGATAAATGTGATATAATTTATAAAACAGCGAGACTTTTGGCAAGTCACGTAAATAATAATCATGGAGGGGGGAAAAGATACAAATGTGCCCAATGTGGAAAGGAATATAATCAGTCGAAGTCCTTACAAAATCATATTTTGATTCACACTGGTGAAAAACCATTTAATTGCGAAATTTGTGAAATGACTTTTAGGACCAGGGAGTCTCGAAATCATCATCAGAGAAAACACACTGGGGAAAAACCTTATGAGTGTCCAGGATGCGATAAAACTTTTGCCACTGCTGGACAGAGAAGAGAACATAGAAGGAAAACTCATGAAGATGGAAACGAACTGCCTTGTCCTGAATGTGGTAAAATTTGCTTTGGCGAACGCGGAGTTCGTAGCCATTTGACTATTCACTCAATTGAGAAGCGCAAAATGCTAACTTTGAATTAA
Protein Sequence: DETRRFPVTVEDANFSLKTNDTFEHFLFKLEENHLDIDSLLIKIKVESFRGKRHVEKYGTEYRIMEFALSDSNECEGILHEDSSTQSQDSKVCRLCGMNTTNSVEIFSKKDPVAQKLDYVLPINVFKEDNVPVIVCKNCCTKINVLSEFTNQCLQNEQKLLEVATLLSSTENELVETKKDDAKLQLKQTFPHFYTNLLIPQNNESFNFQNELQFSLCDDNASNLELENIINEAISLNLESESILNDITTLNLETDTILNDFSNSNPKCDDILNEATPLNVKGSKSISEVSKPLHEISKPIFEESKEVCTASKPILDQELEIQCTRIESLSSVKLTDIEIMDDLNNGVNLEKKSIKTKKRSLKVKKKRKSKLGFLKSKKQRKEIIDSFQNEKKDLQCFLCNLEFLSPDQYLFHLEQHKNRNIKQFTCQKCKMDLSTEDDLWQHCENFCLPGKITSLEEASDFIAEDKLTCEICQAIFIQKKKYDFHMQFHAKGDLDVLKCPQCNKIFQTETVLWDHYQIEHKHFSCVGCDRIFRRKASLDYHLKISGHSNVKKNLEEEKIKITDSSKSKLLITCAKCGARYRHQERYEFHVKRHELGKINQFICTECEKEFTNENVLWDHYQYTHRKTECFNCLTCGKVFLKQYLLNKHQLKFKHEGTKIEVESKSNNQRFPVEKNGMNSQIKDAVPPKFMDCVICGKPVSNFDTDSLNDVVTCAKCKTPGLSLQVDSDGAKVLSRREYHCNLCYKHFSTKDRLEYHIMRHSENMDEFICSNCGKKLSTEQALFEHHLFVHKGARPHVCDLCGKSYQFRTRLREHMRTHSGERPFTCEFCGQDFMTNNSLRSHVKTHLDDKKFLCQLCSKLFRRQQDLNEHLERHWKNDKSLNLSRFFHCENCSEFFPTIRVLKTHLKEHHGIENGDLTDLHPWFECEDCPEKFKHQMSLKSHREKVHKGKTKPVYRCDKCDIIYKTARLLASHVNNNHGGGKRYKCAQCGKEYNQSKSLQNHILIHTGEKPFNCEICEMTFRTRESRNHHQRKHTGEKPYECPGCDKTFATAGQRREHRRKTHEDGNELPCPECGKICFGERGVRSHLTIHSIEKRKMLTLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01392220;
90% Identity: iTF_01393734;
80% Identity: -