Basic Information

Insect: Synergus laeviventris
Gene Symbol: -
Assembly: GCA_032275145.1
Location: JAUESI010000008.1:5402429-5406099[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.13 18 6.7 0.2 1 19 360 378 360 378 0.98

2 19 9.9 1.3e+03 0.9 0.4 2 23 404 425 403 425 0.79

3 19 0.0015 0.21 12.8 0.9 2 23 434 456 433 456 0.96

4 19 0.00044 0.059 14.6 0.3 2 23 460 483 459 483 0.89

5 19 0.33 44 5.5 0.8 2 23 508 529 507 529 0.92

6 19 0.0019 0.26 12.5 0.4 1 23 537 560 537 560 0.95

7 19 5.5e-05 0.0075 17.4 2.4 1 23 566 590 566 590 0.91

8 19 0.19 26 6.3 8.1 1 23 674 696 674 696 0.98

9 19 0.0044 0.6 11.4 1.3 1 23 703 726 703 726 0.92

10 19 0.00011 0.015 16.4 3.1 1 23 732 754 732 754 0.98

11 19 4.8e-05 0.0065 17.6 0.4 1 23 760 782 760 782 0.97

12 19 0.00067 0.091 14.0 1.3 1 23 788 810 788 810 0.95

13 19 0.098 13 7.2 3.8 1 23 823 845 823 846 0.95

14 19 3.6e-05 0.0049 18.0 1.9 1 23 860 883 860 883 0.96

15 19 0.00055 0.075 14.2 0.3 1 23 891 914 891 914 0.96

16 19 0.00011 0.015 16.4 0.5 1 23 920 942 920 942 0.98

17 19 0.00043 0.059 14.6 4.3 1 23 948 970 948 970 0.98

18 19 3.1e-06 0.00042 21.3 0.8 1 23 976 999 976 999 0.98

19 19 0.068 9.2 7.7 0.2 2 23 1006 1027 1005 1027 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.13	18	6.7	0.2	1	19	360	378	360	378	0.98
2	19	9.9	1.3e+03	0.9	0.4	2	23	404	425	403	425	0.79
3	19	0.0015	0.21	12.8	0.9	2	23	434	456	433	456	0.96
4	19	0.00044	0.059	14.6	0.3	2	23	460	483	459	483	0.89
5	19	0.33	44	5.5	0.8	2	23	508	529	507	529	0.92
6	19	0.0019	0.26	12.5	0.4	1	23	537	560	537	560	0.95
7	19	5.5e-05	0.0075	17.4	2.4	1	23	566	590	566	590	0.91
8	19	0.19	26	6.3	8.1	1	23	674	696	674	696	0.98
9	19	0.0044	0.6	11.4	1.3	1	23	703	726	703	726	0.92
10	19	0.00011	0.015	16.4	3.1	1	23	732	754	732	754	0.98
11	19	4.8e-05	0.0065	17.6	0.4	1	23	760	782	760	782	0.97
12	19	0.00067	0.091	14.0	1.3	1	23	788	810	788	810	0.95
13	19	0.098	13	7.2	3.8	1	23	823	845	823	846	0.95
14	19	3.6e-05	0.0049	18.0	1.9	1	23	860	883	860	883	0.96
15	19	0.00055	0.075	14.2	0.3	1	23	891	914	891	914	0.96
16	19	0.00011	0.015	16.4	0.5	1	23	920	942	920	942	0.98
17	19	0.00043	0.059	14.6	4.3	1	23	948	970	948	970	0.98
18	19	3.1e-06	0.00042	21.3	0.8	1	23	976	999	976	999	0.98
19	19	0.068	9.2	7.7	0.2	2	23	1006	1027	1005	1027	0.94

