Basic Information

Insect: Synergus magnus
Gene Symbol: Sall1
Assembly: GCA_032275165.1
Location: JAUESH010000008.1:2772512-2775360[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.4e-05 0.0018 19.4 3.4 1 23 16 38 16 38 0.99

2 17 0.00057 0.075 14.3 1.4 1 23 44 66 44 66 0.96

3 17 0.00018 0.023 15.9 5.2 1 23 72 94 72 95 0.96

4 17 0.0018 0.23 12.7 4.7 1 23 108 130 108 130 0.97

5 17 0.00015 0.02 16.1 1.2 2 23 139 160 138 160 0.97

6 17 7.6e-08 9.9e-06 26.5 0.1 3 23 168 188 166 188 0.97

7 17 2.2e-06 0.00029 21.9 0.4 1 21 194 214 194 219 0.94

8 17 0.21 27 6.2 1.0 2 23 250 272 249 272 0.96

9 17 2.8e-06 0.00037 21.6 0.9 1 23 278 301 278 301 0.98

10 17 0.12 15 7.0 0.2 2 23 307 329 306 329 0.96

11 17 0.0091 1.2 10.5 0.1 1 23 334 356 334 356 0.97

12 17 0.036 4.7 8.6 2.6 1 23 362 385 362 385 0.89

13 17 8.1e-06 0.0011 20.1 2.2 1 23 403 426 403 426 0.96

14 17 0.00044 0.058 14.7 0.1 1 23 437 459 437 459 0.96

15 17 0.0061 0.8 11.1 3.6 1 23 465 487 465 487 0.95

16 17 4.6e-07 6e-05 24.0 1.1 1 23 493 515 493 515 0.98

17 17 0.00032 0.042 15.1 0.2 1 21 521 541 521 542 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.4e-05	0.0018	19.4	3.4	1	23	16	38	16	38	0.99
2	17	0.00057	0.075	14.3	1.4	1	23	44	66	44	66	0.96
3	17	0.00018	0.023	15.9	5.2	1	23	72	94	72	95	0.96
4	17	0.0018	0.23	12.7	4.7	1	23	108	130	108	130	0.97
5	17	0.00015	0.02	16.1	1.2	2	23	139	160	138	160	0.97
6	17	7.6e-08	9.9e-06	26.5	0.1	3	23	168	188	166	188	0.97
7	17	2.2e-06	0.00029	21.9	0.4	1	21	194	214	194	219	0.94
8	17	0.21	27	6.2	1.0	2	23	250	272	249	272	0.96
9	17	2.8e-06	0.00037	21.6	0.9	1	23	278	301	278	301	0.98
10	17	0.12	15	7.0	0.2	2	23	307	329	306	329	0.96
11	17	0.0091	1.2	10.5	0.1	1	23	334	356	334	356	0.97
12	17	0.036	4.7	8.6	2.6	1	23	362	385	362	385	0.89
13	17	8.1e-06	0.0011	20.1	2.2	1	23	403	426	403	426	0.96
14	17	0.00044	0.058	14.7	0.1	1	23	437	459	437	459	0.96
15	17	0.0061	0.8	11.1	3.6	1	23	465	487	465	487	0.95
16	17	4.6e-07	6e-05	24.0	1.1	1	23	493	515	493	515	0.98
17	17	0.00032	0.042	15.1	0.2	1	21	521	541	521	542	0.93

