Basic Information

Insect: Synergus magnus
Gene Symbol: spop
Assembly: GCA_032275165.1
Location: JAUESH010000045.1:56497-58817[-]

Transcription Factor Domain

TF Family: BTB
Domain: zf-C2H2|ZBTB
PFAM: PF00651
TF Group: Zinc-Coordinating Group
Description: The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 0.00011 0.044 14.7 0.0 4 50 164 212 161 229 0.81

2 3 1.5e-09 5.9e-07 30.4 0.1 50 108 245 302 230 304 0.88

3 3 2.4 9.3e+02 0.8 0.0 78 106 304 332 302 336 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	0.00011	0.044	14.7	0.0	4	50	164	212	161	229	0.81
2	3	1.5e-09	5.9e-07	30.4	0.1	50	108	245	302	230	304	0.88
3	3	2.4	9.3e+02	0.8	0.0	78	106	304	332	302	336	0.82

Sequence Information

Coding Sequence: ATGGAGCTGCTAGTGCCAACTGTTTcggatataatttttaaatacacttgGCCAATTTCTCGTTACAAAAAAACAATATCCAAAAGCAGTTGCATTGATAGTCAGCCTTTCCATATCAACGTGAATGGAATTCACAGTACCTGGACTCTTTCGATTCGATTTTGGAAAGGACCTgaagGAAAAAGAATAACGAATCCGGTAGTTTTATGTCTAAATATGTTAAATTGTACAGTAGAAGAAACAGAGCAAGCAAAAATCAGGTTTCAATTTGGCGTTTTCAATGCAGACGTCAATCACTGGGAATACTGTCACGTTAGTAGAAcgatattagaattaaaatcgACGTCAGACATAATATCTCTCGGATACAGAGACTTGTCAATAGTCGAGAggcatttgaagaaaaatggcGAAGTCATAGTGATGgtgaaaatacaaataatcCAATGCGAAAGCGAAAAACATTCTCTAGCTCAGGATATGGCGAGACTTTTAAAGCACACACGAGCTGCGGATACAAAATTGTTGTGTGGCGGTACAAATAATACAGAAATTCCAGTTCACAGCAGCATAATCACAGCTCGTAGTACAGTTTTAGCAAATATGATATCGCCTTTGGTGGAGCAAGACTCGGAAACGGAATCAAATTCGAAGACAAGGGAAAATAGTGAAACTGAATCTCAAACGAAGAATCTAGAAGAGGAACAAAATGGAAATTTGGGCACTCAGATGAAATTCAAACTGGAGTTGCAAGACCTATCGAAAGAAGTTGCAGATGAACTTCTGCGGTATATTTATAGCGACCATGTTGATAATCTGGACAGCCTGGCTCCACAATTACTATTTCTGGCAGGACGTTTTCATTTACAAGGACTAAAAGAGCTTTGCGAAAGAAACCTGATTGAGACGATAACACCAGAAAACGTCGCTACTCGACTTTTGGTAGCAGATGATTATGGTTGTGAGGCACTAAAGAGGGCAGGTTTGGCATATTGTGAAGAAAATGCAATGAGTATAACGAAAAATCTCGCCTGGAAGATGATGGAGCAAGTTAATCCTGAACTCTTTCTTGAAGTCTGTGAAGCTGGAATGGGAGGGTCGCTTTCTAGCAACATGGACGATAGCGAATTAAgcaattga
Protein Sequence: MELLVPTVSDIIFKYTWPISRYKKTISKSSCIDSQPFHINVNGIHSTWTLSIRFWKGPEGKRITNPVVLCLNMLNCTVEETEQAKIRFQFGVFNADVNHWEYCHVSRTILELKSTSDIISLGYRDLSIVERHLKKNGEVIVMVKIQIIQCESEKHSLAQDMARLLKHTRAADTKLLCGGTNNTEIPVHSSIITARSTVLANMISPLVEQDSETESNSKTRENSETESQTKNLEEEQNGNLGTQMKFKLELQDLSKEVADELLRYIYSDHVDNLDSLAPQLLFLAGRFHLQGLKELCERNLIETITPENVATRLLVADDYGCEALKRAGLAYCEENAMSITKNLAWKMMEQVNPELFLEVCEAGMGGSLSSNMDDSELSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01394507; iTF_01392172; iTF_01389613; iTF_00980307; iTF_01390483; iTF_00880628; iTF_01391350; iTF_00200954; iTF_00089758; iTF_00460958; iTF_01392928; iTF_00676922; iTF_00881434; iTF_00882336; iTF_00883199;
90% Identity: iTF_00089758;
80% Identity: -