Aque029569.1
Basic Information
- Insect
- Andricus quercuspetiolicola
- Gene Symbol
- -
- Assembly
- GCA_035222095.1
- Location
- JAWWEA010000123.1:40706930-40719043[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00037 0.24 13.8 0.0 3 50 163 212 161 224 0.84 2 2 1.4e-09 9.3e-07 31.2 0.1 47 108 241 302 229 304 0.86
Sequence Information
- Coding Sequence
- ATGGAGTTGCTAGTGCCAACAGTTTCggatatcatttttaaatatacctGGCCAATTTCTCGTTATAAGAAAACAATAGCTAAAAGTAGTTATATTGATAGTCAGCCTTTTCATATCAACGTAAATGGAATTCACAGCACCTGGACTCTTTCGATTCGATTTTGGAAGGGACCTGAaggaaaaagaataaaaaatccaGTAGTTTTATGCCTAAATATGGTAAAATGCTCAGTAGAAGAAACAGAACAAGCAAAAATCAGGTTTCAATTTGCCGTTTTCAATGCGGACGTAAATCACTGGGAATACTGCCATGTTAGTAGAACGATATTAGAATTAAAATCGACATCAGACATAATATCTCTAGGATACCGAGACTTGTCAATAGTCGAGAGGCATTTGAAGAAAAACGGCGAACTCGCGGTGAtggtaaaaatacaaataatccaATGTGAAAGCGAAAAGCATTCTCTGGCACAGgataTGTCAAGACTTTTGAAGCACACACGAGCTGCGGATACAAAATTGACATGTGGGGGTACAAATAGCACAGAAATTCCAGTCCACAGCAGCATCATCACAGCTCGTAGTTCAGTTTTAGCAAATATGATATCGCCTCTGATGGAGCAGGATTCGGAAACGGAATCAGGCTCAAAGACGAGGGAAAATAGTGAGACTGAATCTCAAAAAAAGCATCTAGGAGAGCAACAAAATGGAAATTCGGACacGCACCTGAAATTCAAACTCGAGTTGACAGACCTATCGAAAGAAGTCACAGATGAACTTCTCCGATATATTTACAGCGATCATGTTGATAATCTGGACACCCTGGCTCCACAATTACTATTTCTGGCAAGGCGTTTTCATTTACAAGgaCTAAAAGAGCTTTGCGAAAGAAACCTGATTGAAACGATAACACCGGAAAACGTCGCGACTCGACTTTTGTTATCAGATGATTTTGGTTGTGATGCGTTGAAGAGGGCAGGTTTGGCATACTGCGAAGAAAATGCAATGAGTATAACGAAAAATCTAGCCTGGAAGATGATGGAACAAGTTAATCCTGAACTTTTTCTCGAAGTGTGTGAAGCTGGAATGGGAGGCTCGCTTTCTAGCAACATGGACGATAGCGAATTAAGCAACTGA
- Protein Sequence
- MELLVPTVSDIIFKYTWPISRYKKTIAKSSYIDSQPFHINVNGIHSTWTLSIRFWKGPEGKRIKNPVVLCLNMVKCSVEETEQAKIRFQFAVFNADVNHWEYCHVSRTILELKSTSDIISLGYRDLSIVERHLKKNGELAVMVKIQIIQCESEKHSLAQDMSRLLKHTRAADTKLTCGGTNSTEIPVHSSIITARSSVLANMISPLMEQDSETESGSKTRENSETESQKKHLGEQQNGNSDTHLKFKLELTDLSKEVTDELLRYIYSDHVDNLDTLAPQLLFLARRFHLQGLKELCERNLIETITPENVATRLLLSDDFGCDALKRAGLAYCEENAMSITKNLAWKMMEQVNPELFLEVCEAGMGGSLSSNMDDSELSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01393697;
- 90% Identity
- iTF_00980307; iTF_00200954; iTF_01393697; iTF_01394507; iTF_01392172; iTF_01389613; iTF_01390483; iTF_01391350; iTF_00460958; iTF_01392928; iTF_00676922;
- 80% Identity
- -