Sequence Information

Coding Sequence: ATGAATATTGCTCGACACAAATTGCTCCACACAGGTGTAAAAAGATACACTTGTGATATTTGCGATTATGCCTGTTACCAGAAAACGAATCTTGAATATCATCAACGAAGGCACTCGAAAgactattttttcttttgcgaGATATGCagaaaaggatttcatcagaaaaAAGAACTCATAGAACATGGAAATGTGCATGCTGGTCTGAAACCATATCAATGTAAATGTTGTGACAAGTCTTACCCATATAAGAAAAATCTGGTGTCTCATATCCGAATTCATCATCCTGAAACGACAAGAACAAGGACGAGAagctataaatataaatgtcaattttgtaaggaaagatttttcaataaaaaattacttcaacAACATTCGAAATTACATAAGAGTTTTCCGGAGAATTCAAAGGTATGCGATTTGTGTGGTCTGCAGTTATCTTCAAGAAGTGCACTTACTCATCATCTGAAGACACATACTGGAGAGAAATCGATCATCTGTAATATTTGTGGAAAGGGTTTTGCTAAGTGGGATAATTTGAAGGTTCATCAGCGAATACACACAGGAGAAAAGCCATTTATTTGCTCGCAGTGTGGTAAAgctttttctcaaaaatcaaCACTTGTTCTTCATCTGAGAAACTGGATGAACCATGTTGAACTTCAAGGTGTTGGCGAATACAAGGTCAAGTTAGAGGAGACACTCGAAAATTCAGACCATAAATTCGAGAACAGTGGTGAAAAGTCCTGTGAATTTTGTGAGGAGAAGTTCCACTTCGTCACCAGATTAGTGGCACACCTACGTATAGTTCACGGAATTCTCAGGCCCTTCAAGTGTGATAGCTGTGGGAAAACGTATCCTCAGCAATTCATGTTGAACGCCCACATTAAAAAATCCCATACACCTAAAATAGTGCCTTGCAATCAATGTGACTTCATGGGAGTCTCAAAAGCAGATGTAGACAGACACAGAAAAAGATTACACAAGGAGGTGAAGTACATCTGTGAAATCTGCAGTGAAGTCTTCCTCACTGAAGAATTATTGATGACACATACGACCATGCACGAATTTATGCAGTTCCATCAGTGCAACGCATGTGGGAGTACTTTTGATGATCTCTATAGTCTCAGGGAACATAATCATCTTTATCATTATAATGTGAATTTAGGAATAGCAAAACAAACCGAGGACCAACCACCACAACACAAATGTGATATTTGTggcaaaatttataaatatcgaTCTATGTTAAAGCAACATACAATAAAGGGTCATTCAGACCCTGTTGCCTGTGAGAGGCGGAGATATCTTTGCGCTCTTTGTGGAAAAGAACTAAAAACTGCTAAAGGTTTAGAGATACACACGAGGTCGCATACTGGGGAGAAGCCATATACTTGCGAAGTTTGTGGAAAATGCTTTGCTTGCGAAACTTTATTAAGAACCCATAGTGTGACCCATACGggagaaagaaaatattcctGTGATCAATGCGGCAAAGCTTTTACGCAGAGGTCAACTCTTGTTGTTCATAAAAGGTACCATAGTGGGGAAAGACCTTATCTTTGTCCTCGATGTGGTAAAGGCTTTGTTACGAGAACTGTACTTAATACTCATTTAAAATCGTGTCGCTGA
Protein Sequence: MNIARHKLLHTGVKRYTCDICDYACYQKTNLEYHQRRHSKDYFFFCEICRKGFHQKKELIEHGNVHAGLKPYQCKCCDKSYPYKKNLVSHIRIHHPETTRTRTRSYKYKCQFCKERFFNKKLLQQHSKLHKSFPENSKVCDLCGLQLSSRSALTHHLKTHTGEKSIICNICGKGFAKWDNLKVHQRIHTGEKPFICSQCGKAFSQKSTLVLHLRNWMNHVELQGVGEYKVKLEETLENSDHKFENSGEKSCEFCEEKFHFVTRLVAHLRIVHGILRPFKCDSCGKTYPQQFMLNAHIKKSHTPKIVPCNQCDFMGVSKADVDRHRKRLHKEVKYICEICSEVFLTEELLMTHTTMHEFMQFHQCNACGSTFDDLYSLREHNHLYHYNVNLGIAKQTEDQPPQHKCDICGKIYKYRSMLKQHTIKGHSDPVACERRRYLCALCGKELKTAKGLEIHTRSHTGEKPYTCEVCGKCFACETLLRTHSVTHTGERKYSCDQCGKAFTQRSTLVVHKRYHSGERPYLCPRCGKGFVTRTVLNTHLKSCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01394550;
90% Identity: iTF_01392198;
80% Identity: -