Sequence Information

Coding Sequence: ATGGAATTTGCGTTATTAGACAGCAATAAATGCGAAGGACTATTGCATAAAGATTCATCGCCTAAATCGCAAGATTGCCAAGTATGTAGGTTGTGTGGCATGAATACCACTAATTCAgttgaatattttagtaaaaaagatCCTATTGCACAAAAACTAAGTTACATTCTGCCAATAAATATTTTCGAAGAAGATAATGTTCTAGTCATTGTTTGTAAAAAGTGTTGCACAAAAATCAACGATCTTAGCGAATTTGCGAATCAGTGTTTACAGAATGAACAAAAGCTTTTAGGAGTTAGAACCATGTTATCTTCTACAGAAATAGAACGTGTCGAAGCAAAGAAAGATGCTGCAAAATTACAGTTGAAACAATCATGTCCACAGTTTTATGCGGACTTATTTATTCCGCAGAATAATGAATcactaaattttcaaaatgagctTCCGCTCTCATTATGCGACGATAACGCCTCAAATTtagaattggaaaatattattaacgaagctatttctttgaatctaGAATCGGAGAGCATTTTAAACGACATAACAACTTTGAATTTAGAAACCGATACAATCTTAAATGATTTGGACAACTCAAATCCGAAATGCGATGATATTTCAAACGAAGCAACCCCTTTAAATGCAAAAGggttaaaatcaatttctgaAGTTTCAAAACGACTTCATGAAATATCAAAAccaatttttgaagaatcaaatgaaatttacacAGCATCAAAACCAATTTTAGATAAAGAACTTGAAATTCAATGCATGAggattgaaagtttaaatagTGTAAAACTGATTGATTTAGAGTTAATGGATGATCTCAACAATGgggtaaaaatagagaaaagttCGTTTAAGACAAAAAAGCAAAAGTTGAAAGTGAAGAATAAAAGGAAATCGAAGTTCGAATTTCCTAAATCAAAAAAACAACGTGAAGAGATTATTGACTCTTttcaaaatgagaaaaaagacTTGCAATGCTTTTTATgcaatttagaatttctttcGCGAGATCgttatctttttcatttagaGCAGCATAAAAATCGAAACATAAAACAATTTACTTGCCAGAAATGCAAAATGGATTTGAGCACTGAAGATGATTTGTGGCAGCACTGTGAAAATGACTGTCTTCCAGGTAAAATTACAAGTTTAGAGGAAGCTTCTGATTTTAATGCAGAAGATAAATTAACTTGTGAGATTTGCCAAGCATTGTTTATTCAGAAGGAGAGATATGACTTTCATATGCAGTTCCATGAAAAGGGAGATTTTGATGTTTTAAGATGTCCCCaatgcaataaaatatacCAAACCGAAACCCTCCTCTGGGATCATCACCAGACTGAGCACAAATGTGTTTCATGTTTTGGatgtgacaaaatatttagaagGAAAGCGAGTTTGGattatcatttgaaaatatcagGTCATTCAAATGTGcagaaaaatttagaagaggagaaaatcaaaataacGGATTCGTGTAAGTCAAAACTATTGATAACTTGTGCCAAATGCGGAGCTCGATATCGTCGCCAGGAAAGATATGAATTCCATGTGAAAAGACacgaattagaaaaaataaacctATTTATTTGCACAGAATGTGAGAAAGAATTCACGAATGAAAACGTCTTATGGGATCATTACCAGTATACACACAGAAAAACCGAATGTTTTAAGTGTTTAACTTGCGGAAAAGTTTTTCCAAAGcagtttcttttaaataaacaccAACTCAAGTTCAAACATGAGGGCACAAAAATCGAGGTTGAATCAAAGAGCAAGAATCAATgTTCTCCAGTGGAGAAAAATAGAATGAATTCTGAAAACAAAGATACCGTCCAACCTAAGCATCTGGATTGCGTTCTTTGCGGAGAACCAGTATCAAATTTTGATCCCAATTCTCTGAATGACGTAGTAACTTGTGCCAAATGTAATACACCTGGACTCTCTTTACAAGTCGATTCTGATGGTGCCAAAGTACTTTCCCGTCGAGAATATCATTGCAATTTATGTCACAAACATTTCTTGACTAAAGATAGATTAGAGTATCATATAATGCGTCATTCGGAAAATATGGATGAATTTATTTGCAGTAAATGCGGCAAAAGACTCAGTACCGAACAGGCACTTTTTGAGCATCATCTTTTCGTTCATAAAGGGGCAAGACCTCATGTCTGTGAATTATGTGgtAAATCTTACCAGTTTCGAACGAGGCTCAGGGAACATATGAGAACCCACAGTGGTGAAAGACCTTTCGCGTGCGAAGTTTGTGGCCAGGATTTCATGACAAACAACTCGTTACGCTCTCATGTAAAAACCCACCTCGACGATAAGAAATTTCTTTGTCAACTCTGTTCAAAGCTCTTTCGACGTCAGCAAGACCTTAACGATCACCTGGAACGTCACTGGAAGAACGACAAATCCCTAAACTTATCCAGATTCTTTCACTGCGAAAATTGTTCCGAATTTTTTCCGACTATTCGCGTTTTAAAAACCCATTTAAAAGAGCACCATGGAATTGAAAATGGAGATCTCACTGATCTCCAACCTTGGTTCGAGTGTGAAGACTGTCCAGAGAAATTCAAGCACCAAATGTCCTTGAAATCTCATAGAGAAAAAGTCCATAAAGGGAAAACCAAACCCATTTATCGCTGCGATAAATgtgatataatttataaaacggCGAGACTCTTGGCAAGTCacgtaaataataatcatgGAGGGGGGAAAAGATACAAATGTGCCCAATGTGCAAAAGAATATAATCAGTCAAAGTCCTTACAAAATCATATTTTGATTCACACTGGTGAAAAACCATTTAATTGCGAAATTTGTGAGATGACTTTTAGGACCAGGGAGTCTCGAAATCATCATCAGAGAAAACACACAGGGGAAAAACCTTATAAATGTCCAGGATGCGATAAAACTTTTGCCACTGCTGGACAGAGAAGAGAACATAGAAGGAAAACGCATGAAGATGGAAACGAACTGCCCTGTCCTGAATGTGGTAAAATTTGCTTTGGCGAACGCGGAGTTCGTAGTCATTTGAGTATTCATTCAATTGAGAAGCGCAAGATGCTagctttgaattaa
Protein Sequence: MEFALLDSNKCEGLLHKDSSPKSQDCQVCRLCGMNTTNSVEYFSKKDPIAQKLSYILPINIFEEDNVLVIVCKKCCTKINDLSEFANQCLQNEQKLLGVRTMLSSTEIERVEAKKDAAKLQLKQSCPQFYADLFIPQNNESLNFQNELPLSLCDDNASNLELENIINEAISLNLESESILNDITTLNLETDTILNDLDNSNPKCDDISNEATPLNAKGLKSISEVSKRLHEISKPIFEESNEIYTASKPILDKELEIQCMRIESLNSVKLIDLELMDDLNNGVKIEKSSFKTKKQKLKVKNKRKSKFEFPKSKKQREEIIDSFQNEKKDLQCFLCNLEFLSRDRYLFHLEQHKNRNIKQFTCQKCKMDLSTEDDLWQHCENDCLPGKITSLEEASDFNAEDKLTCEICQALFIQKERYDFHMQFHEKGDFDVLRCPQCNKIYQTETLLWDHHQTEHKCVSCFGCDKIFRRKASLDYHLKISGHSNVQKNLEEEKIKITDSCKSKLLITCAKCGARYRRQERYEFHVKRHELEKINLFICTECEKEFTNENVLWDHYQYTHRKTECFKCLTCGKVFPKQFLLNKHQLKFKHEGTKIEVESKSKNQCSPVEKNRMNSENKDTVQPKHLDCVLCGEPVSNFDPNSLNDVVTCAKCNTPGLSLQVDSDGAKVLSRREYHCNLCHKHFLTKDRLEYHIMRHSENMDEFICSKCGKRLSTEQALFEHHLFVHKGARPHVCELCGKSYQFRTRLREHMRTHSGERPFACEVCGQDFMTNNSLRSHVKTHLDDKKFLCQLCSKLFRRQQDLNDHLERHWKNDKSLNLSRFFHCENCSEFFPTIRVLKTHLKEHHGIENGDLTDLQPWFECEDCPEKFKHQMSLKSHREKVHKGKTKPIYRCDKCDIIYKTARLLASHVNNNHGGGKRYKCAQCAKEYNQSKSLQNHILIHTGEKPFNCEICEMTFRTRESRNHHQRKHTGEKPYKCPGCDKTFATAGQRREHRRKTHEDGNELPCPECGKICFGERGVRSHLSIHSIEKRKMLALN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01392220;
90% Identity: iTF_01393734;
80% Identity: -